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Tag Content
iUUCD ID IUUC-Ggr-039820
Ensembl Protein ID GGTG_00479T0
UniProt Accession J3NGU0; J3NGU0_GAGT3
Genbank Protein ID EJT80480.1
Protein Name U3 small nucleolar RNA-associated protein 13
Genbank Nucleotide ID ADBI01000050
Gene Name GGTG_00479
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GGTG_00479 GGTG_00479T0 GGTG_00479T0
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.00e-42 139.0 574 627
UBD/Beta-Prp 2.00e-81 272.9 366 639
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.............sdtl......lvsGsdDgtikvWDlrtgvllk 37
    gH +v++++f + + +++Gs+D+tik+W+l++ ++l+
   Q: 574 GHRRGVWSVRFapadmpilqgedgT--TaagkgiVLTGSGDKTIKIWSLSSYTCLR 627
    8999********9988888886551..24555549*************98877776 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvwdls....tgkcvht 89
    ++g+h++ i pd+sl+a + ++ +++ +v + + + l+gh++ v a++ + +g +++tg++D+t+++w ++ +++c t
   Q: 366 ISGTHDDIIDLGYLLPDRSLMALATNSEDVRIVSVADATEgsgyfgqdVTVLKGHQDIVIALDTDWSGHWIATGAKDNTARLWRIDpannSYDCYAT 462
    678999999955559*****99999999999999999777899****************************************66666779****** PP
   S: 90 lkghedsvls..................lsfspsgdklvsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrt 160
    + gh +s+ + l+ p +l++Gs+d t++ w++ + t + hd+ +n v ++ g+l++s+s D++
   Q: 463 FAGHAESLGAvglpktippassaayadpLNHPP--PFLITGSQDLTVKKWEIARTAQQGTkkasravfTRKAHDKDINAVDINNAGQLFASASQDKV 557
    *******************99976644444444..9***************9877777667999********************************* PP
   S: 161 vrlWdlktgkllrtltgghtdsvyslsfdsng...............kelvsgsldgtvklwdlqtgecvrtlnghtdnvksv 228
    v++W+++ g++ l+g h + v s+ f + +++gs d+t+k+w+l++ +c+rt++gh++ v+ v
   Q: 558 VKIWSVQEGEVQGILKG-HRRGVWSVRFAPADmpilqgedgttaagkGIVLTGSGDKTIKIWSLSSYTCLRTFEGHSNSVLKV 639
    ****************9.*********99988999999999999999999*****************************9987 PP
   

Organism Gaeumannomyces graminis
Protein Sequence
(Fasta)
MASKMAFKTT FEPEKVIQPI FTGGAVALDN KARILASTLG EEAVLTDITT GRHFATIEGD 60
GEPISTLILT PSVSHLIICS RSLTMKIYAL RLSPDHESIE TTLVRTLKPH GTPVVVLAVD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ggr-039820|E3,WD_repeat;UBD,Beta-Prp|Gaeumannomyces graminis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGGAACAAG CTCGTGGGAG TGGGATGCGC ATCATTTTCC TCTGATTTGG CCTCGTCGTT 60
GTTGACGGCG CATTACCACC GAAATCATGG CGTCAAAGAT GGCATTTAAG ACGACCTTTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ggr-039820|E3,WD_repeat;UBD,Beta-Prp|Gaeumannomyces graminis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000765 Aegilops tauschii 28.37 6.00e-79 287.00
IUUC-Aml-002376 Ailuropoda melanoleuca 28.18 8.00e-101 360.00
IUUC-Atr-002486 Amborella trichopoda 28.27 3.00e-106 378.00
IUUC-Apl-003519 Anas platyrhynchos 28.74 2.00e-90 325.00
IUUC-Aca-004363 Anolis carolinensis 27.57 3.00e-49 187.00
IUUC-Aly-006152 Arabidopsis lyrata 26.69 6.00e-91 327.00
IUUC-Ath-006966 Arabidopsis thaliana 27.29 1.00e-94 339.00
IUUC-Ago-007746 Ashbya gossypii 31.50 3.00e-120 424.00
IUUC-Acl-008009 Aspergillus clavatus 51.68 0.00e+00 897.00
IUUC-Afl-008681 Aspergillus flavus 50.37 0.00e+00 828.00
IUUC-Afu-008798 Aspergillus fumigatus 50.96 0.00e+00 865.00
IUUC-Ani-009278 Aspergillus nidulans 48.52 0.00e+00 884.00
IUUC-Ang-009640 Aspergillus niger 49.54 0.00e+00 858.00
IUUC-Aor-010160 Aspergillus oryzae 50.48 0.00e+00 826.00
IUUC-Ate-010320 Aspergillus terreus 51.55 0.00e+00 886.00
IUUC-Ame-010930 Astyanax mexicanus 28.81 6.00e-24 102.00
IUUC-Bgr-012054 Blumeria graminis 52.32 0.00e+00 932.00
IUUC-Bta-012611 Bos taurus 28.99 2.00e-100 358.00
IUUC-Bci-013797 Botrytis cinerea 59.45 0.00e+00 1085.00
IUUC-Bdi-014384 Brachypodium distachyon 29.19 6.00e-109 387.00
IUUC-Bol-015097 Brassica oleracea 27.11 6.00e-92 330.00
IUUC-Bra-017798 Brassica rapa 27.55 2.00e-92 332.00
IUUC-Cel-018664 Caenorhabditis elegans 25.59 1.00e-76 279.00
IUUC-Cja-019092 Callithrix jacchus 28.99 3.00e-103 368.00
IUUC-Cfa-021040 Canis familiaris 29.21 5.00e-102 363.00
IUUC-Cpo-022529 Cavia porcellus 29.51 7.00e-100 357.00
IUUC-Cre-022986 Chlamydomonas reinhardtii 44.10 1.00e-32 130.00
IUUC-Csa-024205 Chlorocebus sabaeus 29.53 2.00e-106 379.00
IUUC-Cin-025560 Ciona intestinalis 28.26 3.00e-103 368.00
IUUC-Cgl-026481 Colletotrichum gloeosporioides 64.96 0.00e+00 1202.00
IUUC-Cne-027082 Cryptococcus neoformans 32.75 4.00e-126 444.00
IUUC-Cme-027159 Cyanidioschyzon merolae 28.67 9.00e-24 104.00
IUUC-Dre-028138 Danio rerio 27.67 4.00e-96 344.00
IUUC-Dno-029914 Dasypus novemcinctus 26.78 2.00e-41 162.00
IUUC-Dor-030685 Dipodomys ordii 30.24 3.00e-67 248.00
IUUC-Dse-031429 Dothistroma septosporum 50.82 0.00e+00 923.00
IUUC-Dme-031995 Drosophila melanogaster 25.03 5.00e-59 221.00
IUUC-Ete-033086 Echinops telfairi 31.16 5.00e-64 237.00
IUUC-Eca-034354 Equus caballus 28.99 3.00e-99 354.00
IUUC-Eeu-034832 Erinaceus europaeus 30.34 1.00e-61 229.00
IUUC-Fca-036136 Felis catus 28.04 1.00e-94 339.00
IUUC-Fal-036859 Ficedula albicollis 28.37 9.00e-101 359.00
IUUC-Fox-037863 Fusarium oxysporum 61.92 0.00e+00 1087.00
IUUC-Fso-038389 Fusarium solani 66.31 0.00e+00 1213.00
IUUC-Gmo-038711 Gadus morhua 26.20 1.00e-83 302.00
IUUC-Gga-040263 Gallus gallus 28.48 1.00e-104 372.00
IUUC-Gac-041291 Gasterosteus aculeatus 28.74 5.00e-105 374.00
IUUC-Gma-044026 Glycine max 28.99 1.00e-106 379.00
IUUC-Ggo-044693 Gorilla gorilla 29.08 1.00e-104 372.00
IUUC-Hsa-046048 Homo sapiens 28.97 2.00e-104 372.00
IUUC-Hvu-047608 Hordeum vulgare 28.86 2.00e-105 375.00
IUUC-Itr-048391 Ictidomys tridecemlineatus 29.07 3.00e-111 394.00
IUUC-Kpa-049209 Komagataella pastoris 31.90 1.00e-131 462.00
IUUC-Lch-050085 Latimeria chalumnae 27.66 1.00e-93 336.00
IUUC-Lpe-050945 Leersia perrieri 28.57 4.00e-101 360.00
IUUC-Loc-052679 Lepisosteus oculatus 30.57 8.00e-118 416.00
IUUC-Laf-053685 Loxodonta africana 28.80 2.00e-94 338.00
IUUC-Mcc-055861 Macaca mulatta 29.64 2.00e-104 371.00
IUUC-Meu-056820 Macropus eugenii 28.46 6.00e-45 174.00
IUUC-Mor-057234 Magnaporthe oryzae 76.65 0.00e+00 1352.00
IUUC-Mpo-057456 Magnaporthe poae 92.19 0.00e+00 1260.00
IUUC-Mtr-058122 Medicago truncatula 28.78 1.00e-105 376.00
IUUC-Mla-058980 Melampsora laricipopulina 28.36 1.00e-101 362.00
IUUC-Mga-060080 Meleagris gallopavo 28.05 2.00e-104 371.00
IUUC-Mvi-060338 Microbotryum violaceum 33.06 7.00e-141 493.00
IUUC-Mmr-060762 Microcebus murinus 28.82 8.00e-102 363.00
IUUC-Mdo-061975 Monodelphis domestica 28.77 8.00e-96 343.00
IUUC-Mmu-064038 Mus musculus 28.12 5.00e-100 357.00
IUUC-Mac-065189 Musa acuminata 26.61 8.00e-102 363.00
IUUC-Mpu-066526 Mustela putorius furo 29.57 5.00e-100 357.00
IUUC-Mlu-067716 Myotis lucifugus 29.20 4.00e-111 394.00
IUUC-Nfi-068474 Neosartorya fischeri 50.64 0.00e+00 872.00
IUUC-Ncr-068826 Neurospora crassa 60.43 0.00e+00 1093.00
IUUC-Nle-069832 Nomascus leucogenys 29.72 5.00e-107 380.00
IUUC-Opr-071183 Ochotona princeps 28.68 6.00e-96 343.00
IUUC-Ont-072371 Oreochromis niloticus 29.05 3.00e-106 378.00
IUUC-Oan-073491 Ornithorhynchus anatinus 28.59 4.00e-82 297.00
IUUC-Oba-075963 Oryza barthii 29.46 9.00e-105 373.00
IUUC-Obr-076173 Oryza brachyantha 29.67 4.00e-102 364.00
IUUC-Ogl-077692 Oryza glaberrima 29.42 2.00e-104 372.00
IUUC-Ogu-078965 Oryza glumaepatula 29.46 1.00e-104 372.00
IUUC-Oin-079708 Oryza indica 29.46 6.00e-105 373.00
IUUC-Olo-080679 Oryza longistaminata 29.68 1.00e-104 372.00
IUUC-Oni-082960 Oryza nivara 29.46 6.00e-105 373.00
IUUC-Opu-083282 Oryza punctata 28.94 3.00e-100 358.00
IUUC-Oru-085224 Oryza rufipogon 29.46 7.00e-105 373.00
IUUC-Osa-085320 Oryza sativa 29.46 7.00e-105 373.00
IUUC-Ola-086370 Oryzias latipes 26.35 2.00e-38 152.00
IUUC-Olu-087814 Ostreococcus lucimarinus 28.65 5.00e-76 277.00
IUUC-Oga-088458 Otolemur garnettii 29.43 1.00e-109 389.00
IUUC-Oar-090032 Ovis aries 27.70 1.00e-66 246.00
IUUC-Ptr-090749 Pan troglodytes 29.18 2.00e-103 368.00
IUUC-Pan-091691 Papio anubis 28.34 3.00e-95 341.00
IUUC-Psi-093200 Pelodiscus sinensis 27.83 7.00e-99 353.00
IUUC-Pma-094165 Petromyzon marinus 27.17 2.00e-64 238.00
IUUC-Pno-095048 Phaeosphaeria nodorum 54.70 0.00e+00 807.00
IUUC-Ppa-095336 Physcomitrella patens 30.27 8.00e-104 370.00
IUUC-Pfo-096132 Poecilia formosa 27.97 4.00e-100 357.00
IUUC-Pab-097855 Pongo abelii 28.80 1.00e-103 369.00
IUUC-Pop-099858 Populus trichocarpa 28.34 5.00e-95 340.00
IUUC-Pca-100232 Procavia capensis 28.05 6.00e-34 137.00
IUUC-Ppe-101665 Prunus persica 28.60 5.00e-101 360.00
IUUC-Pva-102178 Pteropus vampyrus 29.48 3.00e-106 377.00
IUUC-Pgr-103288 Puccinia graminis 28.71 2.00e-99 355.00
IUUC-Ptt-103808 Puccinia triticina 29.99 4.00e-86 311.00
IUUC-Pte-104205 Pyrenophora teres 54.18 0.00e+00 957.00
IUUC-Pyt-104658 Pyrenophora triticirepentis 52.95 0.00e+00 917.00
IUUC-Rno-105617 Rattus norvegicus 29.13 5.00e-102 363.00
IUUC-Sce-106281 Saccharomyces cerevisiae 32.73 5.00e-134 470.00
IUUC-Sha-107378 Sarcophilus harrisii 28.80 9.00e-98 349.00
IUUC-Sja-107718 Schizosaccharomyces japonicus 36.51 3.00e-147 513.00
IUUC-Spo-108361 Schizosaccharomyces pombe 35.31 4.00e-132 464.00
IUUC-Ssl-108592 Sclerotinia sclerotiorum 61.18 0.00e+00 1122.00
IUUC-Smo-109257 Selaginella moellendorffii 31.21 3.00e-112 397.00
IUUC-Sit-110258 Setaria italica 30.39 4.00e-113 400.00
IUUC-Sly-111521 Solanum lycopersicum 28.23 1.00e-98 353.00
IUUC-Stu-112718 Solanum tuberosum 38.69 2.00e-22 95.90
IUUC-Sbi-114768 Sorghum bicolor 29.57 1.00e-109 389.00
IUUC-Sre-115159 Sporisorium reilianum 29.06 4.00e-100 357.00
IUUC-Ssc-116342 Sus scrofa 26.68 2.00e-52 198.00
IUUC-Tgu-117320 Taeniopygia guttata 27.96 8.00e-95 339.00
IUUC-Tru-118024 Takifugu rubripes 27.99 6.00e-100 357.00
IUUC-Tni-119971 Tetraodon nigroviridis 28.63 2.00e-97 348.00
IUUC-Tca-121248 Theobroma cacao 27.52 5.00e-102 364.00
IUUC-Tre-122079 Trichoderma reesei 64.26 0.00e+00 1175.00
IUUC-Tvi-122554 Trichoderma virens 63.05 0.00e+00 1155.00
IUUC-Tae-124473 Triticum aestivum 29.02 2.00e-105 375.00
IUUC-Tur-126436 Triticum urartu 30.46 1.00e-73 269.00
IUUC-Tme-126942 Tuber melanosporum 46.78 0.00e+00 736.00
IUUC-Tbe-128000 Tupaia belangeri 34.39 1.00e-18 87.40
IUUC-Ttr-128964 Tursiops truncatus 28.08 1.00e-99 355.00
IUUC-Uma-129473 Ustilago maydis 29.04 3.00e-93 335.00
IUUC-Vda-129749 Verticillium dahliae 64.68 0.00e+00 1073.00
IUUC-Vvi-131511 Vitis vinifera 28.11 2.00e-99 355.00
IUUC-Xtr-132816 Xenopus tropicalis 26.54 2.00e-78 285.00
IUUC-Xma-133672 Xiphophorus maculatus 27.52 3.00e-100 358.00
IUUC-Yli-134602 Yarrowia lipolytica 39.32 4.00e-171 593.00
IUUC-Zma-135976 Zea mays 28.88 7.00e-101 360.00
Created Date 25-Jun-2017

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