iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pno-094955

Ensembl Protein ID

SNOT_06755

UniProt Accession

Q0UNA9; SEC13_PHANO

Genbank Protein ID

EAT85406.1

Protein Name

Protein transport protein SEC13

Genbank Nucleotide ID

CH445334

Gene Name

SEC13; SNOG_06755

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SNOG_06755	SNOT_06755	SNOT_06755

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-31	105.2	58	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+c+a+  +   ++l+s+s+Dg++ +W+
   Q: 58   GHEGPVWCVAWahPKygNILASSSYDGKVIIWR 90
           8***********9444699*************8 PP

Organism

Phaeosphaeria nodorum

Functional Description
(View)

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution (By similarity).

Protein Sequence
(Fasta)

MADNGQNVDL LSIEANEVQH DAVLDYYGRR LATCSSDKTI KIFEVEGDKH TLVETLRGHE 60
GPVWCVAWAH PKYGNILASS SYDGKVIIWR EQSSTWQKIY EVALHTASVN IVAWAPHEVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACA ACGGACAAAA CGTGGACCTG CTATCGATCG AAGCTAACGA GGTCCAGCAT 60
GATGCCGTGC TCGACTACTA TGGCAGACGG CTAGCGACGT GCTCTTCAGA CAAGACGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0968--Cytoplasmic vesicle
KW-0256--Endoplasmic reticulum
KW-0931--ER-Golgi transport
KW-0472--Membrane
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0811--Translocation
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030127--C:COPII vesicle coat
GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0031080--C:nuclear pore outer ring
GO:0035859--C:Seh1-associated complex
GO:0005198--F:structural molecule activity
GO:0090114--P:COPII-coated vesicle budding
GO:0051028--P:mRNA transport
GO:0031081--P:nuclear pore distribution
GO:0043547--P:positive regulation of GTPase activity
GO:1904263--P:positive regulation of TORC1 signaling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0015031--P:protein transport
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pno:SNOG_06755

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	51.69	3.00e-75	273.00
IUUC-Aml-001832	Ailuropoda melanoleuca	49.34	5.00e-79	285.00
IUUC-Atr-002914	Amborella trichopoda	50.33	2.00e-72	263.00
IUUC-Apl-003992	Anas platyrhynchos	52.41	2.00e-80	290.00
IUUC-Aca-005283	Anolis carolinensis	49.01	8.00e-79	285.00
IUUC-Aly-005654	Arabidopsis lyrata	50.00	8.00e-68	248.00
IUUC-Ath-006810	Arabidopsis thaliana	50.51	2.00e-69	253.00
IUUC-Ago-007827	Ashbya gossypii	55.33	5.00e-89	318.00
IUUC-Acl-008205	Aspergillus clavatus	69.05	2.00e-116	409.00
IUUC-Afl-008748	Aspergillus flavus	68.12	1.00e-117	413.00
IUUC-Afu-008791	Aspergillus fumigatus	68.58	1.00e-117	413.00
IUUC-Ani-009152	Aspergillus nidulans	68.46	1.00e-118	417.00
IUUC-Ang-009765	Aspergillus niger	68.79	5.00e-118	415.00
IUUC-Aor-009927	Aspergillus oryzae	69.05	3.00e-117	412.00
IUUC-Ate-010248	Aspergillus terreus	68.01	8.00e-117	411.00
IUUC-Ame-011478	Astyanax mexicanus	50.00	1.00e-80	290.00
IUUC-Bgr-012276	Blumeria graminis	69.13	3.00e-115	406.00
IUUC-Bta-012700	Bos taurus	49.34	1.00e-78	284.00
IUUC-Bci-013722	Botrytis cinerea	67.81	5.00e-112	395.00
IUUC-Bdi-014818	Brachypodium distachyon	52.03	3.00e-75	273.00
IUUC-Bol-015779	Brassica oleracea	50.34	7.00e-68	248.00
IUUC-Bra-017286	Brassica rapa	48.65	8.00e-68	248.00
IUUC-Cel-018479	Caenorhabditis elegans	43.31	2.00e-59	220.00
IUUC-Cja-019956	Callithrix jacchus	50.53	4.00e-74	269.00
IUUC-Cfa-020752	Canis familiaris	49.34	4.00e-79	286.00
IUUC-Cpo-021871	Cavia porcellus	49.67	2.00e-79	287.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	50.17	8.00e-76	275.00
IUUC-Csa-023393	Chlorocebus sabaeus	50.33	5.00e-80	289.00
IUUC-Cho-024786	Choloepus hoffmanni	57.14	2.00e-30	124.00
IUUC-Cin-025332	Ciona intestinalis	52.58	3.00e-80	289.00
IUUC-Csv-025926	Ciona savignyi	52.05	2.00e-79	286.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	69.69	6.00e-112	395.00
IUUC-Cne-027054	Cryptococcus neoformans	47.65	8.00e-73	265.00
IUUC-Cme-027165	Cyanidioschyzon merolae	36.54	1.00e-42	166.00
IUUC-Dre-027782	Danio rerio	50.99	8.00e-81	291.00
IUUC-Dno-029628	Dasypus novemcinctus	49.01	1.00e-78	284.00
IUUC-Dor-030650	Dipodomys ordii	49.36	7.00e-58	215.00
IUUC-Dse-031206	Dothistroma septosporum	67.46	2.00e-115	406.00
IUUC-Dme-031854	Drosophila melanogaster	48.29	2.00e-68	250.00
IUUC-Ete-032618	Echinops telfairi	32.78	1.00e-37	148.00
IUUC-Eca-033268	Equus caballus	49.67	3.00e-79	286.00
IUUC-Fca-035918	Felis catus	49.34	2.00e-79	287.00
IUUC-Fal-037551	Ficedula albicollis	52.07	4.00e-74	269.00
IUUC-Fox-037763	Fusarium oxysporum	71.38	5.00e-117	412.00
IUUC-Fso-038341	Fusarium solani	71.23	4.00e-117	412.00
IUUC-Gmo-038638	Gadus morhua	51.16	1.00e-80	291.00
IUUC-Ggr-039865	Gaeumannomyces graminis	66.78	3.00e-112	395.00
IUUC-Gga-040193	Gallus gallus	50.33	2.00e-80	290.00
IUUC-Gac-041337	Gasterosteus aculeatus	28.97	4.00e-28	117.00
IUUC-Gma-044311	Glycine max	51.74	2.00e-72	264.00
IUUC-Ggo-045252	Gorilla gorilla	50.33	4.00e-80	289.00
IUUC-Hsa-046565	Homo sapiens	50.33	5.00e-80	289.00
IUUC-Hvu-047835	Hordeum vulgare	51.69	4.00e-75	272.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	49.34	6.00e-79	285.00
IUUC-Kpa-049148	Komagataella pastoris	55.14	3.00e-88	316.00
IUUC-Lch-050421	Latimeria chalumnae	52.65	8.00e-82	295.00
IUUC-Lpe-051187	Leersia perrieri	50.84	1.00e-74	274.00
IUUC-Loc-052167	Lepisosteus oculatus	50.00	1.00e-81	294.00
IUUC-Lma-053250	Leptosphaeria maculans	93.38	5.00e-158	548.00
IUUC-Laf-054304	Loxodonta africana	49.01	1.00e-78	284.00
IUUC-Mcc-055519	Macaca mulatta	50.33	5.00e-80	289.00
IUUC-Meu-056439	Macropus eugenii	50.66	2.00e-80	290.00
IUUC-Mor-057241	Magnaporthe oryzae	69.10	6.00e-113	398.00
IUUC-Mpo-057373	Magnaporthe poae	60.34	1.00e-92	330.00
IUUC-Mtr-058412	Medicago truncatula	50.51	2.00e-70	257.00
IUUC-Mla-058966	Melampsora laricipopulina	48.33	3.00e-83	300.00
IUUC-Mga-060066	Meleagris gallopavo	52.41	2.00e-80	290.00
IUUC-Mvi-060290	Microbotryum violaceum	53.48	5.00e-86	311.00
IUUC-Mmr-060717	Microcebus murinus	49.34	3.00e-79	286.00
IUUC-Mdo-062496	Monodelphis domestica	50.33	4.00e-80	289.00
IUUC-Mmu-063490	Mus musculus	50.85	6.00e-79	285.00
IUUC-Mac-065307	Musa acuminata	52.63	5.00e-73	266.00
IUUC-Mpu-066601	Mustela putorius furo	49.34	4.00e-79	286.00
IUUC-Mlu-067501	Myotis lucifugus	49.34	6.00e-79	285.00
IUUC-Nfi-068360	Neosartorya fischeri	65.89	1.00e-95	340.00
IUUC-Ncr-068928	Neurospora crassa	69.76	4.00e-117	412.00
IUUC-Nle-069028	Nomascus leucogenys	50.00	7.00e-80	288.00
IUUC-Opr-070446	Ochotona princeps	51.72	1.00e-78	284.00
IUUC-Ont-071587	Oreochromis niloticus	50.66	8.00e-82	295.00
IUUC-Oan-073211	Ornithorhynchus anatinus	49.01	7.00e-79	285.00
IUUC-Ocu-074306	Oryctolagus cuniculus	50.00	1.00e-79	288.00
IUUC-Oba-075069	Oryza barthii	51.01	4.00e-74	269.00
IUUC-Obr-076667	Oryza brachyantha	51.69	2.00e-75	273.00
IUUC-Ogl-077208	Oryza glaberrima	51.01	4.00e-74	269.00
IUUC-Ogu-078513	Oryza glumaepatula	51.01	4.00e-74	269.00
IUUC-Oin-079094	Oryza indica	51.01	4.00e-74	269.00
IUUC-Olo-080473	Oryza longistaminata	51.01	4.00e-74	269.00
IUUC-Ome-081643	Oryza meridionalis	51.01	4.00e-74	269.00
IUUC-Oni-082589	Oryza nivara	51.01	4.00e-74	269.00
IUUC-Opu-083677	Oryza punctata	51.35	1.00e-74	271.00
IUUC-Oru-084537	Oryza rufipogon	51.01	4.00e-74	269.00
IUUC-Osa-085449	Oryza sativa	51.01	4.00e-74	269.00
IUUC-Ola-087226	Oryzias latipes	50.33	1.00e-80	291.00
IUUC-Olu-087893	Ostreococcus lucimarinus	47.74	8.00e-62	228.00
IUUC-Oga-088837	Otolemur garnettii	49.34	6.00e-79	285.00
IUUC-Oar-089594	Ovis aries	49.67	1.00e-78	284.00
IUUC-Ptr-091132	Pan troglodytes	50.33	5.00e-80	289.00
IUUC-Pan-092013	Papio anubis	29.28	2.00e-23	100.00
IUUC-Psi-093568	Pelodiscus sinensis	52.07	4.00e-80	289.00
IUUC-Pma-094756	Petromyzon marinus	64.44	8.00e-33	130.00
IUUC-Ppa-095835	Physcomitrella patens	51.19	2.00e-71	260.00
IUUC-Pfo-096063	Poecilia formosa	50.99	5.00e-81	292.00
IUUC-Pab-098674	Pongo abelii	50.00	2.00e-79	287.00
IUUC-Pop-099402	Populus trichocarpa	49.31	7.00e-69	251.00
IUUC-Pca-100824	Procavia capensis	38.21	1.00e-53	201.00
IUUC-Ppe-101278	Prunus persica	50.00	1.00e-69	254.00
IUUC-Pva-103161	Pteropus vampyrus	46.69	4.00e-73	266.00
IUUC-Pgr-103573	Puccinia graminis	50.64	1.00e-83	301.00
IUUC-Ptt-103700	Puccinia triticina	51.29	8.00e-81	291.00
IUUC-Pte-104267	Pyrenophora teres	86.24	3.00e-149	519.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	86.49	1.00e-140	490.00
IUUC-Rno-104833	Rattus norvegicus	49.34	6.00e-79	285.00
IUUC-Sce-106437	Saccharomyces cerevisiae	57.82	3.00e-87	313.00
IUUC-Sha-106611	Sarcophilus harrisii	50.66	2.00e-80	290.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	53.72	3.00e-86	309.00
IUUC-Spo-108362	Schizosaccharomyces pombe	55.36	1.00e-84	303.00
IUUC-Smo-108797	Selaginella moellendorffii	49.67	4.00e-71	259.00
IUUC-Sit-110132	Setaria italica	51.35	1.00e-74	270.00
IUUC-Sly-111852	Solanum lycopersicum	48.64	2.00e-68	250.00
IUUC-Stu-112195	Solanum tuberosum	48.98	9.00e-69	251.00
IUUC-Sar-113279	Sorex araneus	28.47	3.00e-21	94.40
IUUC-Sbi-114229	Sorghum bicolor	52.70	1.00e-76	277.00
IUUC-Sre-114898	Sporisorium reilianum	47.55	1.00e-79	288.00
IUUC-Ssc-115995	Sus scrofa	56.92	8.00e-43	164.00
IUUC-Tgu-116793	Taeniopygia guttata	50.00	3.00e-74	270.00
IUUC-Tru-117797	Takifugu rubripes	49.67	2.00e-80	290.00
IUUC-Tsy-118913	Tarsius syrichta	28.32	2.00e-19	88.60
IUUC-Tni-120366	Tetraodon nigroviridis	50.00	7.00e-81	291.00
IUUC-Tca-121068	Theobroma cacao	49.65	1.00e-68	251.00
IUUC-Tre-121899	Trichoderma reesei	70.51	1.00e-116	410.00
IUUC-Tvi-122380	Trichoderma virens	71.09	5.00e-117	412.00
IUUC-Tae-124286	Triticum aestivum	52.03	4.00e-75	273.00
IUUC-Tur-126202	Triticum urartu	51.69	5.00e-75	272.00
IUUC-Tme-127181	Tuber melanosporum	58.12	2.00e-101	360.00
IUUC-Ttr-128448	Tursiops truncatus	49.80	5.00e-63	233.00
IUUC-Uma-129661	Ustilago maydis	47.81	3.00e-81	293.00
IUUC-Vda-129666	Verticillium dahliae	70.38	1.00e-110	390.00
IUUC-Vpa-130318	Vicugna pacos	49.34	1.00e-78	285.00
IUUC-Vvi-130868	Vitis vinifera	50.52	9.00e-71	258.00
IUUC-Xtr-131859	Xenopus tropicalis	50.66	4.00e-81	292.00
IUUC-Xma-133898	Xiphophorus maculatus	51.32	7.00e-82	295.00
IUUC-Yli-134559	Yarrowia lipolytica	58.42	8.00e-93	331.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence