iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002370

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01066599

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000013993.1	ENSAMET00000015382.1	ENSAMEP00000014773.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-39	130.0	53	88
UBD/Beta-Prp	4.60e-52	177.1	47	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++++++++ +d +llvs+s Dg++ vWD+ t +
   Q: 53   GHLAKIYAMHWaTDsKLLVSASQDGKLIVWDTYTTN 88
           899*********888****************87765 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee. 131
           + r+l gh a+++a+ +  d+k+lv++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l++++   + 
   Q: 47   TRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKv 135
           5689****************************************************************************999877777 PP
   S: 132  ..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
              ls h+g  +c ++ + +n +v++s D+t+ lWd++tg+  + + g ht++  sl+++++ k ++sg++d + klwd+++g+c +t+
   Q: 136  srELSAHTGYLSCCRFLD-DNNIVTSSGDTTCALWDIETGQQKTVFVG-HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTF 222
           78***************9.566899**********************9.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
           +gh++ ++ + f+pn+e + +gs+D s r++dlr ++ l+++++
   Q: 223  TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSH 266
           *************************************9998876 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKKQIAD ARKACADITL AELVSGLEVV GRVQMRTRRT LRGHLAKIYA 60
MHWATDSKLL VSASQDGKLI VWDTYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGAGA TGGAGCAGCT GCGGCAGGAG GCAGAGCAGC TCAAGAAGCA GATTGCAGTA 60
ACCCCAGAAC TTTCCCACTG GGGGACCCCA GAAAACATGC AACCCGGGAA GGGAGGAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

KEGG

aml:100475485

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	49.26	6.00e-75	274.00
IUUC-Atr-002610	Amborella trichopoda	49.03	2.00e-86	312.00
IUUC-Apl-004079	Anas platyrhynchos	92.94	0.00e+00	672.00
IUUC-Aca-004539	Anolis carolinensis	89.41	0.00e+00	649.00
IUUC-Aly-006025	Arabidopsis lyrata	50.32	4.00e-84	304.00
IUUC-Ath-006617	Arabidopsis thaliana	50.32	9.00e-84	303.00
IUUC-Bta-012810	Bos taurus	98.24	0.00e+00	695.00
IUUC-Bdi-014785	Brachypodium distachyon	49.04	6.00e-86	310.00
IUUC-Bol-015759	Brassica oleracea	51.28	4.00e-82	300.00
IUUC-Bra-016695	Brassica rapa	51.13	7.00e-82	297.00
IUUC-Cja-019894	Callithrix jacchus	97.94	0.00e+00	689.00
IUUC-Cfa-020140	Canis familiaris	98.82	0.00e+00	693.00
IUUC-Cpo-021908	Cavia porcellus	98.24	0.00e+00	696.00
IUUC-Csa-023321	Chlorocebus sabaeus	97.06	0.00e+00	686.00
IUUC-Dno-029783	Dasypus novemcinctus	96.14	0.00e+00	627.00
IUUC-Ete-032435	Echinops telfairi	91.18	5.00e-180	623.00
IUUC-Eca-034169	Equus caballus	98.82	0.00e+00	697.00
IUUC-Eeu-034631	Erinaceus europaeus	91.56	9.00e-166	575.00
IUUC-Fca-035392	Felis catus	98.82	0.00e+00	697.00
IUUC-Fal-036902	Ficedula albicollis	91.76	0.00e+00	665.00
IUUC-Gga-040655	Gallus gallus	91.50	0.00e+00	655.00
IUUC-Ggo-045346	Gorilla gorilla	97.06	0.00e+00	686.00
IUUC-Hsa-046203	Homo sapiens	97.06	0.00e+00	686.00
IUUC-Hvu-047596	Hordeum vulgare	49.04	8.00e-85	306.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	97.35	0.00e+00	691.00
IUUC-Lpe-051040	Leersia perrieri	48.72	1.00e-86	313.00
IUUC-Loc-052327	Lepisosteus oculatus	86.18	0.00e+00	633.00
IUUC-Laf-053616	Loxodonta africana	97.94	0.00e+00	694.00
IUUC-Mcc-055798	Macaca mulatta	97.06	0.00e+00	686.00
IUUC-Mga-059516	Meleagris gallopavo	92.94	0.00e+00	671.00
IUUC-Mmr-061701	Microcebus murinus	98.82	0.00e+00	696.00
IUUC-Mdo-061879	Monodelphis domestica	94.12	0.00e+00	671.00
IUUC-Mmu-063132	Mus musculus	98.24	0.00e+00	694.00
IUUC-Mac-064871	Musa acuminata	48.40	1.00e-83	303.00
IUUC-Mpu-066365	Mustela putorius furo	98.82	0.00e+00	699.00
IUUC-Mlu-067628	Myotis lucifugus	97.06	0.00e+00	686.00
IUUC-Nle-069015	Nomascus leucogenys	95.59	0.00e+00	670.00
IUUC-Opr-070261	Ochotona princeps	99.12	0.00e+00	699.00
IUUC-Ocu-074255	Oryctolagus cuniculus	99.41	0.00e+00	701.00
IUUC-Oba-075818	Oryza barthii	47.08	1.00e-83	303.00
IUUC-Obr-076229	Oryza brachyantha	48.40	1.00e-83	303.00
IUUC-Ogl-077730	Oryza glaberrima	49.04	6.00e-87	314.00
IUUC-Ogu-078583	Oryza glumaepatula	48.46	2.00e-68	252.00
IUUC-Oin-079661	Oryza indica	48.40	1.00e-83	303.00
IUUC-Olo-080225	Oryza longistaminata	48.46	2.00e-68	252.00
IUUC-Oni-082161	Oryza nivara	48.72	1.00e-86	312.00
IUUC-Opu-084072	Oryza punctata	49.04	6.00e-87	314.00
IUUC-Oru-084316	Oryza rufipogon	48.40	1.00e-83	303.00
IUUC-Osa-085380	Oryza sativa	48.40	1.00e-83	303.00
IUUC-Oga-088685	Otolemur garnettii	99.12	0.00e+00	700.00
IUUC-Oar-089373	Ovis aries	95.01	0.00e+00	659.00
IUUC-Ptr-090627	Pan troglodytes	94.41	0.00e+00	665.00
IUUC-Pan-092347	Papio anubis	97.05	0.00e+00	684.00
IUUC-Psi-092965	Pelodiscus sinensis	92.94	0.00e+00	671.00
IUUC-Ppa-095726	Physcomitrella patens	44.78	8.00e-75	273.00
IUUC-Pab-098335	Pongo abelii	96.47	0.00e+00	683.00
IUUC-Pop-099370	Populus trichocarpa	49.03	1.00e-86	313.00
IUUC-Ppe-102016	Prunus persica	47.42	4.00e-84	304.00
IUUC-Pva-102666	Pteropus vampyrus	99.12	0.00e+00	697.00
IUUC-Rno-105834	Rattus norvegicus	98.24	0.00e+00	660.00
IUUC-Sha-107128	Sarcophilus harrisii	94.71	0.00e+00	670.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	66.57	8.00e-131	459.00
IUUC-Smo-109652	Selaginella moellendorffii	44.26	2.00e-74	272.00
IUUC-Sit-110441	Setaria italica	48.72	2.00e-86	312.00
IUUC-Sly-111784	Solanum lycopersicum	49.35	3.00e-85	308.00
IUUC-Stu-112400	Solanum tuberosum	49.35	4.00e-85	308.00
IUUC-Sbi-114038	Sorghum bicolor	48.08	3.00e-85	308.00
IUUC-Ssc-115886	Sus scrofa	98.53	0.00e+00	695.00
IUUC-Tgu-116461	Taeniopygia guttata	92.35	0.00e+00	668.00
IUUC-Tca-121224	Theobroma cacao	49.35	6.00e-87	314.00
IUUC-Tae-124407	Triticum aestivum	49.36	3.00e-85	308.00
IUUC-Tur-126755	Triticum urartu	49.52	5.00e-86	313.00
IUUC-Tbe-127694	Tupaia belangeri	81.47	4.00e-149	520.00
IUUC-Vvi-131162	Vitis vinifera	49.35	2.00e-86	312.00
IUUC-Xtr-132928	Xenopus tropicalis	87.65	4.00e-178	616.00
IUUC-Yli-134396	Yarrowia lipolytica	31.93	6.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence