iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039748

Ensembl Protein ID

GGTG_14016T0

UniProt Accession

J3PKG2; J3PKG2_GAGT3

Genbank Protein ID

EJT68407.1

Protein Name

DOM34-interacting protein 2

Genbank Nucleotide ID

ADBI01001369

Gene Name

GGTG_14016

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_14016	GGTG_14016T0	GGTG_14016T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-55	180.0	108	140
UBD/Beta-Prp	2.40e-87	292.4	570	727

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH + +t laf  s+t+l+sGs D  + vWDl 
   Q: 108  GHRSAITTLAFdkSGTRLASGSKDTDVIVWDLV 140
           8**********9777*********99*****85 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..... 104
           i ++ +spd+++la++  d+t+kv+ +++ kl   l+gh+ +v ++++s d+k++vt+s D+++k+w l+ g+c  +l gh+ds+l ++f p     
   Q: 570  ILSLRYSPDSRMLAVALLDSTVKVFFTDSLKLYLNLYGHKLPVLSMDISYDSKLIVTSSADKNVKIWGLDFGDCHKSLFGHQDSILQVAFVPhnsdg 666
           445899***************************************************************************************9999 PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           +g+++ s+s+dr i+ wd ++ + ++  l+gh+g v+ ++v+ +g+ +vs+s D+ +r+W  
   Q: 667  NGHHFFSTSKDRSIKYWDGDKFEQVQ-RLDGHHGEVWALAVSRSGRFIVSASHDKSIRVWEE 727
           99************************.*********************************64 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MVKSYLKFEH SKSFGLVSSS TSNIVWFSKE AKGTGAGQVV TAANEEVLCW DVKKGELLSR 60
WRDEKCKAQV TALAQSKTDP DVFAVGHEDG SIRLWDSKIS TIIVSFNGHR SAITTLAFDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA GTTCCTGATG CGCGGCGCAT CGCGGCGTCG CGAGAAGCTG AGTCGACTTC 60
CCAGGACAGT GCAGCCAATA TTGTGCGCGT GAAGCAGCAA AAATGGTGAA ATCATACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	34.93	8.00e-129	453.00
IUUC-Aml-001245	Ailuropoda melanoleuca	37.36	5.00e-165	573.00
IUUC-Atr-002700	Amborella trichopoda	35.43	4.00e-144	504.00
IUUC-Apl-004164	Anas platyrhynchos	38.16	2.00e-129	454.00
IUUC-Aca-004765	Anolis carolinensis	36.62	1.00e-162	565.00
IUUC-Aly-006503	Arabidopsis lyrata	36.10	1.00e-151	528.00
IUUC-Ath-006848	Arabidopsis thaliana	34.25	4.00e-151	527.00
IUUC-Ago-007909	Ashbya gossypii	42.97	0.00e+00	750.00
IUUC-Acl-008238	Aspergillus clavatus	62.90	0.00e+00	1247.00
IUUC-Afl-008544	Aspergillus flavus	61.73	0.00e+00	1214.00
IUUC-Afu-008868	Aspergillus fumigatus	62.77	0.00e+00	1236.00
IUUC-Ani-009367	Aspergillus nidulans	61.27	0.00e+00	1181.00
IUUC-Ang-009732	Aspergillus niger	61.60	0.00e+00	1229.00
IUUC-Aor-010140	Aspergillus oryzae	62.11	0.00e+00	1224.00
IUUC-Ate-010572	Aspergillus terreus	60.76	0.00e+00	1184.00
IUUC-Ame-010956	Astyanax mexicanus	36.51	5.00e-166	576.00
IUUC-Bgr-012296	Blumeria graminis	61.48	0.00e+00	1200.00
IUUC-Bta-012716	Bos taurus	37.69	2.00e-167	581.00
IUUC-Bci-013699	Botrytis cinerea	68.04	0.00e+00	1269.00
IUUC-Bdi-014525	Brachypodium distachyon	35.55	1.00e-146	512.00
IUUC-Bol-015117	Brassica oleracea	36.22	8.00e-154	536.00
IUUC-Bra-016869	Brassica rapa	43.10	3.00e-115	407.00
IUUC-Cel-018570	Caenorhabditis elegans	28.32	3.00e-95	341.00
IUUC-Cja-019425	Callithrix jacchus	37.03	4.00e-170	590.00
IUUC-Cfa-020787	Canis familiaris	37.68	5.00e-158	550.00
IUUC-Cpo-021729	Cavia porcellus	39.97	4.00e-136	477.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	41.30	4.00e-95	341.00
IUUC-Csa-024098	Chlorocebus sabaeus	37.36	6.00e-172	596.00
IUUC-Cho-024495	Choloepus hoffmanni	40.08	3.00e-96	344.00
IUUC-Cin-025245	Ciona intestinalis	34.48	8.00e-96	342.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	73.81	0.00e+00	1386.00
IUUC-Cne-026835	Cryptococcus neoformans	42.30	0.00e+00	652.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.90	2.00e-50	192.00
IUUC-Dre-027874	Danio rerio	37.53	8.00e-175	605.00
IUUC-Dno-028905	Dasypus novemcinctus	37.73	1.00e-167	582.00
IUUC-Dor-030383	Dipodomys ordii	33.40	3.00e-62	231.00
IUUC-Dse-031297	Dothistroma septosporum	51.70	0.00e+00	1005.00
IUUC-Dme-031956	Drosophila melanogaster	32.49	6.00e-131	460.00
IUUC-Ete-032608	Echinops telfairi	34.49	2.00e-92	331.00
IUUC-Eca-034181	Equus caballus	37.55	1.00e-164	572.00
IUUC-Eeu-034495	Erinaceus europaeus	38.22	3.00e-162	564.00
IUUC-Fca-035994	Felis catus	39.01	2.00e-165	574.00
IUUC-Fal-036611	Ficedula albicollis	35.77	2.00e-162	564.00
IUUC-Fox-037807	Fusarium oxysporum	73.61	0.00e+00	1409.00
IUUC-Fso-038090	Fusarium solani	74.64	0.00e+00	1418.00
IUUC-Gmo-039018	Gadus morhua	33.94	8.00e-87	313.00
IUUC-Gga-040707	Gallus gallus	42.31	4.00e-127	447.00
IUUC-Gac-042334	Gasterosteus aculeatus	32.47	5.00e-74	270.00
IUUC-Gma-043033	Glycine max	35.27	8.00e-151	526.00
IUUC-Ggo-045334	Gorilla gorilla	37.44	2.00e-168	584.00
IUUC-Hsa-046996	Homo sapiens	37.44	6.00e-168	583.00
IUUC-Hvu-047381	Hordeum vulgare	32.52	4.00e-78	284.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	37.58	4.00e-165	573.00
IUUC-Kpa-049185	Komagataella pastoris	40.06	0.00e+00	698.00
IUUC-Lch-050098	Latimeria chalumnae	35.28	8.00e-150	523.00
IUUC-Lpe-050710	Leersia perrieri	34.51	3.00e-139	488.00
IUUC-Loc-052745	Lepisosteus oculatus	37.76	1.00e-164	572.00
IUUC-Lma-053104	Leptosphaeria maculans	58.32	0.00e+00	1128.00
IUUC-Laf-054395	Loxodonta africana	37.42	5.00e-167	580.00
IUUC-Mcc-055077	Macaca mulatta	37.54	2.00e-169	588.00
IUUC-Meu-056418	Macropus eugenii	42.33	4.00e-90	324.00
IUUC-Mor-057031	Magnaporthe oryzae	82.77	0.00e+00	1456.00
IUUC-Mpo-057420	Magnaporthe poae	94.83	0.00e+00	1763.00
IUUC-Mtr-057838	Medicago truncatula	35.68	6.00e-156	543.00
IUUC-Mla-058854	Melampsora laricipopulina	42.29	0.00e+00	655.00
IUUC-Mga-060120	Meleagris gallopavo	39.65	5.00e-128	450.00
IUUC-Mvi-060407	Microbotryum violaceum	44.28	0.00e+00	779.00
IUUC-Mmr-060635	Microcebus murinus	37.67	1.00e-165	575.00
IUUC-Mdo-063023	Monodelphis domestica	36.87	1.00e-165	575.00
IUUC-Mmu-064103	Mus musculus	38.04	2.00e-171	594.00
IUUC-Mac-065569	Musa acuminata	36.46	2.00e-149	521.00
IUUC-Mpu-066462	Mustela putorius furo	37.30	3.00e-166	577.00
IUUC-Mlu-067894	Myotis lucifugus	37.64	1.00e-167	582.00
IUUC-Nfi-068321	Neosartorya fischeri	62.87	0.00e+00	1223.00
IUUC-Ncr-068661	Neurospora crassa	75.62	0.00e+00	1430.00
IUUC-Nle-069409	Nomascus leucogenys	36.84	4.00e-163	566.00
IUUC-Opr-070445	Ochotona princeps	41.98	4.00e-123	434.00
IUUC-Ont-072339	Oreochromis niloticus	37.63	2.00e-169	588.00
IUUC-Oan-073688	Ornithorhynchus anatinus	36.93	1.00e-153	535.00
IUUC-Ocu-074227	Oryctolagus cuniculus	37.37	6.00e-166	576.00
IUUC-Oba-075635	Oryza barthii	35.43	8.00e-136	476.00
IUUC-Obr-076897	Oryza brachyantha	36.59	1.00e-145	508.00
IUUC-Ogl-077555	Oryza glaberrima	35.33	2.00e-135	474.00
IUUC-Ogu-078724	Oryza glumaepatula	35.54	3.00e-138	484.00
IUUC-Oin-080030	Oryza indica	35.74	3.00e-136	477.00
IUUC-Olo-080687	Oryza longistaminata	33.57	2.00e-125	442.00
IUUC-Ome-081867	Oryza meridionalis	35.64	2.00e-137	482.00
IUUC-Oni-082559	Oryza nivara	35.74	4.00e-136	477.00
IUUC-Opu-083332	Oryza punctata	39.78	3.00e-130	457.00
IUUC-Oru-084455	Oryza rufipogon	35.64	8.00e-136	476.00
IUUC-Osa-085793	Oryza sativa	35.64	8.00e-136	476.00
IUUC-Ola-087395	Oryzias latipes	37.54	2.00e-157	548.00
IUUC-Olu-087768	Ostreococcus lucimarinus	40.97	5.00e-111	394.00
IUUC-Oga-088574	Otolemur garnettii	37.82	1.00e-166	578.00
IUUC-Oar-089453	Ovis aries	37.51	5.00e-167	580.00
IUUC-Ptr-090694	Pan troglodytes	37.44	1.00e-167	582.00
IUUC-Pan-092420	Papio anubis	37.33	1.00e-169	588.00
IUUC-Psi-093683	Pelodiscus sinensis	37.24	1.00e-160	558.00
IUUC-Pma-094197	Petromyzon marinus	34.90	7.00e-31	125.00
IUUC-Pno-094783	Phaeosphaeria nodorum	57.55	0.00e+00	1122.00
IUUC-Ppa-095208	Physcomitrella patens	35.96	2.00e-148	518.00
IUUC-Pfo-096299	Poecilia formosa	36.72	2.00e-172	597.00
IUUC-Pab-098706	Pongo abelii	36.95	6.00e-162	563.00
IUUC-Pop-099275	Populus trichocarpa	35.61	5.00e-150	523.00
IUUC-Pca-100796	Procavia capensis	32.39	2.00e-102	365.00
IUUC-Ppe-101861	Prunus persica	35.99	8.00e-145	506.00
IUUC-Pva-103241	Pteropus vampyrus	34.91	1.00e-149	522.00
IUUC-Pgr-103432	Puccinia graminis	39.07	0.00e+00	639.00
IUUC-Ptt-103742	Puccinia triticina	37.37	2.00e-167	581.00
IUUC-Pte-104069	Pyrenophora teres	58.35	0.00e+00	1089.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	58.35	0.00e+00	1117.00
IUUC-Rno-105219	Rattus norvegicus	37.93	6.00e-168	583.00
IUUC-Sce-106271	Saccharomyces cerevisiae	42.80	0.00e+00	749.00
IUUC-Sha-107550	Sarcophilus harrisii	36.58	1.00e-163	568.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	44.79	0.00e+00	765.00
IUUC-Spo-108239	Schizosaccharomyces pombe	46.41	0.00e+00	805.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	69.55	0.00e+00	1337.00
IUUC-Smo-109477	Selaginella moellendorffii	37.18	7.00e-154	536.00
IUUC-Sit-110000	Setaria italica	36.43	3.00e-135	474.00
IUUC-Sly-111595	Solanum lycopersicum	36.68	5.00e-151	526.00
IUUC-Stu-112516	Solanum tuberosum	36.10	7.00e-148	516.00
IUUC-Sar-113195	Sorex araneus	41.70	3.00e-114	404.00
IUUC-Sbi-114465	Sorghum bicolor	34.95	1.00e-144	505.00
IUUC-Sre-115006	Sporisorium reilianum	39.48	0.00e+00	667.00
IUUC-Ssc-115929	Sus scrofa	37.36	2.00e-164	571.00
IUUC-Tgu-117282	Taeniopygia guttata	36.21	7.00e-161	559.00
IUUC-Tru-118406	Takifugu rubripes	37.14	2.00e-167	581.00
IUUC-Tsy-119170	Tarsius syrichta	36.98	6.00e-163	566.00
IUUC-Tni-119721	Tetraodon nigroviridis	36.45	3.00e-159	554.00
IUUC-Tca-121761	Theobroma cacao	36.03	2.00e-153	534.00
IUUC-Tre-121908	Trichoderma reesei	72.80	0.00e+00	1358.00
IUUC-Tvi-122547	Trichoderma virens	72.52	0.00e+00	1368.00
IUUC-Tae-125496	Triticum aestivum	35.33	5.00e-140	490.00
IUUC-Tur-126811	Triticum urartu	36.29	6.00e-139	486.00
IUUC-Tme-126987	Tuber melanosporum	58.87	0.00e+00	1118.00
IUUC-Tbe-127315	Tupaia belangeri	44.10	4.00e-106	377.00
IUUC-Ttr-129165	Tursiops truncatus	31.10	6.00e-112	397.00
IUUC-Uma-129651	Ustilago maydis	39.83	0.00e+00	679.00
IUUC-Vda-129973	Verticillium dahliae	74.19	0.00e+00	1377.00
IUUC-Vpa-130163	Vicugna pacos	31.63	1.00e-55	209.00
IUUC-Vvi-131402	Vitis vinifera	36.43	3.00e-152	531.00
IUUC-Xtr-132296	Xenopus tropicalis	39.29	1.00e-170	592.00
IUUC-Xma-133028	Xiphophorus maculatus	36.79	4.00e-173	600.00
IUUC-Yli-134484	Yarrowia lipolytica	46.17	0.00e+00	781.00
IUUC-Zma-135938	Zea mays	34.47	2.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence