iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108125

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

U3 small nucleolar RNA-associated protein 15; U3 protein 15 required for transcription

Genbank Nucleotide ID

CU329671

Gene Name

utp15; SPBC428.19c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPBC428.19c	SPBC428.19c.1	SPBC428.19c.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-28	96.0	164	195
UBD/Beta-Prp	7.70e-42	141.5	39	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           gH+d v+  ++ s t+lvsG++Dgti++WD+r
   Q: 164  GHEDYVRTASWmSATRLVSGGYDGTIRLWDTR 195
           8**********8669***************76 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
            s it+++fs ++++ ++    ++++++ +++ ++ +++   +++ ++ ++ +dgk+l+ g   ++++++dlst++++++l +h++ v  ++
   Q: 39   YSAITSIHFSAESPYDFAVTSGARVQIYGASSRSVKKTIARFKDTAYSGNIRKDGKLLLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQ 130
           5789*****9999997666679********************************************************************** PP
   S: 102  fspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           f+p+   +++sGs+d+t++vwdl+tg + +  lsgh++ v+++++++ +  lvsG++D+t+rlWd + 
   Q: 131  FCPYAnTTFLSGSDDKTVKVWDLSTGAVQY-DLSGHEDYVRTASWMS-ATRLVSGGYDGTIRLWDTRI 196
           ***665************************.9***************.999**************875 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs) (By similarity).

Protein Sequence
(Fasta)

MSAPAGRLQP QRFAALPNPV TAENKFWRSF KVPVVAKEYS AITSIHFSAE SPYDFAVTSG 60
ARVQIYGASS RSVKKTIARF KDTAYSGNIR KDGKLLLAGD ATGLVQIFDL STRSILRALD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATATTTAA TGTGATTTAA CTATCGTTCA GCGGTGCTGT TTAATTTGCC TTTGCCAACC 60
ACCAACACCA CCCACCCATT TGGTTAACTT TTTTCAGCAA CCACATATAC GGATATCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0804--Transcription
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0034455--C:t-UTP complex
GO:0030515--F:snoRNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0006351--P:transcription, DNA-templated

KEGG

spo:SPBC428.19c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002117	Ailuropoda melanoleuca	36.66	2.00e-82	297.00
IUUC-Atr-003068	Amborella trichopoda	31.90	2.00e-52	198.00
IUUC-Apl-003926	Anas platyrhynchos	37.82	8.00e-86	308.00
IUUC-Aca-004271	Anolis carolinensis	38.11	6.00e-85	305.00
IUUC-Aly-005525	Arabidopsis lyrata	30.89	3.00e-58	217.00
IUUC-Ath-006954	Arabidopsis thaliana	29.67	1.00e-57	215.00
IUUC-Ago-007973	Ashbya gossypii	35.29	4.00e-84	303.00
IUUC-Acl-008287	Aspergillus clavatus	34.99	3.00e-72	263.00
IUUC-Afl-008504	Aspergillus flavus	35.06	1.00e-88	318.00
IUUC-Afu-008983	Aspergillus fumigatus	35.11	2.00e-67	248.00
IUUC-Ani-009315	Aspergillus nidulans	35.78	3.00e-76	276.00
IUUC-Ang-009690	Aspergillus niger	35.54	8.00e-88	315.00
IUUC-Aor-010181	Aspergillus oryzae	35.06	1.00e-88	318.00
IUUC-Ate-010498	Aspergillus terreus	34.91	4.00e-81	293.00
IUUC-Ame-011814	Astyanax mexicanus	38.60	4.00e-89	320.00
IUUC-Bgr-012273	Blumeria graminis	37.29	8.00e-96	342.00
IUUC-Bta-013068	Bos taurus	36.94	7.00e-82	295.00
IUUC-Bci-013930	Botrytis cinerea	36.82	5.00e-94	336.00
IUUC-Bdi-014876	Brachypodium distachyon	27.90	8.00e-51	192.00
IUUC-Bol-015366	Brassica oleracea	30.04	2.00e-59	221.00
IUUC-Bra-017589	Brassica rapa	28.89	3.00e-58	217.00
IUUC-Cel-018159	Caenorhabditis elegans	23.88	1.00e-38	152.00
IUUC-Cja-019139	Callithrix jacchus	36.49	2.00e-80	291.00
IUUC-Cfa-020742	Canis familiaris	36.12	2.00e-80	291.00
IUUC-Cpo-021707	Cavia porcellus	37.14	2.00e-82	297.00
IUUC-Cre-022665	Chlamydomonas reinhardtii	37.53	1.00e-80	291.00
IUUC-Csa-023024	Chlorocebus sabaeus	36.53	6.00e-82	296.00
IUUC-Cho-024487	Choloepus hoffmanni	40.07	5.00e-53	199.00
IUUC-Cin-025294	Ciona intestinalis	37.86	4.00e-92	330.00
IUUC-Cgl-026388	Colletotrichum gloeosporioides	33.53	1.00e-71	261.00
IUUC-Cne-026945	Cryptococcus neoformans	42.89	4.00e-95	340.00
IUUC-Cme-027108	Cyanidioschyzon merolae	29.86	1.00e-49	188.00
IUUC-Dre-028316	Danio rerio	38.21	8.00e-89	318.00
IUUC-Dno-028985	Dasypus novemcinctus	36.94	2.00e-82	298.00
IUUC-Dor-030219	Dipodomys ordii	32.41	4.00e-34	136.00
IUUC-Dse-031495	Dothistroma septosporum	31.05	9.00e-67	245.00
IUUC-Dme-031769	Drosophila melanogaster	33.87	5.00e-65	239.00
IUUC-Ete-032630	Echinops telfairi	40.78	1.00e-55	208.00
IUUC-Eca-033816	Equus caballus	36.94	3.00e-82	296.00
IUUC-Eeu-034840	Erinaceus europaeus	43.85	6.00e-52	196.00
IUUC-Fca-035751	Felis catus	36.73	7.00e-83	299.00
IUUC-Fal-036733	Ficedula albicollis	36.80	2.00e-88	317.00
IUUC-Fox-037743	Fusarium oxysporum	37.45	1.00e-90	325.00
IUUC-Fso-038395	Fusarium solani	37.10	5.00e-92	329.00
IUUC-Gmo-038803	Gadus morhua	37.70	5.00e-82	296.00
IUUC-Ggr-040092	Gaeumannomyces graminis	40.73	6.00e-67	246.00
IUUC-Gga-040714	Gallus gallus	37.58	5.00e-91	326.00
IUUC-Gac-042640	Gasterosteus aculeatus	35.66	4.00e-86	310.00
IUUC-Gma-044192	Glycine max	29.18	9.00e-55	206.00
IUUC-Ggo-045616	Gorilla gorilla	34.83	2.00e-79	288.00
IUUC-Hsa-046720	Homo sapiens	37.05	6.00e-79	286.00
IUUC-Itr-048796	Ictidomys tridecemlineatus	36.94	3.00e-83	300.00
IUUC-Kpa-049291	Komagataella pastoris	36.83	2.00e-90	324.00
IUUC-Lch-049729	Latimeria chalumnae	37.91	3.00e-79	286.00
IUUC-Lpe-051141	Leersia perrieri	27.13	9.00e-50	189.00
IUUC-Loc-051756	Lepisosteus oculatus	38.05	1.00e-90	325.00
IUUC-Lma-053083	Leptosphaeria maculans	36.01	1.00e-82	298.00
IUUC-Laf-054067	Loxodonta africana	38.14	5.00e-82	296.00
IUUC-Mcc-055096	Macaca mulatta	36.53	6.00e-82	296.00
IUUC-Meu-056604	Macropus eugenii	35.62	3.00e-73	267.00
IUUC-Mor-057186	Magnaporthe oryzae	34.66	9.00e-81	292.00
IUUC-Mtr-058346	Medicago truncatula	30.28	7.00e-60	222.00
IUUC-Mla-059116	Melampsora laricipopulina	40.08	2.00e-94	337.00
IUUC-Mga-060038	Meleagris gallopavo	35.47	2.00e-59	221.00
IUUC-Mvi-060272	Microbotryum violaceum	40.58	4.00e-95	339.00
IUUC-Mmr-060877	Microcebus murinus	36.94	5.00e-82	296.00
IUUC-Mdo-062168	Monodelphis domestica	38.94	2.00e-83	301.00
IUUC-Mmu-063441	Mus musculus	38.16	2.00e-85	307.00
IUUC-Mac-065330	Musa acuminata	27.18	1.00e-37	149.00
IUUC-Mpu-065704	Mustela putorius furo	36.94	1.00e-83	301.00
IUUC-Mlu-067640	Myotis lucifugus	36.94	4.00e-83	300.00
IUUC-Nfi-068589	Neosartorya fischeri	35.29	7.00e-68	249.00
IUUC-Ncr-068769	Neurospora crassa	35.39	6.00e-86	309.00
IUUC-Nle-069105	Nomascus leucogenys	36.71	3.00e-74	270.00
IUUC-Opr-070203	Ochotona princeps	37.35	5.00e-89	319.00
IUUC-Ont-072054	Oreochromis niloticus	36.94	5.00e-86	309.00
IUUC-Oan-073624	Ornithorhynchus anatinus	38.07	6.00e-78	282.00
IUUC-Ocu-074326	Oryctolagus cuniculus	36.73	2.00e-80	290.00
IUUC-Obr-076038	Oryza brachyantha	26.19	1.00e-44	172.00
IUUC-Ogl-077463	Oryza glaberrima	27.31	3.00e-44	171.00
IUUC-Ogu-078631	Oryza glumaepatula	27.59	6.00e-50	189.00
IUUC-Oin-079242	Oryza indica	27.50	2.00e-45	174.00
IUUC-Olo-080652	Oryza longistaminata	27.08	1.00e-42	165.00
IUUC-Ome-081109	Oryza meridionalis	26.99	9.00e-40	157.00
IUUC-Oni-082187	Oryza nivara	27.50	2.00e-45	174.00
IUUC-Opu-083995	Oryza punctata	25.85	7.00e-41	159.00
IUUC-Oru-084962	Oryza rufipogon	27.50	8.00e-41	159.00
IUUC-Osa-086201	Oryza sativa	27.50	8.00e-41	159.00
IUUC-Ola-087115	Oryzias latipes	37.09	2.00e-88	317.00
IUUC-Olu-087842	Ostreococcus lucimarinus	32.87	1.00e-73	268.00
IUUC-Oga-088204	Otolemur garnettii	36.33	2.00e-81	294.00
IUUC-Oar-089297	Ovis aries	36.86	2.00e-80	291.00
IUUC-Ptr-090953	Pan troglodytes	36.33	3.00e-81	293.00
IUUC-Pan-092451	Papio anubis	34.62	3.00e-79	287.00
IUUC-Psi-092999	Pelodiscus sinensis	39.34	3.00e-92	330.00
IUUC-Pma-094304	Petromyzon marinus	33.14	2.00e-69	254.00
IUUC-Pno-095060	Phaeosphaeria nodorum	35.00	9.00e-77	278.00
IUUC-Ppa-095433	Physcomitrella patens	37.30	2.00e-88	317.00
IUUC-Pfo-096433	Poecilia formosa	37.27	8.00e-80	289.00
IUUC-Pab-098677	Pongo abelii	36.33	2.00e-81	294.00
IUUC-Pop-099329	Populus trichocarpa	30.37	7.00e-53	199.00
IUUC-Pca-100444	Procavia capensis	41.84	4.00e-56	210.00
IUUC-Ppe-101318	Prunus persica	31.93	4.00e-70	256.00
IUUC-Pva-102162	Pteropus vampyrus	32.86	2.00e-70	258.00
IUUC-Pgr-103329	Puccinia graminis	35.57	1.00e-87	315.00
IUUC-Ptt-103837	Puccinia triticina	34.75	2.00e-86	310.00
IUUC-Pte-104133	Pyrenophora teres	36.68	2.00e-83	301.00
IUUC-Pyt-104675	Pyrenophora triticirepentis	36.49	3.00e-83	300.00
IUUC-Rno-105004	Rattus norvegicus	37.96	8.00e-84	302.00
IUUC-Sce-106443	Saccharomyces cerevisiae	35.12	3.00e-85	307.00
IUUC-Sha-107199	Sarcophilus harrisii	37.96	5.00e-88	316.00
IUUC-Sja-107670	Schizosaccharomyces japonicus	71.63	0.00e+00	770.00
IUUC-Ssl-108534	Sclerotinia sclerotiorum	35.33	4.00e-94	336.00
IUUC-Smo-109588	Selaginella moellendorffii	35.81	3.00e-86	310.00
IUUC-Sit-110043	Setaria italica	24.57	3.00e-32	131.00
IUUC-Stu-112396	Solanum tuberosum	32.94	2.00e-74	271.00
IUUC-Sar-113359	Sorex araneus	36.31	4.00e-44	169.00
IUUC-Sre-114995	Sporisorium reilianum	36.16	3.00e-92	330.00
IUUC-Ssc-115397	Sus scrofa	36.53	9.00e-82	295.00
IUUC-Tgu-116834	Taeniopygia guttata	36.29	2.00e-88	317.00
IUUC-Tru-118764	Takifugu rubripes	36.94	6.00e-91	325.00
IUUC-Tsy-119118	Tarsius syrichta	36.12	2.00e-81	294.00
IUUC-Tni-120053	Tetraodon nigroviridis	37.37	4.00e-92	329.00
IUUC-Tca-121842	Theobroma cacao	30.84	2.00e-59	221.00
IUUC-Tre-122172	Trichoderma reesei	39.02	1.00e-91	328.00
IUUC-Tvi-122288	Trichoderma virens	37.45	9.00e-76	275.00
IUUC-Tae-124909	Triticum aestivum	25.90	3.00e-39	154.00
IUUC-Tur-126846	Triticum urartu	33.83	1.00e-16	78.60
IUUC-Tme-127164	Tuber melanosporum	39.88	2.00e-100	357.00
IUUC-Tbe-127458	Tupaia belangeri	37.61	2.00e-78	284.00
IUUC-Ttr-128680	Tursiops truncatus	36.94	4.00e-75	273.00
IUUC-Uma-129508	Ustilago maydis	35.61	2.00e-90	324.00
IUUC-Vda-129696	Verticillium dahliae	44.80	3.00e-78	283.00
IUUC-Vpa-130820	Vicugna pacos	36.68	9.00e-82	295.00
IUUC-Vvi-131126	Vitis vinifera	29.18	2.00e-68	251.00
IUUC-Xtr-131826	Xenopus tropicalis	35.99	5.00e-87	313.00
IUUC-Xma-133373	Xiphophorus maculatus	36.23	2.00e-80	290.00
IUUC-Yli-134432	Yarrowia lipolytica	35.85	4.00e-92	329.00
IUUC-Zma-135241	Zea mays	25.65	9.00e-43	166.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence