iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114860

UUCD1 version

UUC-SoB-00038

Ensembl Protein ID

Sb01g036700.1

UniProt Accession

A0A1B6QNH6; A0A1B6QNH6_SORBI

Genbank Protein ID

KXG39475.1; KXG39476.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760; CM000760

Gene Name

SORBI_001G387000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g036700	Sb01g036700.1	Sb01g036700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-06	27.8	217	258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++     +  + +pC H fh +C+  w         + +CP+Cr
   Q: 217  CPVCLDEVaggGE-AREMPCSHRFHDQCILPW------LEMHSSCPVCR 258
           ********77544.899***************......9999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEEESGAASR YYCHMCSLII RPELGIEELK CPHCHTGFVE EMAGDRRGSD GAAIRGRAPA 60
DEASFNTSDA ALEREVSLWA PVLMDFIAAS SGRHGLDGGG GGDLAALARR QYRNIALLQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTGTTGC TTGCTTTCGT TCTCGTTCTC GTTCTCTCTC CCTGACCGAG GAAGACGAAT 60
CAGATTTGGA GATCGTGTGG AGAGCCTACA AGTGGCGCTT CTGGGCTCTG GGAGAAGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000341	Aegilops tauschii	59.56	1.00e-60	226.00
IUUC-Bdi-014633	Brachypodium distachyon	57.59	5.00e-54	203.00
IUUC-Lpe-050973	Leersia perrieri	45.06	3.00e-44	170.00
IUUC-Oba-075050	Oryza barthii	50.93	2.00e-58	218.00
IUUC-Obr-076733	Oryza brachyantha	62.07	2.00e-63	234.00
IUUC-Ogl-076976	Oryza glaberrima	50.93	2.00e-58	218.00
IUUC-Ogu-078625	Oryza glumaepatula	51.23	4.00e-59	220.00
IUUC-Oin-079394	Oryza indica	56.48	5.00e-59	220.00
IUUC-Olo-081010	Oryza longistaminata	62.39	2.00e-41	161.00
IUUC-Oni-082757	Oryza nivara	51.23	5.00e-59	220.00
IUUC-Opu-083666	Oryza punctata	57.05	6.00e-44	170.00
IUUC-Oru-084376	Oryza rufipogon	51.23	4.00e-59	221.00
IUUC-Osa-085717	Oryza sativa	51.23	7.00e-59	219.00
IUUC-Spo-108178	Schizosaccharomyces pombe	44.23	1.00e-09	58.20
IUUC-Sit-110378	Setaria italica	79.68	4.00e-88	317.00
IUUC-Tae-122915	Triticum aestivum	57.81	7.00e-60	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence