iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein 3D Structure
PDB
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	1.70e-15	57.6	13	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           +kltvk+  gk ++l+vs+d tv++lK +++  ++v p  qkLI++Gk+L   +tL++ ++  g +++l+ ++
   Q: 13   IKLTVKF-GGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLMLMASQ 84
           689****.9999**********************************************************875 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MELEDPTMAD STIKLTVKFG GKSIPLSVSP DCTVKDLKSQ LQPITNVLPR GQKLIFKGKV 60
LVETSTLKQS DVGSGAKLML MASQGLHQGE GPILKEASIR PISRTVVSDK VDQRKPSVLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACCTTAA TGACTTGAGG ACATCTGTTT CCTCGTACGT ATTTCTGAAA TTAAGTGAAT 60
CTGAAGGTGA AAGCAAAGCC GGAGGAAGAA ATAAGAATCA CAGAGGTAAA ATTGTGATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS51450--LRR
PS50053--UBIQUITIN_2

Pfam

PF13855--LRR_8
PF00240--ubiquitin

SMART

SM00369--LRR_TYP
SM00213--UBQ

KEGG

ath:AT2G30105

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001663	Ailuropoda melanoleuca	33.12	4.00e-16	79.30
IUUC-Atr-002772	Amborella trichopoda	52.00	2.00e-60	224.00
IUUC-Apl-004029	Anas platyrhynchos	37.38	2.00e-14	73.60
IUUC-Aly-005571	Arabidopsis lyrata	95.99	0.00e+00	697.00
IUUC-Ame-011792	Astyanax mexicanus	33.76	3.00e-17	83.20
IUUC-Bta-012937	Bos taurus	33.12	1.00e-15	77.80
IUUC-Bdi-014104	Brachypodium distachyon	55.80	3.00e-107	380.00
IUUC-Bol-016339	Brassica oleracea	85.83	4.00e-177	613.00
IUUC-Bra-016795	Brassica rapa	86.10	6.00e-177	612.00
IUUC-Cel-018313	Caenorhabditis elegans	27.01	3.00e-10	59.30
IUUC-Cja-019359	Callithrix jacchus	32.48	7.00e-16	78.60
IUUC-Cfa-020908	Canis familiaris	31.85	3.00e-16	79.70
IUUC-Cpo-021744	Cavia porcellus	39.64	2.00e-17	83.60
IUUC-Cre-022825	Chlamydomonas reinhardtii	31.84	4.00e-23	101.00
IUUC-Csa-023784	Chlorocebus sabaeus	31.85	2.00e-15	76.60
IUUC-Cho-024851	Choloepus hoffmanni	32.37	1.00e-06	47.00
IUUC-Cin-025241	Ciona intestinalis	28.57	3.00e-14	73.20
IUUC-Csv-025951	Ciona savignyi	30.05	5.00e-14	71.60
IUUC-Dre-027424	Danio rerio	33.75	9.00e-16	78.20
IUUC-Dno-028857	Dasypus novemcinctus	32.68	9.00e-16	78.20
IUUC-Dor-030722	Dipodomys ordii	31.94	7.00e-11	60.80
IUUC-Dme-031624	Drosophila melanogaster	36.36	5.00e-05	41.60
IUUC-Ete-032958	Echinops telfairi	47.73	6.00e-07	48.90
IUUC-Eca-033505	Equus caballus	34.39	4.00e-17	82.40
IUUC-Eeu-035089	Erinaceus europaeus	33.33	5.00e-14	72.40
IUUC-Fca-036318	Felis catus	32.48	5.00e-17	82.40
IUUC-Fal-037299	Ficedula albicollis	36.94	3.00e-13	70.10
IUUC-Gmo-038494	Gadus morhua	35.62	3.00e-18	86.70
IUUC-Gga-041180	Gallus gallus	32.91	1.00e-15	77.80
IUUC-Gma-043846	Glycine max	61.04	4.00e-110	390.00
IUUC-Ggo-045293	Gorilla gorilla	31.85	2.00e-15	77.00
IUUC-Hsa-046865	Homo sapiens	31.85	2.00e-15	77.40
IUUC-Hvu-047769	Hordeum vulgare	54.57	3.00e-112	397.00
IUUC-Itr-048290	Ictidomys tridecemlineatus	31.85	2.00e-15	77.00
IUUC-Lch-049921	Latimeria chalumnae	32.69	7.00e-10	57.80
IUUC-Laf-054274	Loxodonta africana	33.76	6.00e-17	82.00
IUUC-Mcc-055328	Macaca mulatta	31.85	3.00e-15	76.60
IUUC-Meu-056407	Macropus eugenii	36.96	6.00e-14	72.00
IUUC-Mtr-057683	Medicago truncatula	57.95	2.00e-113	401.00
IUUC-Mga-059898	Meleagris gallopavo	32.91	7.00e-16	78.60
IUUC-Mmr-061558	Microcebus murinus	33.12	2.00e-17	84.00
IUUC-Mdo-062877	Monodelphis domestica	33.74	1.00e-18	87.80
IUUC-Mmu-063525	Mus musculus	34.39	9.00e-17	81.60
IUUC-Mac-064501	Musa acuminata	59.23	4.00e-115	407.00
IUUC-Mpu-066491	Mustela putorius furo	31.21	3.00e-15	76.30
IUUC-Mlu-068182	Myotis lucifugus	32.03	2.00e-16	80.50
IUUC-Nle-069349	Nomascus leucogenys	31.85	4.00e-15	76.30
IUUC-Opr-070326	Ochotona princeps	39.05	6.00e-16	79.00
IUUC-Ont-071685	Oreochromis niloticus	35.40	1.00e-16	81.30
IUUC-Oan-072957	Ornithorhynchus anatinus	32.48	1.00e-15	77.80
IUUC-Ocu-074328	Oryctolagus cuniculus	33.33	1.00e-11	63.20
IUUC-Obr-076454	Oryza brachyantha	54.72	1.00e-113	402.00
IUUC-Ogl-077480	Oryza glaberrima	55.07	2.00e-116	411.00
IUUC-Oin-079319	Oryza indica	57.14	5.00e-76	277.00
IUUC-Olo-081076	Oryza longistaminata	31.31	6.00e-07	49.30
IUUC-Ome-081910	Oryza meridionalis	53.61	2.00e-109	389.00
IUUC-Osa-085755	Oryza sativa	53.38	5.00e-33	132.00
IUUC-Ola-087391	Oryzias latipes	33.85	7.00e-12	64.30
IUUC-Oga-088129	Otolemur garnettii	33.76	1.00e-16	81.30
IUUC-Oar-089353	Ovis aries	33.76	5.00e-16	79.00
IUUC-Ptr-091511	Pan troglodytes	31.85	2.00e-15	77.00
IUUC-Pan-092251	Papio anubis	31.85	2.00e-15	77.40
IUUC-Psi-093778	Pelodiscus sinensis	30.62	3.00e-15	76.60
IUUC-Pma-094158	Petromyzon marinus	34.67	4.00e-14	72.40
IUUC-Ppa-095427	Physcomitrella patens	41.71	4.00e-76	277.00
IUUC-Pfo-096094	Poecilia formosa	31.88	7.00e-16	78.60
IUUC-Pab-098187	Pongo abelii	32.03	2.00e-15	76.60
IUUC-Pop-099197	Populus trichocarpa	66.22	3.00e-144	503.00
IUUC-Pca-100526	Procavia capensis	35.24	2.00e-13	70.50
IUUC-Ppe-101851	Prunus persica	63.81	1.00e-130	458.00
IUUC-Pva-102557	Pteropus vampyrus	39.05	7.00e-16	78.60
IUUC-Pgr-103622	Puccinia graminis	29.75	8.00e-08	52.80
IUUC-Pyt-104751	Pyrenophora triticirepentis	34.57	2.00e-08	54.30
IUUC-Rno-105540	Rattus norvegicus	30.19	9.00e-16	78.20
IUUC-Sha-107485	Sarcophilus harrisii	32.52	1.00e-17	84.30
IUUC-Spo-108106	Schizosaccharomyces pombe	28.18	2.00e-09	57.80
IUUC-Smo-109452	Selaginella moellendorffii	38.89	2.00e-46	179.00
IUUC-Sit-110214	Setaria italica	56.91	1.00e-105	375.00
IUUC-Sly-111052	Solanum lycopersicum	58.93	4.00e-127	447.00
IUUC-Stu-112067	Solanum tuberosum	59.84	8.00e-128	449.00
IUUC-Sar-113098	Sorex araneus	31.37	3.00e-12	66.20
IUUC-Sbi-114187	Sorghum bicolor	55.89	6.00e-104	370.00
IUUC-Ssc-116105	Sus scrofa	33.12	2.00e-16	80.50
IUUC-Tgu-116857	Taeniopygia guttata	33.33	1.00e-15	77.00
IUUC-Tru-117930	Takifugu rubripes	36.88	2.00e-16	80.10
IUUC-Tsy-119397	Tarsius syrichta	32.50	1.00e-08	53.50
IUUC-Tni-120714	Tetraodon nigroviridis	36.25	1.00e-16	81.30
IUUC-Tca-121678	Theobroma cacao	67.23	1.00e-141	495.00
IUUC-Tae-125328	Triticum aestivum	55.68	4.00e-114	404.00
IUUC-Tbe-128087	Tupaia belangeri	33.33	4.00e-12	65.10
IUUC-Ttr-128282	Tursiops truncatus	33.12	4.00e-16	79.30
IUUC-Vda-129866	Verticillium dahliae	35.71	3.00e-05	43.90
IUUC-Vpa-130740	Vicugna pacos	31.85	1.00e-14	74.30
IUUC-Vvi-131120	Vitis vinifera	63.74	9.00e-132	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence