iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s15270	POPTR_0014s15270.1	POPTR_0014s15270.1
POPTR_0014s15270	POPTR_0014s15270.3	POPTR_0014s15270.3
POPTR_0014s15270	POPTR_0014s15270.2	POPTR_0014s15270.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	29.3	615	654

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+e+ +d p+v++C H f+++Cl  +    + s +e +CP+C
   Q: 615  CGICHEPAED-PVVTSCAHGFCKTCLLDF----SASFGEVSCPVC 654
           9*********.999************888....889********* PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MELRSRRRLS GLSINGDGEH GESGSCNEED GNNYMGGGGG GGGDGSDDEF YVLSSDSDDN 60
SFGEMTEEMG DLLLNHQAKA TIGVHDWQGP INEQQPAEQS TASQKKKYYK TNKRRKKRSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATGAAGAA ATTTTGGAGG ACATTGTCTT GCTCAGACAG ACGATGAAGG AAAGAGTGAG 60
GTAGGTAGGT AGACCACAGT AACTAACTCT GTTTCCCGCC GATTAGGCCT TTATATATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	64.12	0.00e+00	881.00
IUUC-Atr-002602	Amborella trichopoda	72.07	0.00e+00	714.00
IUUC-Aly-005572	Arabidopsis lyrata	67.20	0.00e+00	1057.00
IUUC-Ath-007571	Arabidopsis thaliana	68.39	0.00e+00	1066.00
IUUC-Ago-007980	Ashbya gossypii	45.09	1.00e-127	449.00
IUUC-Acl-008061	Aspergillus clavatus	42.48	5.00e-117	414.00
IUUC-Afl-008389	Aspergillus flavus	41.88	5.00e-116	411.00
IUUC-Afu-008775	Aspergillus fumigatus	41.39	2.00e-110	393.00
IUUC-Ani-009475	Aspergillus nidulans	38.75	8.00e-74	271.00
IUUC-Ang-009813	Aspergillus niger	42.60	6.00e-118	418.00
IUUC-Aor-009994	Aspergillus oryzae	41.88	5.00e-116	411.00
IUUC-Ate-010405	Aspergillus terreus	42.48	2.00e-117	416.00
IUUC-Bgr-012279	Blumeria graminis	36.16	2.00e-128	453.00
IUUC-Bci-013844	Botrytis cinerea	42.02	5.00e-112	398.00
IUUC-Bdi-015009	Brachypodium distachyon	61.21	0.00e+00	896.00
IUUC-Bol-016388	Brassica oleracea	59.89	0.00e+00	857.00
IUUC-Bra-017729	Brassica rapa	59.68	0.00e+00	919.00
IUUC-Cgl-026730	Colletotrichum gloeosporioides	43.03	5.00e-118	418.00
IUUC-Cne-026934	Cryptococcus neoformans	46.28	9.00e-115	407.00
IUUC-Dse-031540	Dothistroma septosporum	41.21	1.00e-114	407.00
IUUC-Fox-037709	Fusarium oxysporum	43.52	8.00e-121	427.00
IUUC-Fso-038218	Fusarium solani	44.33	2.00e-122	433.00
IUUC-Ggr-040094	Gaeumannomyces graminis	42.91	1.00e-119	424.00
IUUC-Gga-040472	Gallus gallus	28.03	1.00e-51	198.00
IUUC-Gma-042935	Glycine max	72.69	0.00e+00	1120.00
IUUC-Hvu-047660	Hordeum vulgare	66.55	0.00e+00	721.00
IUUC-Kpa-049222	Komagataella pastoris	44.62	4.00e-128	451.00
IUUC-Lpe-050970	Leersia perrieri	58.73	0.00e+00	839.00
IUUC-Lma-053125	Leptosphaeria maculans	42.86	8.00e-116	411.00
IUUC-Mor-056942	Magnaporthe oryzae	36.73	3.00e-130	459.00
IUUC-Mpo-057611	Magnaporthe poae	42.51	4.00e-118	419.00
IUUC-Mtr-058123	Medicago truncatula	72.99	0.00e+00	1059.00
IUUC-Mla-059170	Melampsora laricipopulina	48.90	8.00e-134	470.00
IUUC-Mvi-060400	Microbotryum violaceum	49.19	3.00e-139	489.00
IUUC-Mac-065269	Musa acuminata	67.29	2.00e-168	585.00
IUUC-Nfi-068347	Neosartorya fischeri	42.37	1.00e-117	417.00
IUUC-Ncr-068941	Neurospora crassa	43.43	3.00e-121	429.00
IUUC-Obr-076549	Oryza brachyantha	64.26	0.00e+00	851.00
IUUC-Ogl-077889	Oryza glaberrima	66.04	0.00e+00	838.00
IUUC-Ogu-078593	Oryza glumaepatula	61.94	0.00e+00	744.00
IUUC-Oin-080110	Oryza indica	56.07	0.00e+00	758.00
IUUC-Olo-080282	Oryza longistaminata	58.86	0.00e+00	757.00
IUUC-Ome-081180	Oryza meridionalis	57.78	0.00e+00	827.00
IUUC-Oni-082941	Oryza nivara	61.94	0.00e+00	744.00
IUUC-Opu-083720	Oryza punctata	57.97	0.00e+00	812.00
IUUC-Oru-085272	Oryza rufipogon	56.37	0.00e+00	785.00
IUUC-Osa-085537	Oryza sativa	65.45	0.00e+00	820.00
IUUC-Olu-087669	Ostreococcus lucimarinus	42.72	5.00e-126	445.00
IUUC-Pma-094750	Petromyzon marinus	31.54	1.00e-28	119.00
IUUC-Pno-094792	Phaeosphaeria nodorum	42.34	7.00e-116	411.00
IUUC-Ppe-102071	Prunus persica	73.11	0.00e+00	1164.00
IUUC-Pgr-103403	Puccinia graminis	47.13	1.00e-132	467.00
IUUC-Ptt-103966	Puccinia triticina	47.39	2.00e-125	443.00
IUUC-Pte-104264	Pyrenophora teres	41.94	6.00e-116	411.00
IUUC-Pyt-104815	Pyrenophora triticirepentis	41.94	1.00e-115	410.00
IUUC-Sce-106159	Saccharomyces cerevisiae	45.49	4.00e-130	458.00
IUUC-Sja-107959	Schizosaccharomyces japonicus	50.30	2.00e-142	499.00
IUUC-Spo-108338	Schizosaccharomyces pombe	47.70	2.00e-137	482.00
IUUC-Ssl-108523	Sclerotinia sclerotiorum	42.63	1.00e-112	400.00
IUUC-Smo-109139	Selaginella moellendorffii	56.76	4.00e-157	547.00
IUUC-Sit-110565	Setaria italica	64.88	0.00e+00	797.00
IUUC-Sly-110871	Solanum lycopersicum	65.80	0.00e+00	912.00
IUUC-Stu-112856	Solanum tuberosum	71.13	0.00e+00	1106.00
IUUC-Sbi-114800	Sorghum bicolor	60.52	0.00e+00	890.00
IUUC-Sre-114938	Sporisorium reilianum	47.59	6.00e-133	468.00
IUUC-Tca-121230	Theobroma cacao	67.59	0.00e+00	1204.00
IUUC-Tre-122065	Trichoderma reesei	43.72	9.00e-121	427.00
IUUC-Tvi-122398	Trichoderma virens	43.93	6.00e-122	431.00
IUUC-Tae-125864	Triticum aestivum	62.48	0.00e+00	900.00
IUUC-Tur-126489	Triticum urartu	59.07	0.00e+00	694.00
IUUC-Uma-129441	Ustilago maydis	47.59	4.00e-133	468.00
IUUC-Vda-129735	Verticillium dahliae	43.26	1.00e-120	427.00
IUUC-Vvi-131253	Vitis vinifera	74.22	0.00e+00	1143.00
IUUC-Yli-134350	Yarrowia lipolytica	46.06	2.00e-128	452.00
IUUC-Zma-135113	Zea mays	61.72	0.00e+00	901.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence