iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000052344.5	ENSDART00000171952.1	ENSDARP00000136797.1
ENSDARG00000052344.5	ENSDART00000074174.5	ENSDARP00000068663.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-57	188.4	105	136
UBD/Beta-Prp	3.70e-94	316.2	339	638

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           H+ +v +++f  ++tll++G+ Dgtik+WD+ 
   Q: 105  HSVPVASMSFdcTSTLLATGGCDGTIKLWDVI 136
           89999*****9644****************85 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls..tgkcv 87
           ++ g++++v+  vkf  +d++++a++  ++ +kv++++t ++ + l gh++++ +++  ++g++++t+++D+ ++vw  d+s     cv
   Q: 339  QFVGYNDDVLD-VKFvGKDDTHIAVATNSSQLKVFELSTNSC-QILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWrmDVSsgRVHCV 425
           67789999999.9999999********************888.**********************************887774455788 PP
   S: 88   htlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
              +gh++ v s++ s+ +++++vsGs+d t++vwdl++ +  e         t++ h++ vn+v+v+p+++ll+sGs Drt +lW l+
   Q: 426  AQGTGHSNAVGSIACSRmKQQFVVSGSQDCTVKVWDLPETTGAEGvmmmkarsTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALS 514
           8888*************666*******************99998899****************************************** PP
   S: 168  tgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
             +ll   +g h + v s++f++  + l s+s dg+v++w++q  +c++t++gh++ v+ + f ++++ lvs +sDg +++W ++++++
   Q: 515  DLRLLGVCRG-HRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNEC 602
           *********9.****************************************************************************** PP
   S: 257  lktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           ++tl  h+++v++  + +  d  +v+gs+ds++ i k
   Q: 603  VRTLDAHQDKVWALHG-GCRDELMVTGSADSTITIRK 638
           ****************.999**************987 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAGKTLLFKS NYAVSSRIEP FYKGGKVQVS GDEQHIFCTY GPKINILQIS TGKIIHSIEQ 60
EDQEDITAFA LSPDDEMLVS ASRALLLRQW DWKQQQCRRS WRAVHSVPVA SMSFDCTSTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATCTGTGC GACAACATCC ATGAACACAT GCACCATGCG TGTATCACCA AGGGCTGCAA 60
AAATAATAAA CACATAAACT TTTAACAATA ACAGCAACAT TTACAATATC GACGAGGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030098--P:lymphocyte differentiation
GO:0010564--P:regulation of cell cycle process
GO:0006364--P:rRNA processing
GO:0048538--P:thymus development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	40.57	2.00e-131	462.00
IUUC-Aml-002376	Ailuropoda melanoleuca	52.82	0.00e+00	868.00
IUUC-Atr-002486	Amborella trichopoda	40.46	8.00e-143	501.00
IUUC-Apl-003519	Anas platyrhynchos	48.17	0.00e+00	696.00
IUUC-Aca-004363	Anolis carolinensis	57.79	3.00e-156	545.00
IUUC-Aly-006152	Arabidopsis lyrata	35.82	4.00e-138	486.00
IUUC-Ath-006966	Arabidopsis thaliana	35.32	1.00e-136	480.00
IUUC-Ago-007746	Ashbya gossypii	29.02	4.00e-92	332.00
IUUC-Acl-008009	Aspergillus clavatus	29.78	3.00e-93	336.00
IUUC-Afl-008681	Aspergillus flavus	29.84	6.00e-89	322.00
IUUC-Afu-008798	Aspergillus fumigatus	29.24	1.00e-80	295.00
IUUC-Ani-009278	Aspergillus nidulans	30.55	3.00e-86	313.00
IUUC-Ang-009640	Aspergillus niger	29.12	8.00e-98	352.00
IUUC-Aor-010160	Aspergillus oryzae	29.84	7.00e-89	322.00
IUUC-Ate-010320	Aspergillus terreus	27.84	2.00e-93	337.00
IUUC-Ame-010930	Astyanax mexicanus	80.69	1.00e-101	362.00
IUUC-Bgr-012054	Blumeria graminis	27.67	2.00e-94	340.00
IUUC-Bta-012611	Bos taurus	52.80	0.00e+00	845.00
IUUC-Bci-013797	Botrytis cinerea	29.37	4.00e-101	363.00
IUUC-Bdi-014384	Brachypodium distachyon	41.98	8.00e-142	498.00
IUUC-Bol-016483	Brassica oleracea	35.76	3.00e-141	496.00
IUUC-Bra-017328	Brassica rapa	35.16	5.00e-138	485.00
IUUC-Cel-018664	Caenorhabditis elegans	29.18	8.00e-104	371.00
IUUC-Cja-019092	Callithrix jacchus	52.98	0.00e+00	892.00
IUUC-Cfa-021040	Canis familiaris	52.29	0.00e+00	861.00
IUUC-Cpo-022529	Cavia porcellus	52.35	0.00e+00	850.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	54.81	2.00e-44	171.00
IUUC-Csa-024205	Chlorocebus sabaeus	52.12	0.00e+00	879.00
IUUC-Cin-025560	Ciona intestinalis	42.38	0.00e+00	684.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	29.64	4.00e-107	382.00
IUUC-Cne-027082	Cryptococcus neoformans	34.21	1.00e-101	364.00
IUUC-Cme-027159	Cyanidioschyzon merolae	22.08	5.00e-21	97.40
IUUC-Dno-029914	Dasypus novemcinctus	50.55	1.00e-174	606.00
IUUC-Dor-030685	Dipodomys ordii	55.76	3.00e-155	542.00
IUUC-Dse-031429	Dothistroma septosporum	27.34	1.00e-89	324.00
IUUC-Dme-031995	Drosophila melanogaster	31.83	8.00e-104	371.00
IUUC-Ete-033086	Echinops telfairi	50.72	3.00e-125	442.00
IUUC-Eca-034354	Equus caballus	53.57	0.00e+00	853.00
IUUC-Eeu-034832	Erinaceus europaeus	54.45	4.00e-144	505.00
IUUC-Fca-036136	Felis catus	47.64	0.00e+00	728.00
IUUC-Fal-036859	Ficedula albicollis	54.76	0.00e+00	889.00
IUUC-Fox-037863	Fusarium oxysporum	29.65	1.00e-94	341.00
IUUC-Fso-038389	Fusarium solani	28.45	3.00e-102	366.00
IUUC-Gmo-038711	Gadus morhua	60.89	0.00e+00	973.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.59	1.00e-94	341.00
IUUC-Gga-040263	Gallus gallus	62.85	0.00e+00	840.00
IUUC-Gac-041291	Gasterosteus aculeatus	64.26	0.00e+00	1087.00
IUUC-Gma-044026	Glycine max	37.85	2.00e-150	526.00
IUUC-Ggo-044693	Gorilla gorilla	52.37	0.00e+00	865.00
IUUC-Hsa-046048	Homo sapiens	52.49	0.00e+00	867.00
IUUC-Hvu-047608	Hordeum vulgare	37.15	3.00e-156	546.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	53.06	0.00e+00	886.00
IUUC-Kpa-049209	Komagataella pastoris	27.95	3.00e-95	343.00
IUUC-Lch-050085	Latimeria chalumnae	56.74	0.00e+00	889.00
IUUC-Lpe-050945	Leersia perrieri	36.80	2.00e-153	536.00
IUUC-Loc-052679	Lepisosteus oculatus	63.22	0.00e+00	1066.00
IUUC-Laf-053685	Loxodonta africana	53.19	0.00e+00	829.00
IUUC-Mcc-055861	Macaca mulatta	52.24	0.00e+00	864.00
IUUC-Meu-056820	Macropus eugenii	48.46	0.00e+00	665.00
IUUC-Mor-057234	Magnaporthe oryzae	26.41	8.00e-92	332.00
IUUC-Mpo-057456	Magnaporthe poae	28.43	2.00e-83	303.00
IUUC-Mtr-058122	Medicago truncatula	37.56	1.00e-150	527.00
IUUC-Mla-058980	Melampsora laricipopulina	30.23	5.00e-87	315.00
IUUC-Mga-060080	Meleagris gallopavo	55.35	0.00e+00	915.00
IUUC-Mvi-060338	Microbotryum violaceum	33.98	1.00e-133	470.00
IUUC-Mmr-060762	Microcebus murinus	51.65	0.00e+00	860.00
IUUC-Mdo-061975	Monodelphis domestica	53.48	0.00e+00	849.00
IUUC-Mmu-064038	Mus musculus	53.24	0.00e+00	844.00
IUUC-Mac-065189	Musa acuminata	36.37	4.00e-145	509.00
IUUC-Mpu-066526	Mustela putorius furo	52.92	0.00e+00	844.00
IUUC-Mlu-067716	Myotis lucifugus	53.50	0.00e+00	889.00
IUUC-Nfi-068474	Neosartorya fischeri	29.97	4.00e-84	306.00
IUUC-Ncr-068826	Neurospora crassa	27.62	3.00e-94	340.00
IUUC-Nle-069832	Nomascus leucogenys	52.37	0.00e+00	888.00
IUUC-Opr-071183	Ochotona princeps	50.83	0.00e+00	797.00
IUUC-Ont-072371	Oreochromis niloticus	65.82	0.00e+00	1103.00
IUUC-Oan-073491	Ornithorhynchus anatinus	61.67	0.00e+00	752.00
IUUC-Oba-075963	Oryza barthii	38.39	7.00e-149	521.00
IUUC-Obr-076173	Oryza brachyantha	37.28	9.00e-150	524.00
IUUC-Ogl-077692	Oryza glaberrima	38.39	1.00e-148	521.00
IUUC-Ogu-078965	Oryza glumaepatula	38.39	8.00e-149	521.00
IUUC-Oin-079708	Oryza indica	38.39	2.00e-148	520.00
IUUC-Olo-080679	Oryza longistaminata	38.62	1.00e-149	524.00
IUUC-Oni-082960	Oryza nivara	38.39	2.00e-148	520.00
IUUC-Opu-083282	Oryza punctata	36.73	6.00e-149	521.00
IUUC-Oru-085224	Oryza rufipogon	38.39	4.00e-149	522.00
IUUC-Osa-085320	Oryza sativa	38.39	4.00e-149	522.00
IUUC-Ola-086370	Oryzias latipes	55.83	5.00e-168	584.00
IUUC-Olu-087814	Ostreococcus lucimarinus	29.13	2.00e-85	310.00
IUUC-Oga-088458	Otolemur garnettii	53.18	0.00e+00	884.00
IUUC-Oar-090032	Ovis aries	46.94	2.00e-174	605.00
IUUC-Ptr-090749	Pan troglodytes	52.37	0.00e+00	863.00
IUUC-Pan-091691	Papio anubis	51.13	0.00e+00	838.00
IUUC-Psi-093200	Pelodiscus sinensis	55.05	0.00e+00	922.00
IUUC-Pma-094165	Petromyzon marinus	46.37	2.00e-170	592.00
IUUC-Pno-095048	Phaeosphaeria nodorum	30.81	9.00e-81	295.00
IUUC-Ppa-095336	Physcomitrella patens	38.77	4.00e-159	555.00
IUUC-Pfo-096132	Poecilia formosa	64.36	0.00e+00	1050.00
IUUC-Pab-097855	Pongo abelii	52.49	0.00e+00	886.00
IUUC-Pop-099434	Populus trichocarpa	35.44	2.00e-141	496.00
IUUC-Pca-100232	Procavia capensis	53.31	2.00e-106	380.00
IUUC-Ppe-101665	Prunus persica	41.62	8.00e-140	491.00
IUUC-Pva-102178	Pteropus vampyrus	53.54	0.00e+00	876.00
IUUC-Pgr-103288	Puccinia graminis	28.59	4.00e-79	290.00
IUUC-Ptt-103808	Puccinia triticina	30.12	4.00e-75	276.00
IUUC-Pte-104205	Pyrenophora teres	28.68	3.00e-96	347.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	27.63	4.00e-87	316.00
IUUC-Rno-105617	Rattus norvegicus	54.19	0.00e+00	857.00
IUUC-Sce-106281	Saccharomyces cerevisiae	28.71	2.00e-96	347.00
IUUC-Sha-107378	Sarcophilus harrisii	53.44	0.00e+00	856.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	33.83	4.00e-123	436.00
IUUC-Spo-108361	Schizosaccharomyces pombe	31.62	9.00e-109	388.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	28.98	4.00e-102	365.00
IUUC-Smo-109257	Selaginella moellendorffii	36.33	4.00e-146	512.00
IUUC-Sit-110258	Setaria italica	36.29	2.00e-150	526.00
IUUC-Sly-111521	Solanum lycopersicum	39.48	4.00e-139	489.00
IUUC-Stu-112718	Solanum tuberosum	49.63	2.00e-35	140.00
IUUC-Sar-113586	Sorex araneus	55.56	7.00e-33	135.00
IUUC-Sbi-114768	Sorghum bicolor	36.58	3.00e-153	536.00
IUUC-Sre-115159	Sporisorium reilianum	32.55	2.00e-87	317.00
IUUC-Ssc-116342	Sus scrofa	44.58	5.00e-148	518.00
IUUC-Tgu-117320	Taeniopygia guttata	60.00	0.00e+00	788.00
IUUC-Tru-118024	Takifugu rubripes	71.08	0.00e+00	947.00
IUUC-Tni-119971	Tetraodon nigroviridis	64.45	0.00e+00	1032.00
IUUC-Tca-121248	Theobroma cacao	38.31	5.00e-149	521.00
IUUC-Tre-122079	Trichoderma reesei	28.85	1.00e-93	337.00
IUUC-Tvi-122554	Trichoderma virens	28.48	2.00e-92	334.00
IUUC-Tae-124473	Triticum aestivum	37.15	5.00e-157	548.00
IUUC-Tur-126436	Triticum urartu	42.07	1.00e-115	410.00
IUUC-Tme-126942	Tuber melanosporum	30.60	1.00e-102	367.00
IUUC-Tbe-128000	Tupaia belangeri	60.51	2.00e-59	224.00
IUUC-Ttr-128964	Tursiops truncatus	52.25	0.00e+00	848.00
IUUC-Uma-129473	Ustilago maydis	31.65	4.00e-96	346.00
IUUC-Vda-129749	Verticillium dahliae	29.54	8.00e-94	338.00
IUUC-Vvi-131511	Vitis vinifera	38.19	1.00e-147	517.00
IUUC-Xtr-132816	Xenopus tropicalis	50.93	0.00e+00	788.00
IUUC-Xma-133672	Xiphophorus maculatus	64.52	0.00e+00	1079.00
IUUC-Yli-134602	Yarrowia lipolytica	35.42	8.00e-139	488.00
IUUC-Zma-135559	Zea mays	40.94	1.00e-138	487.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence