iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049292

Ensembl Protein ID

CAY68355

UniProt Accession

C4QYN1; C4QYN1_KOMPG

Genbank Protein ID

CAY68355.1

Protein Name

Protein involved in exosome mediated 3' to 5' mRNA degradation

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-4_0501

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-4_0501	CAY68355	CAY68355

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-18	61.8	258	292

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H+ + ++l+f +d  +l+sG+ D ++++WD++t  
   Q: 258  HERWCFSLDFnQDgSFLASGGMDQKVRIWDVTTRE 292
           99*********8889****************9966 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MGKQFISTQI IRGHKSDVYD VAVCSKFTVS VSGDGHIKTW SHKGEEEPVN DILVDSLGLH 60
HVDFWENDGI LIIGTVAFSG ILYLFQYIDN ELVPLNCELK KNNWALKFHV GVEDQKHRLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAAAAC AATTCATTTC CACTCAAATC ATCAGAGGGC ACAAATCTGA TGTCTATGAC 60
GTTGCCGTTT GCAGCAAATT TACCGTGTCC GTTTCTGGAG ACGGTCACAT AAAAACATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppa:PAS_chr1-4_0501

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007993	Ashbya gossypii	37.02	1.00e-57	214.00
IUUC-Acl-008297	Aspergillus clavatus	23.90	1.00e-18	85.50
IUUC-Afl-008528	Aspergillus flavus	24.73	6.00e-19	86.30
IUUC-Ani-009288	Aspergillus nidulans	25.86	5.00e-20	89.40
IUUC-Ang-009702	Aspergillus niger	25.82	5.00e-21	92.80
IUUC-Aor-009969	Aspergillus oryzae	24.45	2.00e-19	87.00
IUUC-Bgr-012189	Blumeria graminis	27.32	5.00e-24	102.00
IUUC-Bci-013644	Botrytis cinerea	25.60	2.00e-17	80.90
IUUC-Cgl-026446	Colletotrichum gloeosporioides	27.35	8.00e-25	105.00
IUUC-Dse-031348	Dothistroma septosporum	26.25	9.00e-22	95.10
IUUC-Fox-038047	Fusarium oxysporum	26.15	3.00e-20	90.10
IUUC-Fso-038168	Fusarium solani	25.94	3.00e-18	83.60
IUUC-Ggr-039743	Gaeumannomyces graminis	28.85	2.00e-11	61.20
IUUC-Lma-052992	Leptosphaeria maculans	23.64	2.00e-16	77.40
IUUC-Mor-056971	Magnaporthe oryzae	29.95	5.00e-17	79.30
IUUC-Mpo-057485	Magnaporthe poae	29.47	5.00e-12	62.80
IUUC-Nfi-068346	Neosartorya fischeri	25.42	7.00e-18	82.00
IUUC-Ncr-068641	Neurospora crassa	29.33	1.00e-11	61.60
IUUC-Pno-094832	Phaeosphaeria nodorum	25.42	2.00e-16	77.40
IUUC-Pte-104236	Pyrenophora teres	24.46	5.00e-19	86.30
IUUC-Pyt-104717	Pyrenophora triticirepentis	24.18	8.00e-19	85.50
IUUC-Sce-106363	Saccharomyces cerevisiae	38.40	2.00e-59	221.00
IUUC-Spo-108244	Schizosaccharomyces pombe	25.55	3.00e-19	87.00
IUUC-Tre-122038	Trichoderma reesei	23.77	1.00e-16	78.60
IUUC-Tvi-122302	Trichoderma virens	24.46	7.00e-18	82.40
IUUC-Tme-127066	Tuber melanosporum	27.40	3.00e-17	80.50
IUUC-Vda-129720	Verticillium dahliae	25.14	1.00e-14	72.00
IUUC-Yli-134554	Yarrowia lipolytica	27.35	8.00e-26	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence