iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017930

Ensembl Protein ID

Bra005123.1-P

UniProt Accession

M4CLN6; M4CLN6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005123	Bra005123.1	Bra005123.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	6.20e-08	33.9	206	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 2    DvilvvggeeffahkivLaasSsvFyalflmeleesksklmveik..dvqpevfrallkFlYtgkld 66
           D+ +++g+ee+++ ++ +a+ S++F+ +++++++e++  + +++   +v+ e +ra   F++  k++
   Q: 206  DMSFCIGDEEVRCVRYKIASLSRPFKVMLYGGFRETR-LSAINFAlnGVSVEGMRAAEAFSRIHKVE 271
           99**********************************9.9999999845************9998876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MQPNLFTTMR SLKLIEGCKA TQVYPSSSPP PPPSTGLREK LLHHLQDHFR VNSTRSKPSH 60
THQNASVSSD SLLLPHGLPV SDLLEPHIDP SLRFVDSIEK LAEVHRRIEN CPNLEKSEAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGCCTA ATCTCTTCAC AACGATGCGA AGCTTGAAGC TTATCGAAGG ATGCAAAGCC 60
ACGCAGGTCT ACCCTTCTTC CTCTCCCCCT CCTCCTCCGT CCACCGGCCT CCGTGAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR011333--SKP1/BTB/POZ
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

PROSITE

PS50005--TPR
PS50293--TPR_REGION

Pfam

PF13181--TPR_8

SMART

SM00028--TPR

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016063	Brassica oleracea	92.52	0.00e+00	1727.00
IUUC-Ssl-108459	Sclerotinia sclerotiorum	30.23	2.90e-01	29.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence