iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114205

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G239400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g030580	Sb06g030580.1	Sb06g030580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-81	274.6	183	551

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle...........kkkeklneenp.........kepkgellkslqklfeelwkskkkavsprellkal 77
           Gl+NlgNtC+mNSvLQ+L++ p+lr+++l                      p           + ++l++ l ++ ++  ++++  +sp ++l + 
   Q: 183  GLNNLGNTCFMNSVLQALLHAPPLRNYFLGdrhnrflcprrT---------PvrhratdadAARVACLACDLDEIYSAAFSGERMPYSPAKFLYSW 269
           9*****************************876666554431.........122223333356667****************************** PP
   S: 78   kkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldls 173
           ++ a+++ +yeqqDa+Ef+  +ld+++e++k                ++++++ + +     ++ +++F g l+s+++c +c+ +s+++ep +d+s
   Q: 270  WQHASNLASYEQQDAHEFFISILDHIHENIKD---------------DQQKSHAQAQGHGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDIS 350
           ******************************33...............334445677788888999******************************* PP
   S: 174  lpvpgkeetkke.......................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksr 246
           l+    ++++                         +l  cLe ft+ e+l+ e+k++ce+c+++qe+ k++++++lP v ++h+kRf+ s+ +k++
   Q: 351  LDMDAGDNSSFGvantkphvrngerglagmnskvsTLMRCLERFTRSERLDAEQKFFCEHCNERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKVS 446
           ***9777654448999999***************************************************************************** PP
   S: 247  ekinkkvefpleLdlspfcts..................peekqke.....kkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevke 319
           +k++ +++fp +Ld++p+++s                        +     + ++e++av+ HsG+l+ GHYv+y +  +++W+++dD  Vt v+e
   Q: 447  RKVDHCLQFPFSLDMAPYLSSsilrsrygnrifpaeasdA-----DavsemSSEFEIFAVITHSGKLEAGHYVTYLRL-NNHWYKCDDAWVTRVEE 536
           *********************7777777777776555542.....05555699*************************.888************** PP
   S: 320  eevleetgstaYvlfYkr 337
           ++v +   s+aY+lfY +
   Q: 537  HTVRT---SQAYMLFYVQ 551
           *****...********76 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTPSAPPPC PHLAAHRLSS RPLRFLRRCL RVRPLGRPEI RRDPRELPRC SPCAAAAPSP 60
TSRLYACLSC AAVFCPSHAA SHASASAGPG HQIAVDVDRA ELFCAACGDQ VYDPDFDHAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCACCC CGTCGGCGCC ACCGCCCTGC CCGCACCTCG CCGCGCACCG CCTGTCGTCG 60
CGCCCGCTGC GCTTCCTCCG CCGCTGCCTG CGCGTGCGCC CGCTCGGCCG CCCCGAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g030580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	83.65	0.00e+00	640.00
IUUC-Aml-002084	Ailuropoda melanoleuca	33.99	9.00e-88	316.00
IUUC-Atr-002653	Amborella trichopoda	56.79	3.00e-173	600.00
IUUC-Apl-003433	Anas platyrhynchos	35.23	1.00e-85	309.00
IUUC-Aca-005347	Anolis carolinensis	33.74	6.00e-87	313.00
IUUC-Aly-006565	Arabidopsis lyrata	48.02	2.00e-127	448.00
IUUC-Ath-007536	Arabidopsis thaliana	47.16	8.00e-127	446.00
IUUC-Ago-007811	Ashbya gossypii	27.24	1.00e-42	166.00
IUUC-Acl-008124	Aspergillus clavatus	30.54	2.00e-55	209.00
IUUC-Afl-008464	Aspergillus flavus	32.03	2.00e-49	188.00
IUUC-Afu-008912	Aspergillus fumigatus	30.20	2.00e-52	199.00
IUUC-Ani-009168	Aspergillus nidulans	31.81	1.00e-55	210.00
IUUC-Ang-009694	Aspergillus niger	30.99	1.00e-55	209.00
IUUC-Aor-010035	Aspergillus oryzae	32.98	8.00e-37	146.00
IUUC-Ate-010382	Aspergillus terreus	31.96	1.00e-50	192.00
IUUC-Ame-011253	Astyanax mexicanus	32.36	4.00e-72	264.00
IUUC-Bgr-012150	Blumeria graminis	26.46	2.00e-45	176.00
IUUC-Bta-013303	Bos taurus	33.45	1.00e-87	316.00
IUUC-Bci-013604	Botrytis cinerea	28.65	4.00e-54	204.00
IUUC-Bdi-014171	Brachypodium distachyon	84.04	0.00e+00	857.00
IUUC-Bol-016509	Brassica oleracea	48.11	2.00e-124	439.00
IUUC-Bra-016962	Brassica rapa	47.64	3.00e-119	421.00
IUUC-Cja-019283	Callithrix jacchus	36.31	4.00e-84	304.00
IUUC-Cfa-021239	Canis familiaris	34.94	2.00e-85	308.00
IUUC-Cpo-022354	Cavia porcellus	33.99	3.00e-89	321.00
IUUC-Csa-023145	Chlorocebus sabaeus	33.99	8.00e-89	320.00
IUUC-Cho-024863	Choloepus hoffmanni	29.34	8.00e-26	110.00
IUUC-Cin-025109	Ciona intestinalis	30.92	5.00e-54	204.00
IUUC-Csv-026214	Ciona savignyi	31.20	2.00e-68	252.00
IUUC-Cgl-026457	Colletotrichum gloeosporioides	27.73	4.00e-51	194.00
IUUC-Cne-027085	Cryptococcus neoformans	31.14	2.00e-59	222.00
IUUC-Dre-027433	Danio rerio	35.29	8.00e-85	306.00
IUUC-Dno-030095	Dasypus novemcinctus	35.87	9.00e-86	309.00
IUUC-Dor-030832	Dipodomys ordii	38.50	2.00e-35	142.00
IUUC-Dse-031415	Dothistroma septosporum	32.43	6.00e-69	254.00
IUUC-Dme-032074	Drosophila melanogaster	31.84	2.00e-67	248.00
IUUC-Ete-033175	Echinops telfairi	27.01	3.00e-42	165.00
IUUC-Eca-033736	Equus caballus	34.74	7.00e-85	306.00
IUUC-Eeu-034814	Erinaceus europaeus	38.46	2.00e-40	159.00
IUUC-Fca-035861	Felis catus	35.39	1.00e-85	309.00
IUUC-Fal-037645	Ficedula albicollis	35.47	1.00e-85	309.00
IUUC-Fox-038046	Fusarium oxysporum	26.83	1.00e-45	176.00
IUUC-Fso-038321	Fusarium solani	27.14	3.00e-45	175.00
IUUC-Gmo-038474	Gadus morhua	39.74	5.00e-60	224.00
IUUC-Ggr-040044	Gaeumannomyces graminis	27.40	1.00e-47	182.00
IUUC-Gga-040624	Gallus gallus	34.16	3.00e-87	314.00
IUUC-Gac-042197	Gasterosteus aculeatus	33.09	1.00e-82	299.00
IUUC-Gma-042897	Glycine max	59.42	0.00e+00	650.00
IUUC-Ggo-044409	Gorilla gorilla	33.81	7.00e-89	320.00
IUUC-Hsa-046521	Homo sapiens	33.81	9.00e-89	320.00
IUUC-Hvu-047739	Hordeum vulgare	85.79	0.00e+00	666.00
IUUC-Itr-048375	Ictidomys tridecemlineatus	33.99	3.00e-88	318.00
IUUC-Kpa-049135	Komagataella pastoris	29.11	1.00e-56	213.00
IUUC-Lch-050537	Latimeria chalumnae	34.41	2.00e-89	322.00
IUUC-Lpe-050969	Leersia perrieri	86.29	0.00e+00	690.00
IUUC-Loc-052765	Lepisosteus oculatus	30.55	3.00e-71	261.00
IUUC-Lma-053105	Leptosphaeria maculans	30.44	9.00e-52	196.00
IUUC-Laf-053571	Loxodonta africana	34.51	4.00e-85	307.00
IUUC-Mcc-055166	Macaca mulatta	33.99	8.00e-89	320.00
IUUC-Mor-057103	Magnaporthe oryzae	26.10	8.00e-50	190.00
IUUC-Mpo-057621	Magnaporthe poae	27.20	4.00e-47	181.00
IUUC-Mtr-057769	Medicago truncatula	57.46	0.00e+00	631.00
IUUC-Mla-059185	Melampsora laricipopulina	28.95	2.00e-37	149.00
IUUC-Mga-059709	Meleagris gallopavo	35.23	1.00e-85	309.00
IUUC-Mvi-060530	Microbotryum violaceum	33.51	9.00e-51	193.00
IUUC-Mmr-060988	Microcebus murinus	33.81	2.00e-88	319.00
IUUC-Mdo-063065	Monodelphis domestica	33.81	2.00e-88	318.00
IUUC-Mmu-063829	Mus musculus	33.69	2.00e-87	315.00
IUUC-Mac-065419	Musa acuminata	53.59	1.00e-153	535.00
IUUC-Mpu-066687	Mustela putorius furo	33.75	5.00e-87	314.00
IUUC-Mlu-067330	Myotis lucifugus	33.94	4.00e-86	311.00
IUUC-Nfi-068423	Neosartorya fischeri	30.20	3.00e-52	198.00
IUUC-Ncr-068809	Neurospora crassa	26.71	3.00e-50	191.00
IUUC-Nle-069084	Nomascus leucogenys	36.34	6.00e-80	290.00
IUUC-Opr-070469	Ochotona princeps	35.36	3.00e-60	224.00
IUUC-Ont-071961	Oreochromis niloticus	32.33	1.00e-81	295.00
IUUC-Oan-073565	Ornithorhynchus anatinus	33.64	6.00e-81	293.00
IUUC-Ocu-074951	Oryctolagus cuniculus	34.53	1.00e-88	319.00
IUUC-Oba-075688	Oryza barthii	85.13	0.00e+00	792.00
IUUC-Obr-076652	Oryza brachyantha	89.38	0.00e+00	677.00
IUUC-Ogl-077910	Oryza glaberrima	87.63	0.00e+00	830.00
IUUC-Ogu-078479	Oryza glumaepatula	87.46	0.00e+00	830.00
IUUC-Oin-079697	Oryza indica	90.34	0.00e+00	701.00
IUUC-Olo-080811	Oryza longistaminata	91.61	6.00e-152	528.00
IUUC-Ome-081706	Oryza meridionalis	87.30	0.00e+00	800.00
IUUC-Oni-083070	Oryza nivara	87.46	0.00e+00	828.00
IUUC-Opu-083605	Oryza punctata	89.81	0.00e+00	654.00
IUUC-Oru-084522	Oryza rufipogon	87.63	0.00e+00	830.00
IUUC-Osa-085351	Oryza sativa	90.05	0.00e+00	714.00
IUUC-Ola-086743	Oryzias latipes	39.22	3.00e-80	291.00
IUUC-Olu-087695	Ostreococcus lucimarinus	34.64	2.00e-55	208.00
IUUC-Oga-089131	Otolemur garnettii	34.77	2.00e-90	325.00
IUUC-Oar-089319	Ovis aries	34.74	5.00e-85	307.00
IUUC-Ptr-090783	Pan troglodytes	34.94	6.00e-86	310.00
IUUC-Pan-092927	Papio anubis	33.99	8.00e-89	320.00
IUUC-Psi-093670	Pelodiscus sinensis	35.47	1.00e-85	309.00
IUUC-Pma-094323	Petromyzon marinus	32.08	3.00e-63	234.00
IUUC-Pno-095141	Phaeosphaeria nodorum	28.21	2.00e-45	176.00
IUUC-Ppa-095413	Physcomitrella patens	54.59	1.00e-124	439.00
IUUC-Pfo-096473	Poecilia formosa	34.47	1.00e-87	316.00
IUUC-Pab-097612	Pongo abelii	33.81	1.00e-88	319.00
IUUC-Pop-099558	Populus trichocarpa	58.48	0.00e+00	655.00
IUUC-Pca-100329	Procavia capensis	34.35	3.00e-89	321.00
IUUC-Ppe-102020	Prunus persica	60.69	0.00e+00	662.00
IUUC-Pva-102721	Pteropus vampyrus	32.55	9.00e-79	286.00
IUUC-Pgr-103657	Puccinia graminis	27.86	4.00e-35	142.00
IUUC-Pte-104340	Pyrenophora teres	31.18	8.00e-43	167.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	32.49	3.00e-49	188.00
IUUC-Rno-105247	Rattus norvegicus	33.81	5.00e-88	317.00
IUUC-Sce-106247	Saccharomyces cerevisiae	25.58	9.00e-39	153.00
IUUC-Sha-107538	Sarcophilus harrisii	37.55	7.00e-42	162.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	25.95	1.00e-48	186.00
IUUC-Spo-108226	Schizosaccharomyces pombe	27.94	1.00e-51	196.00
IUUC-Ssl-108531	Sclerotinia sclerotiorum	28.09	9.00e-52	197.00
IUUC-Smo-109310	Selaginella moellendorffii	48.97	6.00e-141	493.00
IUUC-Sit-109716	Setaria italica	94.15	0.00e+00	890.00
IUUC-Sly-111077	Solanum lycopersicum	49.65	7.00e-147	513.00
IUUC-Stu-112203	Solanum tuberosum	54.39	3.00e-133	467.00
IUUC-Sar-113174	Sorex araneus	34.63	4.00e-78	284.00
IUUC-Sre-115195	Sporisorium reilianum	31.40	3.00e-30	126.00
IUUC-Ssc-115315	Sus scrofa	34.29	1.00e-88	319.00
IUUC-Tgu-116938	Taeniopygia guttata	34.90	2.00e-85	308.00
IUUC-Tru-117622	Takifugu rubripes	33.57	2.00e-86	312.00
IUUC-Tsy-119413	Tarsius syrichta	33.75	1.00e-83	303.00
IUUC-Tni-120119	Tetraodon nigroviridis	33.45	1.00e-86	312.00
IUUC-Tca-121716	Theobroma cacao	58.39	0.00e+00	640.00
IUUC-Tre-122139	Trichoderma reesei	27.99	4.00e-46	177.00
IUUC-Tvi-122599	Trichoderma virens	28.18	2.00e-47	182.00
IUUC-Tae-125608	Triticum aestivum	85.41	0.00e+00	892.00
IUUC-Tme-127115	Tuber melanosporum	31.06	4.00e-68	251.00
IUUC-Tbe-127423	Tupaia belangeri	29.52	5.00e-24	105.00
IUUC-Ttr-129006	Tursiops truncatus	34.25	6.00e-86	310.00
IUUC-Uma-129455	Ustilago maydis	30.74	2.00e-30	127.00
IUUC-Vda-129829	Verticillium dahliae	28.12	3.00e-33	134.00
IUUC-Vvi-131477	Vitis vinifera	51.69	8.00e-141	493.00
IUUC-Xtr-132444	Xenopus tropicalis	34.47	9.00e-89	320.00
IUUC-Xma-133514	Xiphophorus maculatus	33.09	1.00e-85	309.00
IUUC-Yli-134357	Yarrowia lipolytica	28.94	3.00e-46	178.00
IUUC-Zma-134945	Zea mays	95.59	0.00e+00	870.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence