iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057744

Ensembl Protein ID

KEH29870

UniProt Accession

A0A072UVK7; A0A072UVK7_MEDTR

Genbank Protein ID

KEH29870.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g053675

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g053675	KEH29870	KEH29870

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-24	86.6	127	163
UBD/Beta-Prp	2.50e-41	143.2	11	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt++v +l++ +d  +l+sGs D+ti++W+++ g +
   Q: 127  GHTADVVDLNWsPDdSTLASGSLDNTIHIWNMSNGIC 163
           8***********77799**************998877 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl...............lrslsgheaevtavkfspdgkilvtgseDrtikvw.............. 79
           h+  +i ++++ p++  +atg+ d+++++w+++  ++               l++l +h + v++v++ ++g + ++gs+D++i +               
   Q: 11   HEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKFVSTdltndltndessqrlLATLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHerkpgsgttefgsg 111
           55567778999********************99988899************************************************99988888888888 PP
   S: 80   ...dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
              d+++ k  +tl+gh+++v++l++sp++++l+sGs d+ti++w++++g c   +l+gh+++v +v+++p g+ ++s s+D+tv +W+ +  +l ++  g
   Q: 112  eppDIENWKVAMTLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMSNGICTT-VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWKTSDWSLAHRTDG 211
           888888***********************************************9.*********************************9987777777665 PP

Organism

Medicago truncatula

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MIAEKPIWVR HEGMQIFSID VQPGGLRFAT GGGDHKVRIW NMKFVSTDLT NDLTNDESSQ 60
RLLATLRDHF GSVNCVRWAK HGRYVASGSD DQVILIHERK PGSGTTEFGS GEPPDIENWK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTAGGGGA CACATCTGAT TAAACTTGTT GAATCCAAAA GTCACTAACG ACTAACGAGT 60
ACGTTACCTC TCACTTCACA ATCACATCCA CCTTCTTTCT CTGTACTTTT TTCACTTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

mtr:MTR_4g053675

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	68.49	0.00e+00	1382.00
IUUC-Aml-001723	Ailuropoda melanoleuca	37.27	8.00e-81	295.00
IUUC-Atr-003132	Amborella trichopoda	69.59	0.00e+00	1382.00
IUUC-Apl-003197	Anas platyrhynchos	36.27	8.00e-80	291.00
IUUC-Aly-005446	Arabidopsis lyrata	72.00	0.00e+00	1363.00
IUUC-Ath-007627	Arabidopsis thaliana	69.87	0.00e+00	1354.00
IUUC-Afu-008781	Aspergillus fumigatus	34.00	6.00e-61	228.00
IUUC-Ani-009272	Aspergillus nidulans	28.88	2.00e-51	197.00
IUUC-Ang-009655	Aspergillus niger	30.58	2.00e-67	250.00
IUUC-Ate-010530	Aspergillus terreus	27.73	5.00e-52	199.00
IUUC-Bgr-012237	Blumeria graminis	34.61	8.00e-64	238.00
IUUC-Bta-013320	Bos taurus	36.53	7.00e-81	295.00
IUUC-Bdi-014075	Brachypodium distachyon	71.52	0.00e+00	1414.00
IUUC-Bol-016440	Brassica oleracea	72.26	0.00e+00	1355.00
IUUC-Bra-016651	Brassica rapa	68.50	0.00e+00	1326.00
IUUC-Cel-018692	Caenorhabditis elegans	28.03	7.00e-44	172.00
IUUC-Cja-018987	Callithrix jacchus	35.43	1.00e-73	270.00
IUUC-Cfa-020132	Canis familiaris	36.85	5.00e-81	295.00
IUUC-Cpo-021484	Cavia porcellus	37.67	4.00e-85	309.00
IUUC-Csa-023081	Chlorocebus sabaeus	37.48	4.00e-86	312.00
IUUC-Cin-025182	Ciona intestinalis	37.21	8.00e-84	305.00
IUUC-Csv-026154	Ciona savignyi	37.82	2.00e-86	313.00
IUUC-Cme-027349	Cyanidioschyzon merolae	24.53	9.00e-58	218.00
IUUC-Dno-029557	Dasypus novemcinctus	35.79	9.00e-68	251.00
IUUC-Dor-030687	Dipodomys ordii	37.57	2.00e-62	233.00
IUUC-Dme-031746	Drosophila melanogaster	36.58	3.00e-84	306.00
IUUC-Ete-032384	Echinops telfairi	33.47	5.00e-63	235.00
IUUC-Eca-033430	Equus caballus	37.68	2.00e-82	300.00
IUUC-Fca-036121	Felis catus	37.10	6.00e-82	298.00
IUUC-Fal-036817	Ficedula albicollis	35.87	5.00e-79	289.00
IUUC-Gga-040936	Gallus gallus	36.09	1.00e-84	307.00
IUUC-Gma-044252	Glycine max	81.75	0.00e+00	1687.00
IUUC-Ggo-045430	Gorilla gorilla	37.48	3.00e-86	313.00
IUUC-Hsa-046442	Homo sapiens	37.48	2.00e-86	313.00
IUUC-Hvu-047587	Hordeum vulgare	68.05	0.00e+00	1329.00
IUUC-Kpa-049145	Komagataella pastoris	32.15	8.00e-58	218.00
IUUC-Lch-050474	Latimeria chalumnae	35.34	4.00e-79	289.00
IUUC-Lpe-051209	Leersia perrieri	69.56	0.00e+00	1361.00
IUUC-Loc-052119	Lepisosteus oculatus	35.70	3.00e-79	289.00
IUUC-Laf-053718	Loxodonta africana	37.87	1.00e-85	311.00
IUUC-Mcc-055621	Macaca mulatta	36.01	1.00e-72	267.00
IUUC-Mla-058914	Melampsora laricipopulina	27.10	1.00e-81	297.00
IUUC-Mga-060181	Meleagris gallopavo	35.89	1.00e-80	294.00
IUUC-Mvi-060432	Microbotryum violaceum	32.24	2.00e-55	210.00
IUUC-Mmr-060871	Microcebus murinus	37.92	6.00e-87	315.00
IUUC-Mdo-062301	Monodelphis domestica	36.88	6.00e-84	305.00
IUUC-Mmu-063888	Mus musculus	36.69	8.00e-86	311.00
IUUC-Mac-064768	Musa acuminata	69.85	0.00e+00	1357.00
IUUC-Mpu-066732	Mustela putorius furo	37.88	6.00e-81	295.00
IUUC-Mlu-067542	Myotis lucifugus	36.76	2.00e-82	300.00
IUUC-Nfi-068396	Neosartorya fischeri	33.75	2.00e-60	227.00
IUUC-Nle-070156	Nomascus leucogenys	37.48	4.00e-86	312.00
IUUC-Ocu-074962	Oryctolagus cuniculus	37.47	7.00e-83	301.00
IUUC-Oba-075178	Oryza barthii	71.52	0.00e+00	1352.00
IUUC-Obr-076399	Oryza brachyantha	71.58	0.00e+00	1381.00
IUUC-Ogu-078797	Oryza glumaepatula	71.52	0.00e+00	1352.00
IUUC-Oin-080085	Oryza indica	71.12	0.00e+00	1273.00
IUUC-Olo-081048	Oryza longistaminata	88.54	1.00e-172	600.00
IUUC-Ome-081324	Oryza meridionalis	71.52	0.00e+00	1352.00
IUUC-Oni-082548	Oryza nivara	71.31	0.00e+00	1349.00
IUUC-Opu-084008	Oryza punctata	85.92	0.00e+00	771.00
IUUC-Oru-084339	Oryza rufipogon	71.52	0.00e+00	1352.00
IUUC-Osa-085782	Oryza sativa	71.52	0.00e+00	1352.00
IUUC-Olu-087611	Ostreococcus lucimarinus	35.76	1.00e-153	536.00
IUUC-Oga-087935	Otolemur garnettii	37.33	9.00e-82	298.00
IUUC-Oar-089229	Ovis aries	33.47	2.00e-64	240.00
IUUC-Ptr-090715	Pan troglodytes	37.48	2.00e-86	313.00
IUUC-Pan-092318	Papio anubis	36.54	2.00e-82	300.00
IUUC-Psi-094053	Pelodiscus sinensis	35.97	3.00e-81	296.00
IUUC-Ppa-095499	Physcomitrella patens	51.72	0.00e+00	940.00
IUUC-Pfo-096857	Poecilia formosa	33.81	1.00e-77	284.00
IUUC-Pab-098047	Pongo abelii	37.48	2.00e-86	313.00
IUUC-Pop-099587	Populus trichocarpa	75.10	0.00e+00	1541.00
IUUC-Pca-100558	Procavia capensis	47.21	6.00e-47	182.00
IUUC-Ppe-101261	Prunus persica	78.06	0.00e+00	1550.00
IUUC-Pva-102683	Pteropus vampyrus	37.18	1.00e-83	303.00
IUUC-Rno-105566	Rattus norvegicus	37.28	9.00e-86	311.00
IUUC-Sha-107514	Sarcophilus harrisii	33.73	4.00e-69	256.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	27.98	5.00e-85	308.00
IUUC-Spo-108162	Schizosaccharomyces pombe	33.01	7.00e-72	265.00
IUUC-Smo-109186	Selaginella moellendorffii	51.54	0.00e+00	913.00
IUUC-Sit-110730	Setaria italica	71.03	0.00e+00	1373.00
IUUC-Sly-111547	Solanum lycopersicum	76.00	0.00e+00	1451.00
IUUC-Stu-112705	Solanum tuberosum	75.61	0.00e+00	1447.00
IUUC-Sar-113222	Sorex araneus	36.07	5.00e-75	275.00
IUUC-Sbi-114272	Sorghum bicolor	72.31	0.00e+00	1372.00
IUUC-Sre-115061	Sporisorium reilianum	33.20	7.00e-71	261.00
IUUC-Ssc-116364	Sus scrofa	36.87	3.00e-82	299.00
IUUC-Tgu-116645	Taeniopygia guttata	36.27	6.00e-79	288.00
IUUC-Tru-117590	Takifugu rubripes	35.69	1.00e-84	307.00
IUUC-Tsy-119212	Tarsius syrichta	34.27	8.00e-68	251.00
IUUC-Tni-119915	Tetraodon nigroviridis	36.29	6.00e-84	305.00
IUUC-Tca-121765	Theobroma cacao	79.96	0.00e+00	1590.00
IUUC-Tae-123009	Triticum aestivum	66.07	0.00e+00	858.00
IUUC-Tur-126483	Triticum urartu	71.44	0.00e+00	1398.00
IUUC-Tme-127202	Tuber melanosporum	30.84	2.00e-47	184.00
IUUC-Ttr-129077	Tursiops truncatus	33.27	5.00e-72	265.00
IUUC-Uma-129465	Ustilago maydis	36.43	7.00e-72	265.00
IUUC-Vvi-131397	Vitis vinifera	74.43	0.00e+00	1553.00
IUUC-Xtr-132057	Xenopus tropicalis	36.88	7.00e-86	311.00
IUUC-Xma-134139	Xiphophorus maculatus	32.35	3.00e-66	245.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence