iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s08470	POPTR_0015s08470.2	POPTR_0015s08470.2
POPTR_0015s08470	POPTR_0015s08470.3	POPTR_0015s08470.3
POPTR_0015s08470	POPTR_0015s08470.1	POPTR_0015s08470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	3.60e-34	118.6	14	141

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 11   kdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspalsves 100
           k  ++ + +++ ++  l++++v++ Gp+++ Yeggv+k+++e+p+ YP+k+P++ f++kifhPnv+e  G+vCl++++  + Wsp+ ++ +
   Q: 14   KLMMSDYNVETIND-GLNDFNVEFHGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVNKIFHPNVDELsGSVCLDVIN--QSWSPMFDLLN 101
           44556777888888.7***************************************************99********9..*********** PP
   S: 101  vl.lsiqsllaepnpesplneeaaellkknreeykkkvre 139
           v+ + + +ll  pnp++pln +aa+l+ k++e+y++kv+e
   Q: 102  VFeVFLPQLLIYPNPSDPLNGDAASLMMKDKEQYDQKVKE 141
           **889********************************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPSKRREM DVMKLMMSDY NVETINDGLN DFNVEFHGPK ESLYEGGVWK IHVELPDAYP 60
YKSPSIGFVN KIFHPNVDEL SGSVCLDVIN QSWSPMFDLL NVFEVFLPQL LIYPNPSDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCATTCAA TTCACCCCTA CACTCTCTCC TTATATATCT CTCTTGCCTA CCCCTGCCTT 60
GCCTCTCTCA CTTTTTGCTG CTGCTATCTT CTCTTCTCTA CGATTTTTCT GTTTGGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0015s08470g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001260	Ailuropoda melanoleuca	64.39	4.00e-48	183.00
IUUC-Atr-002471	Amborella trichopoda	87.92	6.00e-79	285.00
IUUC-Apl-003547	Anas platyrhynchos	68.87	3.00e-44	169.00
IUUC-Aca-005224	Anolis carolinensis	68.87	9.00e-44	169.00
IUUC-Ame-010807	Astyanax mexicanus	58.49	4.00e-34	135.00
IUUC-Bta-012802	Bos taurus	64.39	4.00e-48	183.00
IUUC-Cel-018412	Caenorhabditis elegans	54.05	9.00e-50	189.00
IUUC-Cja-019571	Callithrix jacchus	47.22	3.00e-34	137.00
IUUC-Cfa-020811	Canis familiaris	64.39	4.00e-48	183.00
IUUC-Cpo-021889	Cavia porcellus	68.87	3.00e-44	170.00
IUUC-Csa-023289	Chlorocebus sabaeus	64.39	4.00e-48	183.00
IUUC-Cho-024517	Choloepus hoffmanni	42.42	8.00e-23	99.40
IUUC-Cin-025571	Ciona intestinalis	45.16	4.00e-30	123.00
IUUC-Dre-027450	Danio rerio	63.24	3.00e-48	183.00
IUUC-Dno-029838	Dasypus novemcinctus	64.39	4.00e-48	183.00
IUUC-Dor-031119	Dipodomys ordii	64.39	4.00e-48	183.00
IUUC-Dme-031807	Drosophila melanogaster	60.65	7.00e-53	199.00
IUUC-Ete-032437	Echinops telfairi	62.00	2.00e-33	134.00
IUUC-Eca-034123	Equus caballus	65.29	7.00e-46	175.00
IUUC-Fca-035502	Felis catus	64.39	4.00e-48	183.00
IUUC-Fal-037054	Ficedula albicollis	68.87	4.00e-44	170.00
IUUC-Fox-037912	Fusarium oxysporum	63.77	1.00e-46	177.00
IUUC-Fso-038148	Fusarium solani	56.22	1.00e-55	208.00
IUUC-Gmo-038858	Gadus morhua	60.65	2.00e-53	200.00
IUUC-Ggr-039749	Gaeumannomyces graminis	62.66	3.00e-57	213.00
IUUC-Gga-040942	Gallus gallus	64.39	4.00e-48	183.00
IUUC-Gac-042079	Gasterosteus aculeatus	61.94	1.00e-55	207.00
IUUC-Gma-043019	Glycine max	94.23	3.00e-85	306.00
IUUC-Hsa-046545	Homo sapiens	64.39	4.00e-48	183.00
IUUC-Itr-048474	Ictidomys tridecemlineatus	64.39	4.00e-48	183.00
IUUC-Lch-050589	Latimeria chalumnae	62.50	7.00e-45	172.00
IUUC-Loc-052829	Lepisosteus oculatus	64.39	9.00e-48	182.00
IUUC-Laf-053526	Loxodonta africana	65.15	8.00e-48	182.00
IUUC-Mcc-055611	Macaca mulatta	64.39	4.00e-48	183.00
IUUC-Mor-057278	Magnaporthe oryzae	63.29	5.00e-58	216.00
IUUC-Mpo-057484	Magnaporthe poae	64.79	1.00e-54	204.00
IUUC-Mtr-058797	Medicago truncatula	82.70	2.00e-85	307.00
IUUC-Mga-059801	Meleagris gallopavo	64.39	4.00e-48	183.00
IUUC-Mmr-061205	Microcebus murinus	64.39	4.00e-48	183.00
IUUC-Mdo-062038	Monodelphis domestica	70.49	9.00e-25	104.00
IUUC-Mmu-063974	Mus musculus	64.39	4.00e-48	183.00
IUUC-Mac-065158	Musa acuminata	85.53	1.00e-79	288.00
IUUC-Mpu-066759	Mustela putorius furo	64.39	4.00e-48	183.00
IUUC-Mlu-067674	Myotis lucifugus	60.61	2.00e-44	171.00
IUUC-Nle-069926	Nomascus leucogenys	64.39	4.00e-48	183.00
IUUC-Opr-070598	Ochotona princeps	64.39	4.00e-48	183.00
IUUC-Ont-071893	Oreochromis niloticus	61.29	3.00e-54	203.00
IUUC-Oan-073273	Ornithorhynchus anatinus	68.87	2.00e-44	170.00
IUUC-Ocu-074357	Oryctolagus cuniculus	64.39	1.00e-47	181.00
IUUC-Ola-087423	Oryzias latipes	61.29	2.00e-54	204.00
IUUC-Oga-088412	Otolemur garnettii	64.39	4.00e-48	183.00
IUUC-Oar-090282	Ovis aries	68.87	4.00e-44	170.00
IUUC-Ptr-090470	Pan troglodytes	64.39	4.00e-48	183.00
IUUC-Pan-092552	Papio anubis	64.39	4.00e-48	183.00
IUUC-Psi-093516	Pelodiscus sinensis	63.56	7.00e-45	172.00
IUUC-Pno-094800	Phaeosphaeria nodorum	54.75	2.00e-51	194.00
IUUC-Pfo-097374	Poecilia formosa	64.39	3.00e-48	183.00
IUUC-Pab-098112	Pongo abelii	64.39	4.00e-48	183.00
IUUC-Pca-100436	Procavia capensis	50.35	1.00e-35	140.00
IUUC-Ppe-101144	Prunus persica	85.48	1.00e-87	314.00
IUUC-Pva-102776	Pteropus vampyrus	64.39	4.00e-48	183.00
IUUC-Rno-105699	Rattus norvegicus	63.64	1.00e-47	181.00
IUUC-Sha-106524	Sarcophilus harrisii	68.87	4.00e-44	170.00
IUUC-Sja-107813	Schizosaccharomyces japonicus	68.87	2.00e-62	230.00
IUUC-Ssl-108543	Sclerotinia sclerotiorum	58.33	2.00e-56	211.00
IUUC-Sly-111324	Solanum lycopersicum	82.80	1.00e-86	311.00
IUUC-Stu-112891	Solanum tuberosum	83.05	8.00e-82	295.00
IUUC-Sar-113572	Sorex araneus	47.17	6.00e-23	99.40
IUUC-Ssc-116221	Sus scrofa	64.46	7.00e-44	169.00
IUUC-Tgu-116965	Taeniopygia guttata	68.87	3.00e-44	169.00
IUUC-Tru-118743	Takifugu rubripes	63.23	9.00e-56	208.00
IUUC-Tni-120422	Tetraodon nigroviridis	62.50	2.00e-47	180.00
IUUC-Tca-121140	Theobroma cacao	85.48	7.00e-87	311.00
IUUC-Tvi-122592	Trichoderma virens	72.50	3.00e-54	203.00
IUUC-Tme-127020	Tuber melanosporum	62.41	4.00e-46	176.00
IUUC-Tbe-128053	Tupaia belangeri	50.94	1.00e-27	115.00
IUUC-Ttr-128734	Tursiops truncatus	64.39	4.00e-48	183.00
IUUC-Vpa-130729	Vicugna pacos	68.87	3.00e-44	169.00
IUUC-Vvi-131055	Vitis vinifera	86.56	1.00e-87	314.00
IUUC-Xtr-132368	Xenopus tropicalis	64.39	4.00e-48	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence