iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126279

Ensembl Protein ID

TRIUR3_24922-P1

UniProt Accession

M7ZHV2; M7ZHV2_TRIUA

Genbank Protein ID

EMS59652.1

Protein Name

THO complex subunit 3

Genbank Nucleotide ID

KD118177

Gene Name

TRIUR3_24922

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_24922	TRIUR3_24922-T1	TRIUR3_24922-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-23	81.5	93	130

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgvl 35
           gH+dsv  l++    + +++++++ D++i++WD r+g++
   Q: 93   GHSDSVDQLCWdpkhP-DTVATAAADKSIRLWDARSGKC 130
           8**********97544.779****************998 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEGREDDKKG GAAAPGSSAP GTRFKNLVSR EYYSHKKKVH SVAWNCIGTK LASGSIDHTA 60
RVWSIDPHGH TANNADTTSY HTQSKVKDIE LKGHSDSVDQ LCWDPKHPDT VATAAADKSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGGGA GAGAAGACGA CAAGAAAGGC GGCGCCGCCG CCCCCGGCAG CTCAGCGCCG 60
GGGACGAGAT TCAAGAACCT GGTCTCCAGG GAATACTACA GCCACAAGAA GAAGGTACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000347--C:THO complex
GO:0010267--P:production of ta-siRNAs involved in RNA interference

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	95.81	3.00e-177	612.00
IUUC-Aml-001264	Ailuropoda melanoleuca	44.81	4.00e-83	300.00
IUUC-Atr-003050	Amborella trichopoda	73.31	8.00e-140	488.00
IUUC-Apl-003426	Anas platyrhynchos	44.80	1.00e-58	218.00
IUUC-Aca-004931	Anolis carolinensis	47.45	3.00e-56	210.00
IUUC-Aly-006237	Arabidopsis lyrata	73.08	7.00e-139	485.00
IUUC-Ath-007581	Arabidopsis thaliana	73.40	4.00e-139	486.00
IUUC-Ago-007751	Ashbya gossypii	21.95	3.00e-10	58.90
IUUC-Acl-008253	Aspergillus clavatus	28.33	7.00e-37	147.00
IUUC-Afl-008519	Aspergillus flavus	30.70	2.00e-39	155.00
IUUC-Afu-008886	Aspergillus fumigatus	26.55	5.00e-32	130.00
IUUC-Ani-009275	Aspergillus nidulans	28.24	2.00e-36	145.00
IUUC-Ang-009862	Aspergillus niger	30.92	2.00e-38	151.00
IUUC-Ate-010247	Aspergillus terreus	28.28	1.00e-35	142.00
IUUC-Ame-010828	Astyanax mexicanus	47.56	2.00e-85	307.00
IUUC-Bgr-012163	Blumeria graminis	27.13	8.00e-30	123.00
IUUC-Bta-013514	Bos taurus	41.25	1.00e-69	255.00
IUUC-Bci-013639	Botrytis cinerea	28.16	3.00e-38	150.00
IUUC-Bdi-015049	Brachypodium distachyon	90.00	3.00e-176	609.00
IUUC-Bol-015401	Brassica oleracea	71.79	4.00e-134	469.00
IUUC-Bra-017867	Brassica rapa	71.79	3.00e-134	469.00
IUUC-Cel-018699	Caenorhabditis elegans	26.71	1.00e-27	115.00
IUUC-Cja-019591	Callithrix jacchus	47.19	1.00e-83	302.00
IUUC-Cfa-020692	Canis familiaris	44.81	3.00e-83	300.00
IUUC-Cpo-022135	Cavia porcellus	40.98	3.00e-66	244.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	32.71	1.00e-44	172.00
IUUC-Csa-023408	Chlorocebus sabaeus	46.86	3.00e-83	300.00
IUUC-Cho-024340	Choloepus hoffmanni	47.87	5.00e-52	196.00
IUUC-Cin-025418	Ciona intestinalis	50.00	1.00e-37	147.00
IUUC-Csv-026130	Ciona savignyi	49.20	3.00e-89	320.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	27.99	2.00e-38	152.00
IUUC-Cne-026775	Cryptococcus neoformans	41.18	1.00e-20	93.60
IUUC-Dre-028634	Danio rerio	48.36	2.00e-86	311.00
IUUC-Dno-029449	Dasypus novemcinctus	46.86	5.00e-83	300.00
IUUC-Dor-030301	Dipodomys ordii	51.61	4.00e-48	183.00
IUUC-Dse-031341	Dothistroma septosporum	26.19	2.00e-30	125.00
IUUC-Dme-031674	Drosophila melanogaster	46.65	3.00e-78	283.00
IUUC-Ete-033136	Echinops telfairi	46.86	4.00e-82	296.00
IUUC-Eca-034432	Equus caballus	42.57	5.00e-75	273.00
IUUC-Fca-035694	Felis catus	44.81	3.00e-83	300.00
IUUC-Fal-037328	Ficedula albicollis	45.79	4.00e-84	303.00
IUUC-Fox-037894	Fusarium oxysporum	28.93	6.00e-41	160.00
IUUC-Fso-038266	Fusarium solani	27.16	5.00e-37	147.00
IUUC-Gmo-039617	Gadus morhua	47.56	7.00e-84	302.00
IUUC-Ggr-039819	Gaeumannomyces graminis	24.75	1.00e-30	126.00
IUUC-Gga-041164	Gallus gallus	45.79	5.00e-84	303.00
IUUC-Gac-042407	Gasterosteus aculeatus	48.67	5.00e-85	306.00
IUUC-Gma-043718	Glycine max	73.31	6.00e-141	492.00
IUUC-Ggo-044989	Gorilla gorilla	46.86	3.00e-83	301.00
IUUC-Hsa-046784	Homo sapiens	46.86	2.00e-83	301.00
IUUC-Hvu-047633	Hordeum vulgare	99.03	7.00e-123	431.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	33.55	1.00e-44	172.00
IUUC-Lch-049894	Latimeria chalumnae	46.84	6.00e-83	299.00
IUUC-Lpe-051061	Leersia perrieri	75.07	2.00e-141	493.00
IUUC-Loc-052424	Lepisosteus oculatus	47.23	3.00e-84	303.00
IUUC-Lma-053127	Leptosphaeria maculans	29.90	9.00e-41	160.00
IUUC-Laf-053396	Loxodonta africana	47.19	2.00e-83	301.00
IUUC-Mcc-055517	Macaca mulatta	46.86	2.00e-83	301.00
IUUC-Meu-056034	Macropus eugenii	46.86	2.00e-82	298.00
IUUC-Mor-057011	Magnaporthe oryzae	24.45	9.00e-23	100.00
IUUC-Mpo-057490	Magnaporthe poae	24.75	1.00e-30	125.00
IUUC-Mtr-057927	Medicago truncatula	73.31	2.00e-140	490.00
IUUC-Mla-058945	Melampsora laricipopulina	34.42	2.00e-45	174.00
IUUC-Mga-060155	Meleagris gallopavo	46.46	1.00e-69	255.00
IUUC-Mvi-060344	Microbotryum violaceum	28.57	2.00e-37	149.00
IUUC-Mmr-060834	Microcebus murinus	47.19	3.00e-83	300.00
IUUC-Mdo-062587	Monodelphis domestica	46.86	3.00e-82	297.00
IUUC-Mmu-063395	Mus musculus	46.86	5.00e-83	300.00
IUUC-Mac-064579	Musa acuminata	78.46	2.00e-148	517.00
IUUC-Mpu-066688	Mustela putorius furo	45.67	2.00e-75	275.00
IUUC-Mlu-067299	Myotis lucifugus	46.86	1.00e-82	298.00
IUUC-Nfi-068562	Neosartorya fischeri	27.62	5.00e-34	137.00
IUUC-Ncr-068654	Neurospora crassa	26.26	1.00e-31	129.00
IUUC-Nle-069736	Nomascus leucogenys	46.20	5.00e-81	293.00
IUUC-Ont-071763	Oreochromis niloticus	48.00	2.00e-84	304.00
IUUC-Ocu-074909	Oryctolagus cuniculus	46.86	6.00e-83	300.00
IUUC-Oba-075902	Oryza barthii	76.26	1.00e-143	501.00
IUUC-Obr-076613	Oryza brachyantha	82.84	1.00e-160	558.00
IUUC-Ogl-077009	Oryza glaberrima	84.57	3.00e-165	573.00
IUUC-Ogu-078344	Oryza glumaepatula	76.26	1.00e-143	501.00
IUUC-Oin-079773	Oryza indica	84.57	3.00e-165	573.00
IUUC-Olo-080474	Oryza longistaminata	83.57	2.00e-99	353.00
IUUC-Ome-081837	Oryza meridionalis	71.86	2.00e-74	270.00
IUUC-Oni-082263	Oryza nivara	76.26	1.00e-143	501.00
IUUC-Opu-083813	Oryza punctata	85.16	3.00e-167	579.00
IUUC-Oru-084610	Oryza rufipogon	75.96	3.00e-143	499.00
IUUC-Osa-085415	Oryza sativa	84.27	1.00e-164	571.00
IUUC-Ola-086659	Oryzias latipes	48.00	2.00e-84	305.00
IUUC-Olu-087649	Ostreococcus lucimarinus	40.48	2.00e-57	215.00
IUUC-Oga-087923	Otolemur garnettii	46.53	1.00e-82	298.00
IUUC-Oar-089688	Ovis aries	44.81	9.00e-82	295.00
IUUC-Ptr-091628	Pan troglodytes	46.86	2.00e-83	301.00
IUUC-Pan-092586	Papio anubis	46.08	3.00e-82	297.00
IUUC-Psi-093701	Pelodiscus sinensis	47.67	4.00e-56	209.00
IUUC-Pma-094465	Petromyzon marinus	47.14	6.00e-82	296.00
IUUC-Pno-094767	Phaeosphaeria nodorum	31.10	4.00e-40	158.00
IUUC-Ppa-095195	Physcomitrella patens	70.37	2.00e-139	487.00
IUUC-Pfo-097383	Poecilia formosa	47.67	2.00e-83	301.00
IUUC-Pab-098669	Pongo abelii	46.86	2.00e-83	301.00
IUUC-Pop-099409	Populus trichocarpa	73.31	1.00e-140	491.00
IUUC-Pca-100769	Procavia capensis	41.69	2.00e-63	234.00
IUUC-Ppe-101321	Prunus persica	73.95	2.00e-140	491.00
IUUC-Pva-102759	Pteropus vampyrus	44.81	2.00e-83	301.00
IUUC-Pgr-103535	Puccinia graminis	34.67	8.00e-50	189.00
IUUC-Ptt-103820	Puccinia triticina	34.77	9.00e-50	189.00
IUUC-Pte-104271	Pyrenophora teres	29.27	3.00e-36	144.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	31.37	7.00e-35	140.00
IUUC-Rno-106126	Rattus norvegicus	46.86	4.00e-83	300.00
IUUC-Sce-106455	Saccharomyces cerevisiae	26.09	2.00e-11	62.80
IUUC-Sha-107146	Sarcophilus harrisii	45.87	3.00e-80	290.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	34.30	5.00e-51	193.00
IUUC-Spo-108324	Schizosaccharomyces pombe	39.30	2.00e-52	198.00
IUUC-Smo-108990	Selaginella moellendorffii	66.88	2.00e-129	454.00
IUUC-Sit-110773	Setaria italica	81.31	3.00e-161	560.00
IUUC-Sly-111619	Solanum lycopersicum	75.56	5.00e-145	505.00
IUUC-Stu-112241	Solanum tuberosum	75.56	3.00e-144	503.00
IUUC-Sbi-114842	Sorghum bicolor	81.19	5.00e-159	552.00
IUUC-Sre-115070	Sporisorium reilianum	33.82	7.00e-47	180.00
IUUC-Ssc-115581	Sus scrofa	44.81	3.00e-83	300.00
IUUC-Tgu-117354	Taeniopygia guttata	45.17	8.00e-82	295.00
IUUC-Tru-117745	Takifugu rubripes	46.58	5.00e-83	299.00
IUUC-Tni-120050	Tetraodon nigroviridis	45.93	2.00e-81	295.00
IUUC-Tca-121279	Theobroma cacao	74.28	2.00e-141	493.00
IUUC-Tre-121952	Trichoderma reesei	28.28	6.00e-39	153.00
IUUC-Tvi-122581	Trichoderma virens	27.90	4.00e-40	157.00
IUUC-Tae-123910	Triticum aestivum	95.93	0.00e+00	652.00
IUUC-Tme-127000	Tuber melanosporum	30.42	1.00e-38	152.00
IUUC-Ttr-128405	Tursiops truncatus	49.19	4.00e-73	266.00
IUUC-Uma-129547	Ustilago maydis	34.20	1.00e-44	172.00
IUUC-Vda-129689	Verticillium dahliae	27.37	1.00e-29	122.00
IUUC-Vvi-131345	Vitis vinifera	73.63	3.00e-141	493.00
IUUC-Xtr-132136	Xenopus tropicalis	46.49	6.00e-81	293.00
IUUC-Xma-133767	Xiphophorus maculatus	47.67	2.00e-83	301.00
IUUC-Yli-134522	Yarrowia lipolytica	26.36	2.00e-28	119.00
IUUC-Zma-135816	Zea mays	80.00	7.00e-156	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence