iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-130027

Ensembl Protein ID

EGY23145

UniProt Accession

G2X3J6; G2X3J6_VERDV

Genbank Protein ID

EGY23145.1

Protein Name

WD repeat-containing protein srw1

Genbank Nucleotide ID

DS572702

Gene Name

VDAG_04583

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_04583	EGY23145	EGY23145

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	3.50e-142	472.2	301	601
E3 adaptor/Cullin RING/DCX/DWD	2.40e-24	83.5	434	465

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvga 101
           p+kvldapel+ddfylnL+dW+s nvl v+Lgssvy+w+a+t+ v kl+ l e+d+vtsvswi++gt++a+Gt kg v+i+D+e+++++rt+tgh+arvg+
   Q: 301  PYKVLDAPELADDFYLNLVDWGSANVLGVGLGSSVYMWNAQTSRVNKLCTL-EDDTVTSVSWIQKGTHIAIGTGKGLVQIWDAEKTRRLRTMTGHTARVGS 400
           79*************************************************.99*********************************************** PP
   S: 102  LsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGta 202
           L+Wn+++lssGsrd++i hrdvr++++ l++l +h+qevCGlkwn ++ +LasGGnDn+++vwd+ s++Pl kf++h+aavka+awsP+q++lLasGGGta
   Q: 401  LAWNSHILSSGSRDRSIYHRDVRAPDQWLRKLVGHKQEVCGLKWNCEDGQLASGGNDNKLMVWDKLSETPLWKFSDHTAAVKALAWSPHQRGLLASGGGTA 501
           ***************************************************************************************************** PP
   S: 203  DrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdkkka 302
           Dr+i f++t++g++++e+dtgsqvc+l+wsk+s+e+vsthG+++n+i++wkyps+++va+l+gh++Rvl+la+spdg+ +vt+agDetlrfw+lf ++++
   Q: 502  DRRIIFHDTVKGSVINEVDTGSQVCNLAWSKNSNEIVSTHGYSQNQIVVWKYPSMTQVASLTGHTYRVLYLAMSPDGRVVVTGAGDETLRFWNLFGRRPS 601
           ***********************************************************************************************98765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH+ +v++l++   d+ l+sG++D++++vWD 
   Q: 434  GHKQEVCGLKWncEDGQLASGGNDNKLMVWDK 465
           8**********95449***************5 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MMDDAVEPVV AASAPSPSSN NLPAVGTKGA SVEPTKRSST RFATPPPPVS AGDRGRLEAR 60
QNSDRANVKA GDLRHARRPS DLSRSAALDT SAVDSALLRE MHRSQRESTP GASPSRKRQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGACG ACGCCGTGGA GCCCGTCGTC GCAGCATCGG CGCCAAGCCC GAGCTCGAAC 60
AATCTCCCCG CTGTCGGTAC CAAGGGAGCT TCGGTTGAAC CGACAAAGCG CTCCTCTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

vda:VDAG_04583

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000670	Aegilops tauschii	61.84	1.00e-112	398.00
IUUC-Aml-002003	Ailuropoda melanoleuca	50.29	8.00e-134	468.00
IUUC-Atr-002753	Amborella trichopoda	50.63	2.00e-120	424.00
IUUC-Apl-003212	Anas platyrhynchos	51.47	1.00e-136	478.00
IUUC-Aca-004920	Anolis carolinensis	48.19	9.00e-90	322.00
IUUC-Aly-005442	Arabidopsis lyrata	49.60	2.00e-128	450.00
IUUC-Ath-006938	Arabidopsis thaliana	49.29	2.00e-126	443.00
IUUC-Ago-007784	Ashbya gossypii	44.24	2.00e-119	421.00
IUUC-Acl-008269	Aspergillus clavatus	69.78	0.00e+00	781.00
IUUC-Afl-008432	Aspergillus flavus	69.98	0.00e+00	783.00
IUUC-Afu-008829	Aspergillus fumigatus	72.23	0.00e+00	777.00
IUUC-Ani-009471	Aspergillus nidulans	70.32	0.00e+00	790.00
IUUC-Ang-009711	Aspergillus niger	68.37	0.00e+00	755.00
IUUC-Aor-010118	Aspergillus oryzae	69.98	0.00e+00	783.00
IUUC-Ate-010534	Aspergillus terreus	70.24	0.00e+00	793.00
IUUC-Ame-010685	Astyanax mexicanus	53.39	1.00e-132	464.00
IUUC-Bgr-012013	Blumeria graminis	76.36	0.00e+00	828.00
IUUC-Bta-012586	Bos taurus	51.27	5.00e-136	476.00
IUUC-Bci-013807	Botrytis cinerea	79.26	0.00e+00	846.00
IUUC-Bdi-014981	Brachypodium distachyon	67.11	6.00e-126	442.00
IUUC-Bol-016301	Brassica oleracea	63.66	7.00e-125	438.00
IUUC-Bra-017453	Brassica rapa	49.60	3.00e-125	439.00
IUUC-Cel-018472	Caenorhabditis elegans	53.91	7.00e-116	409.00
IUUC-Cja-019929	Callithrix jacchus	50.76	2.00e-136	477.00
IUUC-Cfa-020977	Canis familiaris	50.57	5.00e-136	476.00
IUUC-Cpo-021537	Cavia porcellus	51.27	3.00e-136	476.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	48.40	1.00e-91	328.00
IUUC-Csa-023389	Chlorocebus sabaeus	51.47	9.00e-137	478.00
IUUC-Cin-025327	Ciona intestinalis	59.54	8.00e-122	428.00
IUUC-Csv-025921	Ciona savignyi	47.61	3.00e-126	443.00
IUUC-Cgl-026631	Colletotrichum gloeosporioides	86.84	0.00e+00	1038.00
IUUC-Cne-026933	Cryptococcus neoformans	59.19	7.00e-139	486.00
IUUC-Cme-027143	Cyanidioschyzon merolae	61.92	3.00e-114	404.00
IUUC-Dre-027470	Danio rerio	51.84	1.00e-128	451.00
IUUC-Dno-029629	Dasypus novemcinctus	62.89	5.00e-118	416.00
IUUC-Dor-030187	Dipodomys ordii	58.27	5.00e-127	446.00
IUUC-Dse-031502	Dothistroma septosporum	56.95	0.00e+00	630.00
IUUC-Dme-031858	Drosophila melanogaster	50.30	2.00e-131	460.00
IUUC-Ete-032562	Echinops telfairi	67.48	4.00e-82	296.00
IUUC-Eca-034210	Equus caballus	51.47	2.00e-136	477.00
IUUC-Fca-035839	Felis catus	50.10	6.00e-132	462.00
IUUC-Fal-036895	Ficedula albicollis	51.66	2.00e-137	480.00
IUUC-Fox-037814	Fusarium oxysporum	92.22	0.00e+00	659.00
IUUC-Fso-038420	Fusarium solani	84.24	0.00e+00	970.00
IUUC-Gmo-039544	Gadus morhua	51.12	1.00e-129	454.00
IUUC-Ggr-039774	Gaeumannomyces graminis	82.52	0.00e+00	952.00
IUUC-Gga-041025	Gallus gallus	51.66	2.00e-137	480.00
IUUC-Gac-041596	Gasterosteus aculeatus	51.43	2.00e-130	457.00
IUUC-Gma-042657	Glycine max	48.66	5.00e-127	446.00
IUUC-Ggo-045599	Gorilla gorilla	50.76	1.00e-130	457.00
IUUC-Hsa-046695	Homo sapiens	50.76	1.00e-136	477.00
IUUC-Hvu-047486	Hordeum vulgare	60.70	4.00e-105	372.00
IUUC-Itr-048192	Ictidomys tridecemlineatus	51.86	4.00e-137	479.00
IUUC-Kpa-049239	Komagataella pastoris	53.11	5.00e-152	529.00
IUUC-Lch-049827	Latimeria chalumnae	51.55	2.00e-131	460.00
IUUC-Lpe-051568	Leersia perrieri	61.43	1.00e-108	385.00
IUUC-Loc-052856	Lepisosteus oculatus	52.09	4.00e-131	459.00
IUUC-Mcc-055601	Macaca mulatta	51.47	9.00e-137	478.00
IUUC-Meu-056276	Macropus eugenii	44.49	4.00e-114	402.00
IUUC-Mor-057113	Magnaporthe oryzae	76.37	0.00e+00	916.00
IUUC-Mpo-057599	Magnaporthe poae	81.05	0.00e+00	952.00
IUUC-Mtr-057689	Medicago truncatula	48.71	9.00e-125	438.00
IUUC-Mla-059048	Melampsora laricipopulina	51.10	5.00e-129	452.00
IUUC-Mga-060097	Meleagris gallopavo	48.36	9.00e-123	431.00
IUUC-Mvi-060465	Microbotryum violaceum	53.65	6.00e-149	518.00
IUUC-Mmr-061151	Microcebus murinus	45.44	4.00e-110	389.00
IUUC-Mdo-063062	Monodelphis domestica	51.47	1.00e-136	477.00
IUUC-Mmu-063731	Mus musculus	51.47	5.00e-137	479.00
IUUC-Mac-064942	Musa acuminata	50.63	2.00e-127	447.00
IUUC-Mpu-066173	Mustela putorius furo	51.27	4.00e-136	476.00
IUUC-Mlu-068030	Myotis lucifugus	50.57	5.00e-136	476.00
IUUC-Nfi-068536	Neosartorya fischeri	69.78	0.00e+00	780.00
IUUC-Ncr-068734	Neurospora crassa	78.05	0.00e+00	873.00
IUUC-Nle-070163	Nomascus leucogenys	51.47	8.00e-137	478.00
IUUC-Opr-070974	Ochotona princeps	62.67	1.00e-101	360.00
IUUC-Ont-072272	Oreochromis niloticus	51.13	5.00e-130	456.00
IUUC-Oan-073634	Ornithorhynchus anatinus	64.97	1.00e-112	397.00
IUUC-Oba-075417	Oryza barthii	61.77	5.00e-109	386.00
IUUC-Obr-076123	Oryza brachyantha	67.43	4.00e-123	433.00
IUUC-Ogl-077294	Oryza glaberrima	66.45	2.00e-121	427.00
IUUC-Ogu-077996	Oryza glumaepatula	66.45	1.00e-121	427.00
IUUC-Oin-080172	Oryza indica	66.45	3.00e-121	426.00
IUUC-Olo-081068	Oryza longistaminata	66.45	2.00e-121	426.00
IUUC-Ome-081250	Oryza meridionalis	66.45	2.00e-121	427.00
IUUC-Oni-083048	Oryza nivara	66.45	2.00e-121	427.00
IUUC-Opu-083333	Oryza punctata	66.45	2.00e-121	427.00
IUUC-Oru-085001	Oryza rufipogon	66.45	2.00e-121	427.00
IUUC-Osa-086243	Oryza sativa	66.45	2.00e-121	427.00
IUUC-Ola-087094	Oryzias latipes	63.72	5.00e-127	446.00
IUUC-Oga-088911	Otolemur garnettii	51.27	3.00e-136	476.00
IUUC-Oar-089508	Ovis aries	51.27	5.00e-136	476.00
IUUC-Pan-092147	Papio anubis	50.76	1.00e-136	477.00
IUUC-Psi-093702	Pelodiscus sinensis	51.46	3.00e-136	476.00
IUUC-Pma-094581	Petromyzon marinus	47.88	5.00e-127	446.00
IUUC-Pno-095139	Phaeosphaeria nodorum	69.01	5.00e-141	493.00
IUUC-Ppa-095366	Physcomitrella patens	52.50	1.00e-134	471.00
IUUC-Pfo-096309	Poecilia formosa	51.02	3.00e-130	456.00
IUUC-Pop-098924	Populus trichocarpa	61.14	8.00e-120	422.00
IUUC-Pca-100565	Procavia capensis	48.48	2.00e-129	454.00
IUUC-Ppe-101924	Prunus persica	50.00	2.00e-126	443.00
IUUC-Pva-102602	Pteropus vampyrus	50.49	3.00e-130	456.00
IUUC-Pgr-103466	Puccinia graminis	53.44	9.00e-132	462.00
IUUC-Ptt-103888	Puccinia triticina	57.82	5.00e-115	406.00
IUUC-Pte-104097	Pyrenophora teres	64.03	0.00e+00	713.00
IUUC-Pyt-104445	Pyrenophora triticirepentis	61.86	0.00e+00	661.00
IUUC-Rno-105028	Rattus norvegicus	51.47	4.00e-137	479.00
IUUC-Sce-106240	Saccharomyces cerevisiae	42.94	7.00e-116	409.00
IUUC-Sha-106538	Sarcophilus harrisii	46.91	2.00e-125	440.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	59.34	2.00e-123	433.00
IUUC-Spo-108369	Schizosaccharomyces pombe	48.13	4.00e-133	466.00
IUUC-Ssl-108391	Sclerotinia sclerotiorum	79.07	0.00e+00	868.00
IUUC-Smo-109041	Selaginella moellendorffii	52.63	1.00e-139	488.00
IUUC-Sit-110550	Setaria italica	63.75	3.00e-123	433.00
IUUC-Sly-111446	Solanum lycopersicum	49.20	1.00e-123	434.00
IUUC-Stu-112491	Solanum tuberosum	49.40	2.00e-124	437.00
IUUC-Sar-113092	Sorex araneus	42.40	1.00e-81	295.00
IUUC-Sbi-114386	Sorghum bicolor	64.40	1.00e-123	434.00
IUUC-Sre-115222	Sporisorium reilianum	54.10	7.00e-148	515.00
IUUC-Ssc-116171	Sus scrofa	51.27	4.00e-136	476.00
IUUC-Tgu-116878	Taeniopygia guttata	45.31	3.00e-110	390.00
IUUC-Tru-118222	Takifugu rubripes	50.40	2.00e-130	457.00
IUUC-Tni-119863	Tetraodon nigroviridis	51.95	2.00e-129	454.00
IUUC-Tca-121599	Theobroma cacao	49.03	8.00e-124	435.00
IUUC-Tre-122249	Trichoderma reesei	81.54	0.00e+00	977.00
IUUC-Tvi-122675	Trichoderma virens	82.16	0.00e+00	984.00
IUUC-Tae-123489	Triticum aestivum	67.11	8.00e-127	445.00
IUUC-Tur-126545	Triticum urartu	55.38	4.00e-100	356.00
IUUC-Tme-127151	Tuber melanosporum	74.19	0.00e+00	757.00
IUUC-Tbe-128056	Tupaia belangeri	58.94	1.00e-99	353.00
IUUC-Ttr-129055	Tursiops truncatus	50.48	2.00e-135	473.00
IUUC-Uma-129555	Ustilago maydis	54.21	4.00e-147	513.00
IUUC-Vvi-131749	Vitis vinifera	49.40	2.00e-126	444.00
IUUC-Xtr-132808	Xenopus tropicalis	51.57	3.00e-137	479.00
IUUC-Xma-133183	Xiphophorus maculatus	51.02	3.00e-130	456.00
IUUC-Yli-134584	Yarrowia lipolytica	55.29	5.00e-162	562.00
IUUC-Zma-135640	Zea mays	63.61	2.00e-123	433.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence