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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108361
UUCD1 version UUC-ScP-00228
Ensembl Protein ID SPCC16A11.02.1:pep
UniProt Accession Q9USN3; Q9Y7U2; UTP13_SCHPO
Genbank Protein ID CAB40020.1
Protein Name Probable U3 small nucleolar RNA-associated protein 13
Genbank Nucleotide ID CU329672
Gene Name utp13; SPCC16A11.02; SPCC63.16
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPCC16A11.02 SPCC16A11.02.1 SPCC16A11.02.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.60e-57 187.0 505 544
UBD/Beta-Prp 4.30e-114 378.8 457 629
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllks 38
           gH  +v++++f   s + l+sGs+D ti++W+++t+ ++++
   Q: 505  GHRRGVWACSFnpfS-RQLASGSGDRTIRIWNVDTQQCVQT 544
           89*********8744.89********************986 PP
   

   UBD/Beta-Prp
   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetls 134
           ++++++ h+  v+a++ s+dg i++++s+D+tik+wd stg+ v +l+gh + v+++sf+p +  l+sGs drtir+w+++t+qc++ tl+
   Q: 457  AVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQ-TLE 546
           467888888888888888888888888888888888888888888888888888888888888888888888888888888888888.888 PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           gh+g++  + + ++g  +vs+++D+ v++W+l++g+++ tl   h+d+v  l+ + +g  lvsg+ d  v +w   t+e + ++
   Q: 547  GHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDN-HEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQ 629
           8888888888888888888888888888888888888888875.8888888888888888888888888888888877766655 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Involved in nucleolar processing of pre-18S ribosomal RNA.
 Involved in nucleolar processing of pre-18S ribosomal RNA.
Protein Sequence
(Fasta)
MAPIGEKKRF ELEKSIEPIY TGGPVAFDSN EKILVTALTD RIIGTRSETG ERLFSIKKDE 60
DDYVTALAIT SDSKKLIAAF RSRLLTIYEI PSGRRIKSMK AHETPVITMT IDPTNTLLAT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108361|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATGATGCT CTTAACCAAA ATCATTCATG GCGCCAATTG GGGAGAAAAA GCGGTATGTA 60
AAAGATTGAA ACACATGAAC TAATAATTAG CTTTGAGTTA GAAAAAAGCA TTGAGCCTAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108361|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08625--Utp13
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG spo:SPCC16A11.02
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000765 Aegilops tauschii 30.04 7.00e-104 369.00
IUUC-Aml-002376 Ailuropoda melanoleuca 34.05 2.00e-124 437.00
IUUC-Atr-002486 Amborella trichopoda 32.36 7.00e-123 432.00
IUUC-Apl-003519 Anas platyrhynchos 31.74 4.00e-111 393.00
IUUC-Aca-004363 Anolis carolinensis 30.80 2.00e-52 197.00
IUUC-Aly-006152 Arabidopsis lyrata 31.20 3.00e-114 404.00
IUUC-Ath-006966 Arabidopsis thaliana 31.28 3.00e-116 410.00
IUUC-Ago-007746 Ashbya gossypii 34.96 2.00e-135 474.00
IUUC-Acl-008009 Aspergillus clavatus 35.70 8.00e-150 522.00
IUUC-Afl-008681 Aspergillus flavus 34.82 2.00e-134 471.00
IUUC-Afu-008798 Aspergillus fumigatus 35.05 1.00e-137 481.00
IUUC-Ani-009278 Aspergillus nidulans 34.65 4.00e-149 520.00
IUUC-Ang-009640 Aspergillus niger 37.08 5.00e-153 533.00
IUUC-Aor-010160 Aspergillus oryzae 34.82 4.00e-134 470.00
IUUC-Ate-010320 Aspergillus terreus 35.43 6.00e-148 516.00
IUUC-Ame-010930 Astyanax mexicanus 34.01 8.00e-34 134.00
IUUC-Bgr-012054 Blumeria graminis 34.03 1.00e-134 471.00
IUUC-Bta-012611 Bos taurus 34.30 4.00e-121 427.00
IUUC-Bci-013797 Botrytis cinerea 37.18 1.00e-153 535.00
IUUC-Bdi-014384 Brachypodium distachyon 33.25 2.00e-125 441.00
IUUC-Bol-016483 Brassica oleracea 31.19 2.00e-113 401.00
IUUC-Bra-017798 Brassica rapa 30.62 2.00e-109 388.00
IUUC-Cel-018664 Caenorhabditis elegans 30.01 3.00e-101 360.00
IUUC-Cja-019092 Callithrix jacchus 33.42 7.00e-125 439.00
IUUC-Cfa-021040 Canis familiaris 33.79 6.00e-122 429.00
IUUC-Cpo-022529 Cavia porcellus 33.21 2.00e-118 418.00
IUUC-Cre-022986 Chlamydomonas reinhardtii 51.09 3.00e-41 158.00
IUUC-Csa-024205 Chlorocebus sabaeus 33.79 2.00e-125 441.00
IUUC-Cin-025560 Ciona intestinalis 33.42 9.00e-124 435.00
IUUC-Cgl-026481 Colletotrichum gloeosporioides 36.35 1.00e-151 528.00
IUUC-Cne-027082 Cryptococcus neoformans 32.97 9.00e-131 459.00
IUUC-Cme-027159 Cyanidioschyzon merolae 25.58 7.00e-33 134.00
IUUC-Dre-028138 Danio rerio 31.51 7.00e-117 412.00
IUUC-Dno-029914 Dasypus novemcinctus 31.20 2.00e-81 294.00
IUUC-Dor-030685 Dipodomys ordii 33.67 3.00e-70 258.00
IUUC-Dse-031429 Dothistroma septosporum 35.68 5.00e-147 513.00
IUUC-Dme-031995 Drosophila melanogaster 27.44 2.00e-76 278.00
IUUC-Ete-033086 Echinops telfairi 36.99 1.00e-77 282.00
IUUC-Eca-034354 Equus caballus 34.30 2.00e-121 428.00
IUUC-Eeu-034832 Erinaceus europaeus 35.18 2.00e-72 265.00
IUUC-Fca-036136 Felis catus 33.03 3.00e-118 417.00
IUUC-Fal-036859 Ficedula albicollis 32.25 2.00e-120 424.00
IUUC-Fox-037863 Fusarium oxysporum 35.38 2.00e-130 458.00
IUUC-Fso-038389 Fusarium solani 35.48 7.00e-144 502.00
IUUC-Gmo-038711 Gadus morhua 30.84 1.00e-103 369.00
IUUC-Ggr-039820 Gaeumannomyces graminis 35.05 5.00e-134 469.00
IUUC-Gga-040263 Gallus gallus 32.13 1.00e-122 431.00
IUUC-Gac-041291 Gasterosteus aculeatus 32.60 3.00e-127 447.00
IUUC-Gma-044328 Glycine max 33.33 7.00e-127 446.00
IUUC-Ggo-044693 Gorilla gorilla 33.92 4.00e-122 430.00
IUUC-Hsa-046048 Homo sapiens 33.92 4.00e-122 430.00
IUUC-Hvu-047608 Hordeum vulgare 32.44 9.00e-122 429.00
IUUC-Itr-048391 Ictidomys tridecemlineatus 33.58 2.00e-127 447.00
IUUC-Kpa-049209 Komagataella pastoris 33.85 2.00e-135 474.00
IUUC-Lch-050085 Latimeria chalumnae 31.17 3.00e-114 404.00
IUUC-Lpe-050945 Leersia perrieri 33.42 1.00e-122 432.00
IUUC-Loc-052679 Lepisosteus oculatus 32.71 3.00e-134 471.00
IUUC-Laf-053685 Loxodonta africana 34.42 8.00e-116 409.00
IUUC-Mcc-055861 Macaca mulatta 34.05 1.00e-121 428.00
IUUC-Meu-056820 Macropus eugenii 29.80 2.00e-84 305.00
IUUC-Mor-057234 Magnaporthe oryzae 33.55 7.00e-134 469.00
IUUC-Mpo-057456 Magnaporthe poae 34.66 2.00e-106 377.00
IUUC-Mtr-058122 Medicago truncatula 33.29 2.00e-125 441.00
IUUC-Mla-058980 Melampsora laricipopulina 30.53 4.00e-110 390.00
IUUC-Mga-060080 Meleagris gallopavo 31.97 3.00e-120 424.00
IUUC-Mvi-060338 Microbotryum violaceum 35.82 4.00e-139 486.00
IUUC-Mmr-060762 Microcebus murinus 34.30 7.00e-121 426.00
IUUC-Mdo-061975 Monodelphis domestica 33.25 5.00e-117 413.00
IUUC-Mmu-064038 Mus musculus 33.38 2.00e-116 411.00
IUUC-Mac-065189 Musa acuminata 31.01 2.00e-120 424.00
IUUC-Mpu-066526 Mustela putorius furo 33.92 4.00e-119 420.00
IUUC-Mlu-067716 Myotis lucifugus 34.54 2.00e-131 461.00
IUUC-Nfi-068474 Neosartorya fischeri 35.65 1.00e-140 491.00
IUUC-Ncr-068826 Neurospora crassa 35.06 2.00e-140 491.00
IUUC-Nle-069832 Nomascus leucogenys 33.79 5.00e-126 443.00
IUUC-Opr-071183 Ochotona princeps 32.94 4.00e-114 403.00
IUUC-Ont-072371 Oreochromis niloticus 33.33 1.00e-127 448.00
IUUC-Oan-073491 Ornithorhynchus anatinus 31.68 1.00e-95 342.00
IUUC-Ocu-074286 Oryctolagus cuniculus 22.56 6.00e-36 144.00
IUUC-Oba-075963 Oryza barthii 33.49 4.00e-127 446.00
IUUC-Obr-076173 Oryza brachyantha 33.87 5.00e-122 430.00
IUUC-Ogl-077692 Oryza glaberrima 33.49 6.00e-127 446.00
IUUC-Ogu-078965 Oryza glumaepatula 33.49 4.00e-127 446.00
IUUC-Oin-079708 Oryza indica 33.37 1.00e-126 445.00
IUUC-Olo-080679 Oryza longistaminata 33.01 4.00e-125 440.00
IUUC-Oni-082960 Oryza nivara 33.25 3.00e-126 444.00
IUUC-Opu-083282 Oryza punctata 32.53 1.00e-121 428.00
IUUC-Oru-085224 Oryza rufipogon 33.49 4.00e-127 447.00
IUUC-Osa-085320 Oryza sativa 33.49 4.00e-127 447.00
IUUC-Ola-086370 Oryzias latipes 25.77 6.00e-42 163.00
IUUC-Olu-087814 Ostreococcus lucimarinus 30.70 1.00e-93 335.00
IUUC-Oga-088458 Otolemur garnettii 33.79 2.00e-130 457.00
IUUC-Oar-090032 Ovis aries 31.73 5.00e-79 286.00
IUUC-Ptr-090749 Pan troglodytes 33.88 1.00e-120 425.00
IUUC-Pan-091691 Papio anubis 33.12 4.00e-114 403.00
IUUC-Psi-093200 Pelodiscus sinensis 31.33 3.00e-116 410.00
IUUC-Pma-094165 Petromyzon marinus 31.50 7.00e-86 309.00
IUUC-Pno-095048 Phaeosphaeria nodorum 38.90 3.00e-131 460.00
IUUC-Ppa-095336 Physcomitrella patens 32.80 6.00e-116 410.00
IUUC-Pfo-096132 Poecilia formosa 32.96 7.00e-122 429.00
IUUC-Pab-097855 Pongo abelii 33.79 2.00e-125 441.00
IUUC-Pop-099434 Populus trichocarpa 31.45 2.00e-112 398.00
IUUC-Pca-100232 Procavia capensis 32.57 1.00e-41 163.00
IUUC-Ppe-101665 Prunus persica 32.07 5.00e-122 430.00
IUUC-Pva-102178 Pteropus vampyrus 34.67 1.00e-126 445.00
IUUC-Pgr-103288 Puccinia graminis 30.49 2.00e-106 378.00
IUUC-Ptt-103808 Puccinia triticina 31.61 2.00e-96 345.00
IUUC-Pte-104205 Pyrenophora teres 36.70 2.00e-151 528.00
IUUC-Pyt-104658 Pyrenophora triticirepentis 35.80 1.00e-142 498.00
IUUC-Rno-105617 Rattus norvegicus 33.12 4.00e-117 413.00
IUUC-Sce-106281 Saccharomyces cerevisiae 36.07 4.00e-140 489.00
IUUC-Sha-107378 Sarcophilus harrisii 31.25 2.00e-111 394.00
IUUC-Sja-107718 Schizosaccharomyces japonicus 60.49 0.00e+00 961.00
IUUC-Ssl-108592 Sclerotinia sclerotiorum 37.49 2.00e-159 554.00
IUUC-Smo-109257 Selaginella moellendorffii 32.31 2.00e-121 428.00
IUUC-Sit-110258 Setaria italica 31.99 2.00e-126 444.00
IUUC-Sly-111521 Solanum lycopersicum 32.81 1.00e-118 418.00
IUUC-Sbi-114768 Sorghum bicolor 32.72 2.00e-126 444.00
IUUC-Sre-115159 Sporisorium reilianum 32.90 3.00e-94 338.00
IUUC-Ssc-116342 Sus scrofa 28.99 7.00e-57 213.00
IUUC-Tgu-117320 Taeniopygia guttata 31.74 3.00e-115 407.00
IUUC-Tru-118024 Takifugu rubripes 32.39 1.00e-121 428.00
IUUC-Tsy-119493 Tarsius syrichta 30.00 2.00e-31 128.00
IUUC-Tni-119971 Tetraodon nigroviridis 33.25 8.00e-124 436.00
IUUC-Tca-121248 Theobroma cacao 32.00 5.00e-113 400.00
IUUC-Tre-122079 Trichoderma reesei 35.97 2.00e-139 488.00
IUUC-Tvi-122554 Trichoderma virens 35.94 1.00e-140 491.00
IUUC-Tae-124473 Triticum aestivum 32.24 6.00e-122 429.00
IUUC-Tur-126436 Triticum urartu 30.32 4.00e-92 330.00
IUUC-Tme-126942 Tuber melanosporum 40.50 8.00e-155 538.00
IUUC-Ttr-128964 Tursiops truncatus 33.42 1.00e-124 438.00
IUUC-Uma-129473 Ustilago maydis 30.50 1.00e-100 359.00
IUUC-Vda-129749 Verticillium dahliae 36.13 1.00e-134 471.00
IUUC-Vvi-131511 Vitis vinifera 33.41 2.00e-117 414.00
IUUC-Xtr-132816 Xenopus tropicalis 29.94 1.00e-100 358.00
IUUC-Xma-133672 Xiphophorus maculatus 32.71 4.00e-123 433.00
IUUC-Yli-134602 Yarrowia lipolytica 41.00 1.00e-174 604.00
IUUC-Zma-135559 Zea mays 32.35 3.00e-121 427.00
Created Date 25-Jun-2017

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