iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027638

UUCD1 version

UUC-DaR-00379

Ensembl Protein ID

ENSDARP00000137267.1

UniProt Accession

A0A0R4IRQ4; A0A0R4IRQ4_DANRE

Genbank Protein ID

ENSDARP00000137267

Protein Name

Striatin, calmodulin-binding protein 4

Genbank Nucleotide ID

BX324136

Gene Name

strn4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000102902.1	ENSDART00000161930.1	ENSDARP00000137267.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-29	101.8	558	590
UBD/Beta-Prp	2.40e-54	185.5	548	766

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+d v++laf s+  +l+s+s Dgt+++WD++
   Q: 558  GHEDAVWGLAFsSSlQRLASCSADGTVRIWDPH 590
           8**********98899***************75 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlk.....ghedsvlslsfspsgdklvsGshdrtirvwd 122
           ++g   + lsghe++v+ + fs++ + l+++s D+t+++wd+  +++cv++++     g   sv  ++ +p ++++vs +  +t+ ++d
   Q: 548  DPGVESSVLSGHEDAVWGLAFSSSLQRLASCSADGTVRIWDPHnSSPCVSVFNkekehGTPTSVAFVNADP-SQVVVSFDGGETL-LYD 634
           344445567*******************************8873677888888776555556666666666.6777777777776.8** PP
   S: 123  letgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
           l+t+q +       +  ++++n vv+hp++ + ++++ +rt+r+ d +tgk+++ +   h d+v++l+ d++g++l+sgs+d +v+lw 
   Q: 635  LNTEQSIMVletQTKDGSELINRVVSHPSQPISITAHENRTIRFLDNNTGKVIHSMVA-HLDAVTCLATDPKGTYLISGSHDCSVRLWM 722
           ******99644322233579************************************98.****************************** PP
   S: 209  lqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiri 248
           l + +cv++ ++h+    + + +v+f+p + +++s+++D   +i
   Q: 723  LDNRTCVQEITAHRkkhdEAIHDVAFHPSQPFIASAGADALAKI 766
           ************99888899******************987665 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MEAERSGGMA GGTSQSPAGS GTGRNPNGPK AVLGPAPSAV AAAAAGPMAG SSQSRDQQDG 60
DAGLSLPGIL HFIQYEWSRF QAEKYRWEAE RDELRAQVAF LQGERKGQEN MKQDLVRRIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCATGAAGTA GTAACGCATG CAGCTAGTCT GGGGTAGGAG TGGATCACTA TTTGGCACTT 60
CAGTGTGTAT GAGACAGTGC TCGCCTATCT GTACCAGGCA GGAAAACGGG AGAGGGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

dre:562780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004552	Anolis carolinensis	62.81	0.00e+00	824.00
IUUC-Acl-008170	Aspergillus clavatus	27.64	1.00e-29	125.00
IUUC-Afl-008585	Aspergillus flavus	27.42	3.00e-33	137.00
IUUC-Ani-009405	Aspergillus nidulans	30.67	3.00e-35	144.00
IUUC-Aor-009982	Aspergillus oryzae	27.42	4.00e-33	137.00
IUUC-Ame-010825	Astyanax mexicanus	76.51	0.00e+00	910.00
IUUC-Bgr-012143	Blumeria graminis	27.46	3.00e-38	153.00
IUUC-Bta-012550	Bos taurus	59.26	0.00e+00	699.00
IUUC-Bci-013742	Botrytis cinerea	26.32	3.00e-35	143.00
IUUC-Cfa-020268	Canis familiaris	61.80	0.00e+00	710.00
IUUC-Cpo-022102	Cavia porcellus	61.52	0.00e+00	721.00
IUUC-Csa-023969	Chlorocebus sabaeus	62.24	0.00e+00	740.00
IUUC-Cin-025167	Ciona intestinalis	44.82	5.00e-160	558.00
IUUC-Cgl-026487	Colletotrichum gloeosporioides	28.03	7.00e-32	132.00
IUUC-Dor-031032	Dipodomys ordii	60.42	0.00e+00	708.00
IUUC-Eca-033515	Equus caballus	60.70	0.00e+00	723.00
IUUC-Fca-035749	Felis catus	60.77	0.00e+00	683.00
IUUC-Gmo-039274	Gadus morhua	82.00	0.00e+00	1087.00
IUUC-Ggr-039846	Gaeumannomyces graminis	26.80	4.00e-34	139.00
IUUC-Gac-042099	Gasterosteus aculeatus	87.08	0.00e+00	1136.00
IUUC-Ggo-045406	Gorilla gorilla	61.85	0.00e+00	715.00
IUUC-Hsa-046341	Homo sapiens	61.85	0.00e+00	715.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	60.53	0.00e+00	706.00
IUUC-Loc-052671	Lepisosteus oculatus	75.40	0.00e+00	1119.00
IUUC-Lma-053183	Leptosphaeria maculans	28.07	1.00e-38	155.00
IUUC-Laf-054531	Loxodonta africana	60.25	0.00e+00	653.00
IUUC-Mcc-055737	Macaca mulatta	59.16	0.00e+00	712.00
IUUC-Meu-056845	Macropus eugenii	61.67	0.00e+00	734.00
IUUC-Mor-057148	Magnaporthe oryzae	25.48	4.00e-30	126.00
IUUC-Mpo-057337	Magnaporthe poae	26.79	1.00e-29	125.00
IUUC-Mmr-061153	Microcebus murinus	62.24	0.00e+00	747.00
IUUC-Mdo-062739	Monodelphis domestica	58.24	0.00e+00	683.00
IUUC-Mmu-063564	Mus musculus	60.84	0.00e+00	715.00
IUUC-Mpu-065794	Mustela putorius furo	60.26	0.00e+00	674.00
IUUC-Nle-069587	Nomascus leucogenys	54.97	8.00e-175	607.00
IUUC-Opr-071219	Ochotona princeps	47.03	4.00e-136	478.00
IUUC-Ont-071528	Oreochromis niloticus	80.78	0.00e+00	1149.00
IUUC-Ocu-073953	Oryctolagus cuniculus	58.32	1.00e-175	609.00
IUUC-Ola-086888	Oryzias latipes	75.76	0.00e+00	1049.00
IUUC-Oga-088280	Otolemur garnettii	61.26	0.00e+00	728.00
IUUC-Oar-090381	Ovis aries	56.02	0.00e+00	647.00
IUUC-Ptr-090704	Pan troglodytes	58.98	0.00e+00	663.00
IUUC-Pan-092058	Papio anubis	62.38	0.00e+00	741.00
IUUC-Pno-094905	Phaeosphaeria nodorum	29.40	3.00e-35	143.00
IUUC-Pfo-096556	Poecilia formosa	84.53	0.00e+00	1170.00
IUUC-Pab-098573	Pongo abelii	61.09	0.00e+00	697.00
IUUC-Pca-100746	Procavia capensis	58.53	0.00e+00	629.00
IUUC-Pva-102823	Pteropus vampyrus	60.21	0.00e+00	702.00
IUUC-Pte-104374	Pyrenophora teres	28.43	8.00e-34	139.00
IUUC-Pyt-104568	Pyrenophora triticirepentis	27.94	2.00e-37	151.00
IUUC-Rno-105418	Rattus norvegicus	60.56	0.00e+00	711.00
IUUC-Ssl-108495	Sclerotinia sclerotiorum	26.77	8.00e-35	142.00
IUUC-Sre-115115	Sporisorium reilianum	37.73	6.00e-64	239.00
IUUC-Ssc-116050	Sus scrofa	57.79	1.00e-157	550.00
IUUC-Tru-117971	Takifugu rubripes	85.26	0.00e+00	1177.00
IUUC-Tni-120522	Tetraodon nigroviridis	85.46	0.00e+00	1182.00
IUUC-Tvi-122312	Trichoderma virens	27.39	1.00e-35	145.00
IUUC-Tme-126990	Tuber melanosporum	27.91	3.00e-36	147.00
IUUC-Tbe-128127	Tupaia belangeri	67.95	5.00e-133	468.00
IUUC-Ttr-128911	Tursiops truncatus	64.41	3.00e-146	512.00
IUUC-Vda-129673	Verticillium dahliae	25.62	4.00e-30	126.00
IUUC-Xma-133097	Xiphophorus maculatus	84.53	0.00e+00	1150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence