iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118361

UUCD1 version

UUC-TaR-00077

Ensembl Protein ID

ENSTRUP00000003426.1

UniProt Accession

H2RTF9; H2RTF9_TAKRU

Protein Name

Uncharacterized protein

Gene Name

nle1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000001487.1	ENSTRUT00000003445.1	ENSTRUP00000003426.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-68	222.3	205	248
UBD/Beta-Prp	1.50e-82	278.4	114	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt ++tcl++      ++ ++l+s+s Dg+i+vWD+  g+++k
   Q: 205  GHTKWITCLCWeplhlnPEcRYLASSSKDGSIRVWDTVLGRCEK 248
           8***************9889****************99998876 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleet 132
           + +sl+gh+++v ++ fsp+gk+l++gs D t++ wdl t +++ht +gh++ vls+++sp+g+kl+sG + + i +wd  tg+ + +t
   Q: 114  CTSSLQGHTEAVISTAFSPTGKYLASGSGDTTVRFWDLTTETPLHTARGHTHWVLSIAWSPDGKKLASGCKNSQICLWDPATGTQVGKT 202
           4899************************************************************************************* PP
   S: 133  lsghdgvvncvvv.....hpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvr 216
           l+gh+++++c+++     +p++++l+s+s+D+ +r+Wd   g++ + ltg ht+sv+++++  +g  l + s+d+tvk+w  + g + r
   Q: 203  LTGHTKWITCLCWeplhlNPECRYLASSSKDGSIRVWDTVLGRCEKILTG-HTQSVTCVKWGGDG-LLYTSSQDRTVKVWRAKDGVMCR 289
           **********9762222267899**************************9.************98.9********************** PP
   S: 217  tlnghtdnvksvrfspnde 235
           tl+gh  +v+ +++s  ++
   Q: 290  TLQGHAHWVNTLALS--TD 306
           ************999..33 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

LPPCTMFNNG VDLSVMMTED VERLLIQFQN ENGETLGSPF DVPLDITTDK LQLVCNALLQ 60
NEESLPLAFF VHGEAEVVTS LASCVKDLKI ETEQILPVMY QPLAVFRVRA VARCTSSLQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGTGGGGAT TTTTAACGCA TCGCTACTTT GAAAAACGGT AACATTTTAG ACAGTTATTT 60
ACCACCTTGT ACCATGTTTA ATAATGGTTA GTGTTGTACG TACGCTAGTT TATGCTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0007219--P:Notch signaling pathway
GO:0000027--P:ribosomal large subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	57.82	5.00e-164	570.00
IUUC-Aml-001793	Ailuropoda melanoleuca	77.64	0.00e+00	798.00
IUUC-Atr-002507	Amborella trichopoda	56.79	9.00e-164	569.00
IUUC-Apl-003964	Anas platyrhynchos	81.10	0.00e+00	790.00
IUUC-Aly-006396	Arabidopsis lyrata	54.09	8.00e-158	550.00
IUUC-Ath-007278	Arabidopsis thaliana	54.38	7.00e-159	553.00
IUUC-Ago-007951	Ashbya gossypii	48.48	4.00e-130	457.00
IUUC-Acl-008298	Aspergillus clavatus	49.06	1.00e-124	439.00
IUUC-Afl-008581	Aspergillus flavus	56.11	2.00e-115	409.00
IUUC-Afu-008906	Aspergillus fumigatus	47.90	5.00e-123	434.00
IUUC-Ani-009189	Aspergillus nidulans	45.53	9.00e-123	433.00
IUUC-Ang-009630	Aspergillus niger	49.89	2.00e-129	456.00
IUUC-Aor-010038	Aspergillus oryzae	50.21	2.00e-132	466.00
IUUC-Ate-010278	Aspergillus terreus	47.29	2.00e-127	449.00
IUUC-Ame-011890	Astyanax mexicanus	87.63	0.00e+00	871.00
IUUC-Bgr-012011	Blumeria graminis	50.21	2.00e-133	469.00
IUUC-Bta-012964	Bos taurus	78.36	0.00e+00	803.00
IUUC-Bci-013592	Botrytis cinerea	46.87	3.00e-122	432.00
IUUC-Bdi-015035	Brachypodium distachyon	58.55	3.00e-166	578.00
IUUC-Bol-015501	Brassica oleracea	56.16	4.00e-157	547.00
IUUC-Bra-017642	Brassica rapa	56.52	9.00e-157	546.00
IUUC-Cel-018430	Caenorhabditis elegans	58.54	1.00e-166	578.00
IUUC-Cja-019125	Callithrix jacchus	78.74	0.00e+00	806.00
IUUC-Cfa-021013	Canis familiaris	77.19	0.00e+00	724.00
IUUC-Cpo-021743	Cavia porcellus	77.05	0.00e+00	798.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	45.13	9.00e-115	406.00
IUUC-Csa-024270	Chlorocebus sabaeus	77.99	0.00e+00	801.00
IUUC-Cin-025795	Ciona intestinalis	64.81	0.00e+00	679.00
IUUC-Csv-025953	Ciona savignyi	66.11	0.00e+00	677.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	54.38	8.00e-112	397.00
IUUC-Cne-026901	Cryptococcus neoformans	46.77	9.00e-133	466.00
IUUC-Cme-027281	Cyanidioschyzon merolae	46.36	2.00e-110	393.00
IUUC-Dre-028515	Danio rerio	85.95	0.00e+00	856.00
IUUC-Dno-029596	Dasypus novemcinctus	78.48	0.00e+00	799.00
IUUC-Dor-030494	Dipodomys ordii	76.12	0.00e+00	795.00
IUUC-Dse-031538	Dothistroma septosporum	50.52	4.00e-132	464.00
IUUC-Dme-031974	Drosophila melanogaster	58.44	4.00e-163	567.00
IUUC-Ete-032948	Echinops telfairi	84.21	1.00e-105	376.00
IUUC-Eca-033399	Equus caballus	78.60	0.00e+00	799.00
IUUC-Eeu-035013	Erinaceus europaeus	82.78	9.00e-105	374.00
IUUC-Fca-035860	Felis catus	78.32	0.00e+00	800.00
IUUC-Fal-037069	Ficedula albicollis	86.06	4.00e-132	463.00
IUUC-Fox-038059	Fusarium oxysporum	45.55	8.00e-125	440.00
IUUC-Fso-038445	Fusarium solani	47.37	2.00e-126	446.00
IUUC-Gmo-039319	Gadus morhua	85.23	0.00e+00	808.00
IUUC-Ggr-040095	Gaeumannomyces graminis	48.86	3.00e-125	441.00
IUUC-Gga-040303	Gallus gallus	84.46	1.00e-130	458.00
IUUC-Gac-042267	Gasterosteus aculeatus	89.54	0.00e+00	849.00
IUUC-Gma-043974	Glycine max	56.87	3.00e-164	571.00
IUUC-Ggo-044637	Gorilla gorilla	78.18	0.00e+00	798.00
IUUC-Hsa-046128	Homo sapiens	77.99	0.00e+00	807.00
IUUC-Hvu-047373	Hordeum vulgare	57.91	4.00e-164	570.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	78.08	0.00e+00	799.00
IUUC-Kpa-049274	Komagataella pastoris	45.29	1.00e-129	456.00
IUUC-Lch-049907	Latimeria chalumnae	79.38	0.00e+00	797.00
IUUC-Lpe-050778	Leersia perrieri	52.99	3.00e-145	508.00
IUUC-Loc-051889	Lepisosteus oculatus	82.18	0.00e+00	825.00
IUUC-Lma-053041	Leptosphaeria maculans	50.12	7.00e-123	434.00
IUUC-Laf-053598	Loxodonta africana	78.74	0.00e+00	803.00
IUUC-Mcc-055660	Macaca mulatta	78.20	0.00e+00	803.00
IUUC-Meu-056197	Macropus eugenii	70.00	0.00e+00	696.00
IUUC-Mor-056949	Magnaporthe oryzae	44.84	3.00e-119	422.00
IUUC-Mpo-057571	Magnaporthe poae	55.71	9.00e-65	240.00
IUUC-Mtr-058530	Medicago truncatula	58.60	3.00e-161	561.00
IUUC-Mla-059133	Melampsora laricipopulina	51.49	1.00e-122	432.00
IUUC-Mga-059252	Meleagris gallopavo	84.66	0.00e+00	669.00
IUUC-Mvi-060522	Microbotryum violaceum	47.56	3.00e-132	464.00
IUUC-Mmr-061117	Microcebus murinus	78.15	0.00e+00	795.00
IUUC-Mdo-062892	Monodelphis domestica	78.06	0.00e+00	801.00
IUUC-Mmu-064108	Mus musculus	79.32	0.00e+00	786.00
IUUC-Mac-064430	Musa acuminata	58.87	3.00e-166	577.00
IUUC-Mpu-065882	Mustela putorius furo	77.85	0.00e+00	796.00
IUUC-Mlu-068123	Myotis lucifugus	78.32	0.00e+00	803.00
IUUC-Nfi-068484	Neosartorya fischeri	48.74	2.00e-124	439.00
IUUC-Ncr-068649	Neurospora crassa	43.15	6.00e-117	414.00
IUUC-Nle-069140	Nomascus leucogenys	78.60	0.00e+00	803.00
IUUC-Opr-070220	Ochotona princeps	72.88	0.00e+00	699.00
IUUC-Ont-072643	Oreochromis niloticus	90.38	0.00e+00	904.00
IUUC-Ocu-074007	Oryctolagus cuniculus	78.53	0.00e+00	783.00
IUUC-Oba-075904	Oryza barthii	57.91	9.00e-166	576.00
IUUC-Obr-076280	Oryza brachyantha	57.69	2.00e-165	575.00
IUUC-Ogl-077425	Oryza glaberrima	58.12	4.00e-166	577.00
IUUC-Ogu-078586	Oryza glumaepatula	57.91	1.00e-165	576.00
IUUC-Oin-079489	Oryza indica	55.98	5.00e-157	547.00
IUUC-Olo-080766	Oryza longistaminata	57.78	2.00e-165	575.00
IUUC-Ome-081905	Oryza meridionalis	58.12	1.00e-165	576.00
IUUC-Oni-083022	Oryza nivara	58.12	2.00e-166	578.00
IUUC-Opu-083615	Oryza punctata	58.12	7.00e-166	576.00
IUUC-Oru-085076	Oryza rufipogon	58.12	2.00e-166	578.00
IUUC-Osa-085516	Oryza sativa	58.12	2.00e-166	578.00
IUUC-Ola-087290	Oryzias latipes	88.28	0.00e+00	889.00
IUUC-Olu-087898	Ostreococcus lucimarinus	52.39	7.00e-145	507.00
IUUC-Oga-088980	Otolemur garnettii	77.97	0.00e+00	797.00
IUUC-Oar-089580	Ovis aries	76.94	0.00e+00	687.00
IUUC-Ptr-090845	Pan troglodytes	78.60	0.00e+00	803.00
IUUC-Pan-092836	Papio anubis	78.20	0.00e+00	805.00
IUUC-Psi-093965	Pelodiscus sinensis	72.27	3.00e-47	179.00
IUUC-Pno-095052	Phaeosphaeria nodorum	48.75	4.00e-129	454.00
IUUC-Ppa-095432	Physcomitrella patens	57.69	2.00e-165	575.00
IUUC-Pfo-096963	Poecilia formosa	81.38	0.00e+00	786.00
IUUC-Pab-097716	Pongo abelii	75.00	0.00e+00	763.00
IUUC-Pop-099224	Populus trichocarpa	56.93	4.00e-165	574.00
IUUC-Pca-100682	Procavia capensis	79.15	8.00e-173	599.00
IUUC-Ppe-101819	Prunus persica	56.78	1.00e-161	563.00
IUUC-Pva-102338	Pteropus vampyrus	76.26	1.00e-169	588.00
IUUC-Pgr-103583	Puccinia graminis	55.42	1.00e-130	459.00
IUUC-Ptt-103737	Puccinia triticina	45.89	6.00e-97	348.00
IUUC-Pte-104150	Pyrenophora teres	50.79	9.00e-128	450.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	50.57	2.00e-127	449.00
IUUC-Rno-105987	Rattus norvegicus	79.28	0.00e+00	805.00
IUUC-Sce-106315	Saccharomyces cerevisiae	48.59	5.00e-132	464.00
IUUC-Sha-107273	Sarcophilus harrisii	77.85	0.00e+00	805.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	46.33	2.00e-122	432.00
IUUC-Spo-108092	Schizosaccharomyces pombe	49.09	2.00e-125	442.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	47.19	2.00e-122	432.00
IUUC-Smo-108855	Selaginella moellendorffii	54.67	3.00e-160	558.00
IUUC-Sit-110329	Setaria italica	57.91	4.00e-165	574.00
IUUC-Sly-111830	Solanum lycopersicum	58.55	4.00e-166	577.00
IUUC-Stu-112603	Solanum tuberosum	58.55	4.00e-166	577.00
IUUC-Sar-113504	Sorex araneus	68.31	3.00e-54	206.00
IUUC-Sbi-114560	Sorghum bicolor	58.12	3.00e-166	578.00
IUUC-Sre-115133	Sporisorium reilianum	40.85	3.00e-122	432.00
IUUC-Ssc-115903	Sus scrofa	78.74	0.00e+00	803.00
IUUC-Tgu-116798	Taeniopygia guttata	81.65	0.00e+00	829.00
IUUC-Tsy-118849	Tarsius syrichta	78.30	0.00e+00	794.00
IUUC-Tni-120094	Tetraodon nigroviridis	95.39	0.00e+00	945.00
IUUC-Tca-121634	Theobroma cacao	57.38	4.00e-162	564.00
IUUC-Tre-122051	Trichoderma reesei	46.46	2.00e-121	429.00
IUUC-Tvi-122322	Trichoderma virens	49.07	3.00e-125	442.00
IUUC-Tae-125822	Triticum aestivum	57.69	3.00e-164	571.00
IUUC-Tur-126766	Triticum urartu	51.33	2.00e-155	542.00
IUUC-Tme-127175	Tuber melanosporum	49.80	6.00e-133	467.00
IUUC-Tbe-127779	Tupaia belangeri	79.21	0.00e+00	720.00
IUUC-Ttr-128224	Tursiops truncatus	75.52	0.00e+00	692.00
IUUC-Uma-129537	Ustilago maydis	46.08	3.00e-125	442.00
IUUC-Vda-129927	Verticillium dahliae	47.49	3.00e-113	401.00
IUUC-Vpa-130658	Vicugna pacos	68.01	0.00e+00	667.00
IUUC-Vvi-131659	Vitis vinifera	57.51	7.00e-166	576.00
IUUC-Xtr-132918	Xenopus tropicalis	75.68	0.00e+00	776.00
IUUC-Xma-133700	Xiphophorus maculatus	90.79	0.00e+00	906.00
IUUC-Yli-134478	Yarrowia lipolytica	50.81	2.00e-142	499.00
IUUC-Zma-135835	Zea mays	55.26	3.00e-161	561.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence