iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d023520	Zm00001d023520_T002	Zm00001d023520_T002
Zm00001d023520	Zm00001d023520_T013	Zm00001d023520_T013
Zm00001d023520	Zm00001d023520_T003	Zm00001d023520_T003
Zm00001d023520	Zm00001d023520_T007	Zm00001d023520_T007
Zm00001d023520	Zm00001d023520_T008	Zm00001d023520_T008
Zm00001d023520	Zm00001d023520_T004	Zm00001d023520_T004
Zm00001d023520	Zm00001d023520_T016	Zm00001d023520_T016
Zm00001d023520	Zm00001d023520_T018	Zm00001d023520_T018
Zm00001d023520	Zm00001d023520_T015	Zm00001d023520_T015
Zm00001d023520	Zm00001d023520_T005	Zm00001d023520_T005
Zm00001d023520	Zm00001d023520_T006	Zm00001d023520_T006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-31	108.6	211	246
UBD/Beta-Prp	2.30e-41	143.9	210	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+dsv++la  ++ tll+sG+  ++++vWD+rtg 
   Q: 211  GHKDSVYALAMnDTgTLLLSGGTEKVVRVWDPRTGS 246
           8**********7447******************996 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl.etgqcleetlsghd 137
           +gh++ v+a+ ++++g +l++g++ ++++vwd++tg+  ++l+gh+d++++l ++  + +lvs    +    w + et +    + s+h 
   Q: 210  KGHKDSVYALAMNDTGTLLLSGGTEKVVRVWDPRTGSKNMKLRGHTDNIRALLVDS-TGRLVSRHFSNEF-FWSVfETFKYCL-FSSNHL 296
           79**************************************************9999.8899986544433.344314444333.667776 PP
   S: 138  gvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
            +v + v+    +++ sGs D+++rlWdl ++++++     htdsv  l+ ++   ++ sg++d++v l dl+t e +  ++  + +v++
   Q: 297  LIVFYNVF----RYCLSGSSDSMIRLWDLGQQRCVHSYAV-HTDSVWALASTPAFGHVYSGGRDQSVYLTDLSTRESLLLCT-NEYPVLQ 380
           44444444....68************************98.********************************998665555.4677887 PP
   S: 228  vrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           + +  +d++ v  + D s++ W  + +++ k++++ +
   Q: 381  LSLQ-DDTIWVA-TTDSSVYGWPAEGRTPQKVFEKGA 415
           7777.5555555.56*******999999999998766 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MHRVGSAGNT AGSTRPRKEK RFTYVLNDAD DKKHCAGINC LAYLDGSIFS TSDHLFSGSR 60
DGTLKRWELN NGDASFSGTF ESHVDWVNDA IIVGDKLVSC SSDTTIKVWN CFSDGACTRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCCACCCC GGTCCTCTCC TGCCGCGTCG CGTTCGCCCC TCGCAGCGGG CAACTCCCAC 60
CGCCGCCGCT TCGCATCCGC CCATCTGCTT CCATCGTCTC ACGGAGGTCG CTCACTTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mor-057284	Magnaporthe oryzae	26.99	4.00e-47	183.00
IUUC-Pca-100458	Procavia capensis	37.10	6.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence