iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017059

Ensembl Protein ID

Bra030519.1-P

UniProt Accession

M4ENZ9; M4ENZ9_BRARP

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra030519	Bra030519.1	Bra030519.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-15	55.1	197	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd...tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ vtc+ f   ++   ++l sGs+D ++++WD++tg ll 
   Q: 197  GHTEFVTCITFvqnPEfaqGYLMSGSGDSSVRLWDITTGSLLD 239
           8***********994444599******************9875 PP

Organism

Brassica rapa

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MDIEGGERQT KHEVAPALIS VHPFQKSVAI TVGSALRVFD LIENRPVSLV DESDGPSHKD 60
SIRAIRYGSS GKLFASAGDD KLVKIWSADS WHCLNTISSE KRVTAVAISS DDSYVCYADK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATATAG AAGGAGGAGA AAGGCAGACC AAACACGAGG TCGCTCCTGC ATTGATATCC 60
GTTCATCCAT TTCAGAAGTC TGTCGCTATC ACTGTCGGGT CGGCTCTTCG TGTATTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008151	Aspergillus clavatus	26.01	5.00e-14	72.00
IUUC-Afl-008518	Aspergillus flavus	31.02	5.00e-18	84.70
IUUC-Afu-009102	Aspergillus fumigatus	26.85	3.00e-12	66.60
IUUC-Aor-010133	Aspergillus oryzae	29.52	6.00e-19	88.60
IUUC-Ame-010613	Astyanax mexicanus	31.54	3.00e-25	109.00
IUUC-Bgr-012067	Blumeria graminis	32.59	8.00e-14	71.60
IUUC-Bol-015373	Brassica oleracea	93.91	0.00e+00	712.00
IUUC-Cne-026834	Cryptococcus neoformans	27.12	8.00e-15	75.10
IUUC-Kpa-049283	Komagataella pastoris	31.41	7.00e-17	81.30
IUUC-Loc-052599	Lepisosteus oculatus	28.43	2.00e-25	109.00
IUUC-Mla-059135	Melampsora laricipopulina	27.20	8.00e-18	85.10
IUUC-Mac-065625	Musa acuminata	51.40	2.00e-111	395.00
IUUC-Nfi-068402	Neosartorya fischeri	26.85	2.00e-12	67.00
IUUC-Ont-071555	Oreochromis niloticus	31.78	4.00e-23	102.00
IUUC-Psi-093792	Pelodiscus sinensis	35.96	7.00e-22	97.80
IUUC-Sja-107780	Schizosaccharomyces japonicus	27.00	6.00e-17	81.60
IUUC-Spo-108251	Schizosaccharomyces pombe	24.01	2.00e-13	70.10
IUUC-Smo-108938	Selaginella moellendorffii	37.70	2.00e-67	249.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence