iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022745

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496133

Gene Name

CHLREDRAFT_158444

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_158444	EDP01748	EDP01748

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-07	31.3	197	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrtg 33
            a+ ++  +l+s+  Dgt+ vWD+r  
   Q: 197  TAWsPSgSFLASAHQDGTLAVWDMRAS 223
           479966699**************9875 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MEDRTYTLSQ TRYEVCTTIH HWQLRDLVSA GDSSDEMLCV CDSSVLHYNC ATREVTSVLS 60
LDWCPNSMTY AHGILAAGGP SSQLFVKDLR DKRVLHRDPL GGSVNNAVHI AKPNGRLMLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGACTCTC CGGTGGCCAG GGTAAGCCTG GTCACCCGTA AACAGTGGGC ATATTGCTGT 60
TGGTGAGGTG TTGCGCTCCT GCGCTCCGGG GCCGTAGAAG CGCAGCAGCA GCAGCAGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR019417--DUF2415
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF10313--DUF2415
PF00400--WD40

SMART

SM00320--WD40

KEGG

cre:CHLREDRAFT_158444

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	28.97	2.00e-24	105.00
IUUC-Atr-002734	Amborella trichopoda	28.79	3.00e-23	100.00
IUUC-Aly-006341	Arabidopsis lyrata	28.39	1.00e-20	92.40
IUUC-Ath-007672	Arabidopsis thaliana	28.06	4.00e-21	94.00
IUUC-Bdi-014720	Brachypodium distachyon	29.91	3.00e-26	111.00
IUUC-Bol-016081	Brassica oleracea	28.62	8.00e-23	99.80
IUUC-Bra-016993	Brassica rapa	28.30	1.00e-22	100.00
IUUC-Cme-027250	Cyanidioschyzon merolae	33.81	3.00e-23	102.00
IUUC-Dse-031456	Dothistroma septosporum	27.63	9.00e-12	62.80
IUUC-Gma-043838	Glycine max	27.75	1.00e-25	108.00
IUUC-Hvu-047718	Hordeum vulgare	31.88	3.00e-27	114.00
IUUC-Lpe-051175	Leersia perrieri	26.90	3.00e-24	103.00
IUUC-Mtr-058694	Medicago truncatula	27.73	1.00e-23	102.00
IUUC-Mvi-060306	Microbotryum violaceum	34.75	8.00e-13	67.00
IUUC-Mac-065482	Musa acuminata	29.06	3.00e-23	100.00
IUUC-Oba-075716	Oryza barthii	28.35	6.00e-22	97.10
IUUC-Obr-076195	Oryza brachyantha	27.81	5.00e-22	97.40
IUUC-Ogl-077272	Oryza glaberrima	28.22	1.00e-21	95.50
IUUC-Ogu-078133	Oryza glumaepatula	29.71	2.00e-22	98.20
IUUC-Oin-079991	Oryza indica	27.59	4.00e-22	97.40
IUUC-Olo-080659	Oryza longistaminata	28.19	2.00e-22	97.80
IUUC-Ome-081872	Oryza meridionalis	26.90	1.00e-21	95.50
IUUC-Oni-082850	Oryza nivara	29.71	4.00e-22	97.40
IUUC-Opu-083680	Oryza punctata	26.33	7.00e-22	96.70
IUUC-Oru-084444	Oryza rufipogon	27.59	4.00e-22	97.10
IUUC-Osa-086083	Oryza sativa	27.59	4.00e-22	97.40
IUUC-Pop-099666	Populus trichocarpa	27.49	4.00e-20	90.90
IUUC-Pte-104305	Pyrenophora teres	29.89	8.00e-13	67.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	29.89	1.00e-13	70.10
IUUC-Sja-107750	Schizosaccharomyces japonicus	26.83	2.00e-26	111.00
IUUC-Spo-108140	Schizosaccharomyces pombe	26.07	3.00e-11	61.20
IUUC-Smo-109570	Selaginella moellendorffii	26.83	1.00e-23	102.00
IUUC-Sit-110341	Setaria italica	28.04	1.00e-22	99.00
IUUC-Sly-111343	Solanum lycopersicum	28.66	9.00e-23	99.40
IUUC-Stu-111950	Solanum tuberosum	28.62	7.00e-24	103.00
IUUC-Sbi-114534	Sorghum bicolor	28.91	2.00e-24	104.00
IUUC-Tca-121187	Theobroma cacao	27.49	3.00e-21	94.70
IUUC-Tae-123332	Triticum aestivum	29.60	2.00e-24	105.00
IUUC-Tur-126211	Triticum urartu	29.36	1.00e-24	105.00
IUUC-Vvi-131311	Vitis vinifera	28.79	7.00e-25	106.00
IUUC-Zma-135672	Zea mays	28.66	5.00e-24	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence