iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014867

UUCD1 version

UUC-BrD-01420

Ensembl Protein ID

BRADI1G60417.1

UniProt Accession

I1H4S1; I1H4S1_BRADI

Protein Name

Uncharacterized protein

Gene Name

LOC100828561

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G60417	BRADI1G60417.1	BRADI1G60417.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-26	91.4	145	177
UBD/Beta-Prp	1.60e-43	149.6	138	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gHt +v++++f +   +ll+s+s D++ik+WD+
   Q: 145  GHTKGVSAIRFfPKygHLLLSASMDCKIKIWDV 177
           8*********995555889*************7 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
            cvh + gh++ v +++f+p +g+ l+s+s d  i++wd+ e+++c++ t  gh+++v+ +++++dg+ + s+++Dr ++ Wd +tg+++ t++ 
   Q: 138  RCVHEWVGHTKGVSAIRFFPkYGHLLLSASMDCKIKIWDVlESKTCMR-TYMGHSKAVRDISFSSDGSKFLSAGYDRNIQYWDTETGQVISTFST 231
           699999999999999999998889999999999999999636677777.9999999999999999999999999999999999999999999988 PP
   S: 178  ghtdsvyslsfdsngke.lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
           g+ ++v +l+ d+++++ l++g  d+++  wd+++g++ +++  h   v+ + f +n+ r+v+ s+D+s+r+W      ++k ++ ++ +++++ 
   Q: 232  GKVPYVVKLNPDEDKQHiLLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 326
           89999999997777755167888899999999999999999999999999999999999999999999999999999999999999997777777 PP
   S: 272  vlsfgdnvlvlgsedskvniwklkk 296
           +++++ n l++ s d+++ i++ k+
   Q: 327  AVHPNSNWLAAQSLDNQILIYSTKE 351
           7799999999999999999998654 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDFHLITKKA SIAPRTTRDI TIPATPPPPT FLLLPSLAPT LPPLLPIDEW IVHNKQSPWA 60
GRREGPPVEL TDEQRQYAEA HAAKKAEKEA RGEGKEKTEV VAKSTFHGKE EKDYQGRSWI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTCC ACTTGATAAC AAAGAAGGCA AGCATTGCGC CAAGAACCAC CAGAGATATT 60
ACAATTCCTG CGACCCCACC GCCTCCTACC TTCCTTTTGC TACCATCGCT GGCACCGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007726	Ashbya gossypii	39.44	2.00e-69	255.00
IUUC-Kpa-049318	Komagataella pastoris	45.83	9.00e-91	326.00
IUUC-Mvi-060349	Microbotryum violaceum	56.13	1.00e-120	426.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.15	2.00e-103	368.00
IUUC-Sce-106339	Saccharomyces cerevisiae	38.97	7.00e-77	280.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	53.77	2.00e-96	345.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence