iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104571

Ensembl Protein ID

EDU50454

UniProt Accession

B2WC26; B2WC26_PYRTR

Genbank Protein ID

EDU50454.1

Protein Name

U4/U6 small nuclear ribonucleoprotein Prp4

Genbank Nucleotide ID

DS231622

Gene Name

PTRG_07535

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_07535	EDU50454	EDU50454

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-34	116.4	372	404
UBD/Beta-Prp	5.80e-52	176.0	191	422

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H  +++++++ +d ++l+sGs+Dg +k+WD+r 
   Q: 372  HIKPIYSIDWaTDgHRLLSGSGDGFMKCWDVRA 404
           7789*******99899**************986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgk...........ilvtgseDrtikvwdlstgkcvhtlkgheds 96
           + + +++ v +sp+++++a g + g++ + ++ ++   + +  gh++ +t +++ p +             +++g+  + +++w+l++ k+v+tl+gh+d+
   Q: 191  TADRPVSIVRVSPNGKYVAYGTWGGKVALLEIPSMEPKKAYrGGHTERTTGIDWMPGATldgsnvstssvNFASGGAGGKVQLWSLDDDKPVRTLEGHSDR 291
           567899999******************9999998888777866777776666666655555555555555899999************************* PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
           v+ ++f+psg +l+s+s+d t r+wd++tgq+l  +++gh++ v  v++++dg+l+++++lD++ r+Wd++tg++++ l++ h +++ys+++  +g +l+s
   Q: 292  VCRVAFHPSGRYLASASDDTTWRLWDVNTGQELL-MQEGHSKEVYAVSFNGDGSLIATAGLDSIGRVWDVRTGRVIYMLES-HIKPIYSIDWATDGHRLLS 390
           **********************************.*********************************************9.******************* PP
   S: 198  gsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           gs dg  k wd+++ +  ++  + t  v+++r
   Q: 391  GSGDGFMKCWDVRAMRETNSIAANTGGVTDLR 422
           *************7666666666666666655 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MSMHPARQAY VEEEDGADNA MEGIDLASVP LDRNHAMPGG GNASASSLME DFDRKRRAAQ 60
LIVPTADRDV KARLRARGEP ITLFGEGPSE RRDRLRALLA AAAEALGEDA PDVEMQDAEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCATGC ACCCAGCGCG ACAGGCTTAT GTCGAGGAAG AGGATGGCGC GGTAAGTACC 60
CAGCATTCAT ATATCCTGGA TTTGGCAAGA GAGCTTCACG TGCTGCATAG CTATCTGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000498	Aegilops tauschii	36.98	7.00e-66	242.00
IUUC-Aml-001737	Ailuropoda melanoleuca	38.23	3.00e-83	300.00
IUUC-Atr-002828	Amborella trichopoda	36.71	3.00e-72	264.00
IUUC-Apl-003723	Anas platyrhynchos	38.44	4.00e-84	303.00
IUUC-Aca-004972	Anolis carolinensis	38.01	9.00e-82	295.00
IUUC-Aly-006531	Arabidopsis lyrata	36.23	8.00e-63	233.00
IUUC-Ath-007367	Arabidopsis thaliana	35.23	2.00e-72	264.00
IUUC-Ago-007893	Ashbya gossypii	34.90	1.00e-64	238.00
IUUC-Acl-008236	Aspergillus clavatus	54.74	4.00e-149	519.00
IUUC-Afl-008522	Aspergillus flavus	56.25	1.00e-157	547.00
IUUC-Afu-008904	Aspergillus fumigatus	54.75	2.00e-151	526.00
IUUC-Ani-009198	Aspergillus nidulans	56.13	3.00e-157	546.00
IUUC-Ang-009662	Aspergillus niger	54.63	1.00e-151	527.00
IUUC-Aor-009881	Aspergillus oryzae	55.30	2.00e-157	547.00
IUUC-Ate-010333	Aspergillus terreus	53.67	2.00e-141	493.00
IUUC-Ame-011697	Astyanax mexicanus	38.30	9.00e-87	312.00
IUUC-Bgr-012254	Blumeria graminis	56.98	2.00e-163	567.00
IUUC-Bta-012615	Bos taurus	38.23	2.00e-83	301.00
IUUC-Bci-013720	Botrytis cinerea	58.21	1.00e-167	580.00
IUUC-Bdi-014302	Brachypodium distachyon	36.99	4.00e-71	260.00
IUUC-Bol-015594	Brassica oleracea	36.29	8.00e-67	246.00
IUUC-Bra-017465	Brassica rapa	36.08	1.00e-66	245.00
IUUC-Cel-018632	Caenorhabditis elegans	34.77	6.00e-69	253.00
IUUC-Cja-019747	Callithrix jacchus	38.23	2.00e-83	301.00
IUUC-Cfa-020288	Canis familiaris	38.23	2.00e-83	301.00
IUUC-Cpo-021440	Cavia porcellus	38.23	3.00e-83	300.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	34.99	3.00e-55	206.00
IUUC-Csa-023139	Chlorocebus sabaeus	37.18	5.00e-66	242.00
IUUC-Cho-024481	Choloepus hoffmanni	36.93	5.00e-77	280.00
IUUC-Cin-025106	Ciona intestinalis	35.74	1.00e-77	282.00
IUUC-Csv-026087	Ciona savignyi	36.81	3.00e-78	283.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	56.84	5.00e-162	563.00
IUUC-Cne-026793	Cryptococcus neoformans	43.90	2.00e-99	354.00
IUUC-Dre-028723	Danio rerio	39.09	5.00e-85	306.00
IUUC-Dno-029299	Dasypus novemcinctus	38.01	9.00e-83	298.00
IUUC-Dse-031562	Dothistroma septosporum	56.82	4.00e-162	562.00
IUUC-Dme-031783	Drosophila melanogaster	35.19	5.00e-73	266.00
IUUC-Ete-032669	Echinops telfairi	38.23	1.00e-83	301.00
IUUC-Eca-033566	Equus caballus	38.23	4.00e-83	300.00
IUUC-Eeu-034524	Erinaceus europaeus	44.16	9.00e-55	206.00
IUUC-Fca-036215	Felis catus	38.23	2.00e-83	300.00
IUUC-Fal-037018	Ficedula albicollis	40.90	5.00e-74	270.00
IUUC-Fox-037936	Fusarium oxysporum	55.53	9.00e-163	564.00
IUUC-Fso-038366	Fusarium solani	57.17	1.00e-164	571.00
IUUC-Gmo-038966	Gadus morhua	33.42	1.00e-57	214.00
IUUC-Ggr-039942	Gaeumannomyces graminis	57.14	2.00e-164	570.00
IUUC-Gga-040797	Gallus gallus	38.44	8.00e-84	302.00
IUUC-Gac-042598	Gasterosteus aculeatus	37.64	2.00e-79	288.00
IUUC-Gma-044220	Glycine max	36.94	1.00e-70	259.00
IUUC-Ggo-044682	Gorilla gorilla	38.23	5.00e-83	300.00
IUUC-Hsa-045804	Homo sapiens	38.23	2.00e-83	301.00
IUUC-Hvu-047567	Hordeum vulgare	37.47	3.00e-67	246.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	38.01	5.00e-83	300.00
IUUC-Kpa-049369	Komagataella pastoris	35.09	6.00e-65	239.00
IUUC-Lch-050074	Latimeria chalumnae	36.67	1.00e-70	258.00
IUUC-Lpe-051333	Leersia perrieri	36.56	3.00e-64	237.00
IUUC-Loc-052164	Lepisosteus oculatus	38.09	1.00e-84	305.00
IUUC-Lma-053088	Leptosphaeria maculans	87.77	0.00e+00	905.00
IUUC-Laf-053460	Loxodonta africana	38.23	2.00e-83	301.00
IUUC-Mcc-055859	Macaca mulatta	38.23	2.00e-83	300.00
IUUC-Meu-056134	Macropus eugenii	38.01	2.00e-83	301.00
IUUC-Mor-057251	Magnaporthe oryzae	52.94	4.00e-150	522.00
IUUC-Mpo-057375	Magnaporthe poae	61.63	4.00e-96	342.00
IUUC-Mtr-058546	Medicago truncatula	36.19	2.00e-69	254.00
IUUC-Mla-059145	Melampsora laricipopulina	43.72	8.00e-97	345.00
IUUC-Mga-059855	Meleagris gallopavo	38.44	7.00e-84	302.00
IUUC-Mvi-060372	Microbotryum violaceum	39.41	3.00e-80	290.00
IUUC-Mmr-060826	Microcebus murinus	38.23	3.00e-83	300.00
IUUC-Mdo-062748	Monodelphis domestica	37.80	4.00e-83	300.00
IUUC-Mmu-063351	Mus musculus	38.23	6.00e-83	299.00
IUUC-Mac-064846	Musa acuminata	35.78	4.00e-61	226.00
IUUC-Mpu-066006	Mustela putorius furo	38.23	2.00e-83	300.00
IUUC-Mlu-067398	Myotis lucifugus	38.23	4.00e-83	300.00
IUUC-Nfi-068399	Neosartorya fischeri	55.31	4.00e-159	552.00
IUUC-Ncr-068711	Neurospora crassa	56.90	3.00e-168	583.00
IUUC-Nle-069982	Nomascus leucogenys	38.23	2.00e-83	301.00
IUUC-Opr-070596	Ochotona princeps	37.80	1.00e-82	298.00
IUUC-Ont-072374	Oreochromis niloticus	37.50	9.00e-80	289.00
IUUC-Oan-073166	Ornithorhynchus anatinus	36.36	9.00e-72	262.00
IUUC-Ocu-074371	Oryctolagus cuniculus	38.01	7.00e-83	299.00
IUUC-Oba-075083	Oryza barthii	37.04	2.00e-67	248.00
IUUC-Obr-076405	Oryza brachyantha	37.22	3.00e-66	243.00
IUUC-Ogl-077683	Oryza glaberrima	37.04	3.00e-67	247.00
IUUC-Ogu-078486	Oryza glumaepatula	36.83	1.00e-66	245.00
IUUC-Oin-079679	Oryza indica	36.83	3.00e-70	257.00
IUUC-Olo-080243	Oryza longistaminata	36.46	3.00e-61	226.00
IUUC-Ome-081230	Oryza meridionalis	36.83	3.00e-70	257.00
IUUC-Oni-082961	Oryza nivara	36.83	3.00e-70	257.00
IUUC-Opu-083189	Oryza punctata	37.04	2.00e-67	248.00
IUUC-Oru-084353	Oryza rufipogon	37.14	3.00e-68	250.00
IUUC-Osa-085458	Oryza sativa	36.83	3.00e-70	257.00
IUUC-Ola-086940	Oryzias latipes	38.97	5.00e-86	309.00
IUUC-Olu-087580	Ostreococcus lucimarinus	35.76	1.00e-54	205.00
IUUC-Oga-088703	Otolemur garnettii	35.85	5.00e-74	270.00
IUUC-Oar-089829	Ovis aries	38.23	4.00e-83	300.00
IUUC-Ptr-090838	Pan troglodytes	38.23	2.00e-83	301.00
IUUC-Pan-092261	Papio anubis	37.37	2.00e-84	304.00
IUUC-Psi-093020	Pelodiscus sinensis	38.01	3.00e-84	303.00
IUUC-Pno-094858	Phaeosphaeria nodorum	82.91	0.00e+00	839.00
IUUC-Ppa-095531	Physcomitrella patens	36.22	5.00e-69	253.00
IUUC-Pfo-096812	Poecilia formosa	34.50	5.00e-63	233.00
IUUC-Pab-097805	Pongo abelii	37.34	2.00e-66	244.00
IUUC-Pop-100051	Populus trichocarpa	34.81	6.00e-67	246.00
IUUC-Pca-100152	Procavia capensis	38.23	2.00e-83	300.00
IUUC-Ppe-101244	Prunus persica	37.18	2.00e-71	260.00
IUUC-Pva-102529	Pteropus vampyrus	36.50	3.00e-75	274.00
IUUC-Pgr-103550	Puccinia graminis	40.00	8.00e-106	375.00
IUUC-Ptt-103951	Puccinia triticina	41.55	4.00e-79	287.00
IUUC-Pte-104151	Pyrenophora teres	96.89	0.00e+00	949.00
IUUC-Rno-105747	Rattus norvegicus	38.23	1.00e-82	298.00
IUUC-Sce-106418	Saccharomyces cerevisiae	34.45	2.00e-65	241.00
IUUC-Sha-107334	Sarcophilus harrisii	38.01	2.00e-83	301.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	38.26	3.00e-69	254.00
IUUC-Spo-108189	Schizosaccharomyces pombe	37.58	6.00e-75	272.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	57.44	1.00e-167	581.00
IUUC-Smo-109578	Selaginella moellendorffii	35.03	1.00e-68	251.00
IUUC-Sit-110102	Setaria italica	34.75	7.00e-69	253.00
IUUC-Sly-111668	Solanum lycopersicum	36.75	2.00e-73	267.00
IUUC-Stu-111928	Solanum tuberosum	36.54	4.00e-73	267.00
IUUC-Sar-113266	Sorex araneus	35.25	7.00e-66	243.00
IUUC-Sbi-114134	Sorghum bicolor	34.12	1.00e-67	248.00
IUUC-Sre-115114	Sporisorium reilianum	41.75	2.00e-95	340.00
IUUC-Ssc-115443	Sus scrofa	38.23	2.00e-83	301.00
IUUC-Tgu-117157	Taeniopygia guttata	37.80	1.00e-82	298.00
IUUC-Tru-118587	Takifugu rubripes	37.42	3.00e-81	293.00
IUUC-Tsy-119157	Tarsius syrichta	37.86	2.00e-72	265.00
IUUC-Tni-120427	Tetraodon nigroviridis	38.77	1.00e-81	295.00
IUUC-Tca-121368	Theobroma cacao	34.18	9.00e-71	259.00
IUUC-Tre-122074	Trichoderma reesei	55.98	2.00e-159	553.00
IUUC-Tvi-122349	Trichoderma virens	56.21	2.00e-160	556.00
IUUC-Tae-124256	Triticum aestivum	36.60	6.00e-68	249.00
IUUC-Tur-126532	Triticum urartu	39.49	4.00e-63	233.00
IUUC-Tme-126951	Tuber melanosporum	50.09	5.00e-129	452.00
IUUC-Tbe-128136	Tupaia belangeri	35.42	1.00e-69	255.00
IUUC-Ttr-129169	Tursiops truncatus	39.31	9.00e-48	182.00
IUUC-Uma-129399	Ustilago maydis	42.55	3.00e-99	353.00
IUUC-Vda-129842	Verticillium dahliae	57.80	5.00e-162	562.00
IUUC-Vpa-130440	Vicugna pacos	38.23	2.00e-83	301.00
IUUC-Vvi-131075	Vitis vinifera	36.67	5.00e-73	266.00
IUUC-Xma-133002	Xiphophorus maculatus	36.91	1.00e-66	244.00
IUUC-Yli-134569	Yarrowia lipolytica	32.06	2.00e-67	248.00
IUUC-Zma-135799	Zea mays	33.94	2.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence