iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131238

Ensembl Protein ID

VIT_01s0026g00040.t01

UniProt Accession

F6HPP2; F6HPP2_VITVI

Genbank Protein ID

CCB56670.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596002

Gene Name

VIT_01s0026g00040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0026g00040	VIT_01s0026g00040.t01	VIT_01s0026g00040.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-27	92.8	335	371
UBD/Beta-Prp	7.80e-44	150.6	280	498

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f +d t ++++++D++ik WD+ tg +
   Q: 335  GHSKAVRDISFcNDgTKFLTAGYDKNIKYWDTETGQV 371
           8***********999*****************99976 PP

UBD/Beta-Prp

   S: 39   vttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           + ++ l+++ sgh+++v+a++f p+   ++++++ D  +k+wd+ ++gkc++t+ gh++ v+++sf+ +g k+++++ d+ i+ wd+e
   Q: 280  YIPKRLVHTWSGHTKGVSAIRFFPKHGhLILSAGMDTKVKIWDVfNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTE 367
           5677889999999999999999877655999999999999997626899999999999999999999999999999999999999999 PP
   S: 125  tgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           tgq+++++ +g+   v  ++ ++d+ n+l +G+ D+++  Wd++tg++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++  
   Q: 368  TGQVISTFSTGKIPYVVKLNPDDDKqNILLAGMSDKKIVQWDMNTGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 454
           999999888888888888888888899999999999999999999999999988.999999999999999999999999999999998 PP
   S: 212  gecvrtlng.htdnvksvrfspnderlvsgssDgsiriWdlrsg 254
             +++   + h   + s+ ++pn+++l+  s D++i i+ +r +
   Q: 455  PVVIKYISEpHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 498
           87766555559999999999999999999999999999976654 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDLLAKSYTA DDDDGPQHEA EDQNLDNSSP DSSPTRIALP SKSSAPKVDD TTLALAIANT 60
NDKPIDPIQH VVPFNPTYDQ LWAPIYGPAH PYAKDGIAQG MRNHKLGFVE NAAIEPFIFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGAGAAGC CATGGATCTT CTTGCCAAGA GTTACACGGC AGATGATGAC GACGGGCCAC 60
AGCATGAAGC AGAAGACCAA AACCTTGACA ATTCATCGCC GGATTCTTCC CCAACTCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	73.57	0.00e+00	793.00
IUUC-Aml-002243	Ailuropoda melanoleuca	45.98	2.00e-96	345.00
IUUC-Atr-002502	Amborella trichopoda	80.95	0.00e+00	928.00
IUUC-Apl-003885	Anas platyrhynchos	50.37	3.00e-151	527.00
IUUC-Aca-004854	Anolis carolinensis	35.69	1.00e-89	322.00
IUUC-Aly-006158	Arabidopsis lyrata	82.35	0.00e+00	909.00
IUUC-Ath-007474	Arabidopsis thaliana	81.31	0.00e+00	891.00
IUUC-Ago-007726	Ashbya gossypii	38.05	2.00e-72	265.00
IUUC-Acl-008220	Aspergillus clavatus	50.14	6.00e-107	380.00
IUUC-Afl-008473	Aspergillus flavus	38.74	3.00e-114	404.00
IUUC-Afu-008773	Aspergillus fumigatus	40.00	4.00e-117	414.00
IUUC-Ani-009323	Aspergillus nidulans	52.38	2.00e-95	342.00
IUUC-Ang-009851	Aspergillus niger	51.00	2.00e-108	385.00
IUUC-Aor-009950	Aspergillus oryzae	38.74	3.00e-114	404.00
IUUC-Ate-010372	Aspergillus terreus	51.87	2.00e-109	388.00
IUUC-Ame-011660	Astyanax mexicanus	48.04	9.00e-152	529.00
IUUC-Bgr-012230	Blumeria graminis	49.43	2.00e-106	378.00
IUUC-Bta-012568	Bos taurus	50.28	8.00e-152	529.00
IUUC-Bci-013646	Botrytis cinerea	53.61	5.00e-110	390.00
IUUC-Bdi-014199	Brachypodium distachyon	72.38	0.00e+00	793.00
IUUC-Bol-015695	Brassica oleracea	81.09	0.00e+00	912.00
IUUC-Bra-017923	Brassica rapa	80.75	0.00e+00	922.00
IUUC-Cel-018535	Caenorhabditis elegans	39.02	3.00e-124	437.00
IUUC-Cja-019071	Callithrix jacchus	50.28	2.00e-151	528.00
IUUC-Cfa-020559	Canis familiaris	50.28	1.00e-151	528.00
IUUC-Cpo-022356	Cavia porcellus	50.09	5.00e-151	526.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	50.15	2.00e-93	334.00
IUUC-Csa-023125	Chlorocebus sabaeus	50.28	2.00e-151	528.00
IUUC-Cho-024676	Choloepus hoffmanni	47.65	2.00e-139	488.00
IUUC-Cin-025229	Ciona intestinalis	50.19	1.00e-149	522.00
IUUC-Csv-025868	Ciona savignyi	67.39	1.00e-36	142.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	46.61	2.00e-94	338.00
IUUC-Cne-026885	Cryptococcus neoformans	60.29	7.00e-128	450.00
IUUC-Dre-027631	Danio rerio	49.53	4.00e-155	540.00
IUUC-Dno-029815	Dasypus novemcinctus	49.81	3.00e-147	514.00
IUUC-Dor-031143	Dipodomys ordii	48.38	6.00e-128	450.00
IUUC-Dse-031520	Dothistroma septosporum	47.90	2.00e-97	348.00
IUUC-Dme-032050	Drosophila melanogaster	45.05	1.00e-144	505.00
IUUC-Ete-032866	Echinops telfairi	48.20	7.00e-146	509.00
IUUC-Eca-033384	Equus caballus	50.09	8.00e-150	523.00
IUUC-Eeu-034471	Erinaceus europaeus	41.81	5.00e-101	360.00
IUUC-Fca-035727	Felis catus	50.28	9.00e-152	529.00
IUUC-Fal-036774	Ficedula albicollis	50.84	3.00e-154	537.00
IUUC-Fox-037951	Fusarium oxysporum	50.28	5.00e-107	380.00
IUUC-Fso-038287	Fusarium solani	52.48	1.00e-106	379.00
IUUC-Gmo-039670	Gadus morhua	48.76	3.00e-156	544.00
IUUC-Ggr-039764	Gaeumannomyces graminis	47.31	2.00e-102	365.00
IUUC-Gga-040293	Gallus gallus	50.66	5.00e-154	536.00
IUUC-Gac-042159	Gasterosteus aculeatus	47.24	2.00e-155	541.00
IUUC-Gma-044299	Glycine max	83.36	0.00e+00	855.00
IUUC-Ggo-044864	Gorilla gorilla	50.28	2.00e-151	528.00
IUUC-Hsa-046602	Homo sapiens	50.28	2.00e-151	528.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	59.84	2.00e-133	467.00
IUUC-Kpa-049318	Komagataella pastoris	46.41	3.00e-90	325.00
IUUC-Lch-049796	Latimeria chalumnae	42.86	4.00e-122	431.00
IUUC-Lpe-051153	Leersia perrieri	71.04	0.00e+00	811.00
IUUC-Loc-052467	Lepisosteus oculatus	47.42	2.00e-153	535.00
IUUC-Lma-053107	Leptosphaeria maculans	50.00	3.00e-105	374.00
IUUC-Laf-053787	Loxodonta africana	50.09	3.00e-153	534.00
IUUC-Mcc-055706	Macaca mulatta	50.28	2.00e-151	528.00
IUUC-Meu-056757	Macropus eugenii	58.51	8.00e-115	406.00
IUUC-Mor-057079	Magnaporthe oryzae	48.70	9.00e-103	366.00
IUUC-Mpo-057533	Magnaporthe poae	47.85	1.00e-103	369.00
IUUC-Mtr-057950	Medicago truncatula	81.11	0.00e+00	925.00
IUUC-Mla-058910	Melampsora laricipopulina	44.97	2.00e-138	485.00
IUUC-Mga-059366	Meleagris gallopavo	50.66	1.00e-153	535.00
IUUC-Mvi-060349	Microbotryum violaceum	56.79	7.00e-126	443.00
IUUC-Mmr-061209	Microcebus murinus	50.28	3.00e-154	537.00
IUUC-Mdo-062118	Monodelphis domestica	50.66	1.00e-153	535.00
IUUC-Mmu-063173	Mus musculus	50.28	2.00e-151	528.00
IUUC-Mac-065080	Musa acuminata	78.51	0.00e+00	850.00
IUUC-Mpu-066659	Mustela putorius furo	50.28	9.00e-152	529.00
IUUC-Mlu-067029	Myotis lucifugus	50.38	7.00e-152	529.00
IUUC-Nfi-068334	Neosartorya fischeri	40.55	4.00e-118	417.00
IUUC-Ncr-068675	Neurospora crassa	46.47	5.00e-91	327.00
IUUC-Nle-070113	Nomascus leucogenys	50.28	9.00e-152	529.00
IUUC-Opr-070685	Ochotona princeps	59.57	8.00e-137	479.00
IUUC-Ont-071680	Oreochromis niloticus	48.68	3.00e-157	547.00
IUUC-Oan-073573	Ornithorhynchus anatinus	49.10	4.00e-140	490.00
IUUC-Ocu-074074	Oryctolagus cuniculus	50.28	2.00e-154	538.00
IUUC-Oba-075625	Oryza barthii	71.89	0.00e+00	825.00
IUUC-Obr-076510	Oryza brachyantha	71.86	0.00e+00	833.00
IUUC-Ogl-077275	Oryza glaberrima	71.89	0.00e+00	825.00
IUUC-Ogu-078563	Oryza glumaepatula	71.72	0.00e+00	823.00
IUUC-Oin-079898	Oryza indica	82.87	0.00e+00	693.00
IUUC-Olo-081080	Oryza longistaminata	73.56	0.00e+00	744.00
IUUC-Oni-083121	Oryza nivara	71.89	0.00e+00	825.00
IUUC-Opu-083329	Oryza punctata	72.23	0.00e+00	816.00
IUUC-Oru-084807	Oryza rufipogon	70.69	0.00e+00	727.00
IUUC-Osa-086039	Oryza sativa	71.94	0.00e+00	827.00
IUUC-Ola-087149	Oryzias latipes	48.94	7.00e-157	546.00
IUUC-Olu-087627	Ostreococcus lucimarinus	48.27	1.00e-140	492.00
IUUC-Oga-088359	Otolemur garnettii	50.28	2.00e-151	528.00
IUUC-Oar-089390	Ovis aries	50.28	2.00e-151	528.00
IUUC-Ptr-090894	Pan troglodytes	50.28	2.00e-151	528.00
IUUC-Pan-092476	Papio anubis	50.28	2.00e-151	528.00
IUUC-Psi-093527	Pelodiscus sinensis	45.94	3.00e-139	488.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.84	1.00e-103	369.00
IUUC-Ppa-095386	Physcomitrella patens	76.11	0.00e+00	874.00
IUUC-Pfo-096139	Poecilia formosa	48.40	9.00e-155	539.00
IUUC-Pab-097838	Pongo abelii	49.05	3.00e-128	451.00
IUUC-Pop-099962	Populus trichocarpa	90.17	0.00e+00	965.00
IUUC-Pca-100876	Procavia capensis	52.02	3.00e-112	398.00
IUUC-Ppe-101777	Prunus persica	86.57	0.00e+00	920.00
IUUC-Pva-102418	Pteropus vampyrus	50.28	1.00e-151	529.00
IUUC-Pgr-103456	Puccinia graminis	45.79	2.00e-148	518.00
IUUC-Ptt-103731	Puccinia triticina	46.84	3.00e-135	474.00
IUUC-Pte-104386	Pyrenophora teres	49.42	2.00e-102	365.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	49.42	2.00e-102	365.00
IUUC-Rno-105694	Rattus norvegicus	48.96	2.00e-143	501.00
IUUC-Sce-106339	Saccharomyces cerevisiae	35.36	3.00e-75	275.00
IUUC-Sha-106709	Sarcophilus harrisii	49.91	4.00e-153	533.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	54.49	4.00e-98	350.00
IUUC-Smo-108778	Selaginella moellendorffii	61.89	0.00e+00	667.00
IUUC-Sit-110446	Setaria italica	73.68	0.00e+00	805.00
IUUC-Sly-111330	Solanum lycopersicum	83.91	0.00e+00	897.00
IUUC-Stu-112610	Solanum tuberosum	83.75	0.00e+00	894.00
IUUC-Sar-113065	Sorex araneus	36.14	8.00e-35	140.00
IUUC-Sbi-114005	Sorghum bicolor	73.53	0.00e+00	785.00
IUUC-Sre-114988	Sporisorium reilianum	44.27	1.00e-133	469.00
IUUC-Ssc-115760	Sus scrofa	50.28	1.00e-151	529.00
IUUC-Tgu-116493	Taeniopygia guttata	51.22	4.00e-156	543.00
IUUC-Tru-118489	Takifugu rubripes	46.13	4.00e-152	530.00
IUUC-Tsy-119332	Tarsius syrichta	50.28	2.00e-154	538.00
IUUC-Tni-120202	Tetraodon nigroviridis	45.60	9.00e-146	509.00
IUUC-Tca-121429	Theobroma cacao	85.69	0.00e+00	954.00
IUUC-Tre-122162	Trichoderma reesei	52.76	7.00e-111	393.00
IUUC-Tvi-122500	Trichoderma virens	53.31	3.00e-110	391.00
IUUC-Tae-125557	Triticum aestivum	73.59	0.00e+00	803.00
IUUC-Tur-126554	Triticum urartu	73.49	0.00e+00	798.00
IUUC-Tme-126919	Tuber melanosporum	41.05	2.00e-125	442.00
IUUC-Tbe-127968	Tupaia belangeri	47.08	9.00e-140	489.00
IUUC-Ttr-129215	Tursiops truncatus	47.90	3.00e-150	524.00
IUUC-Uma-129622	Ustilago maydis	45.42	8.00e-136	476.00
IUUC-Vda-129750	Verticillium dahliae	51.87	6.00e-108	383.00
IUUC-Vpa-130617	Vicugna pacos	50.85	3.00e-146	510.00
IUUC-Xtr-131865	Xenopus tropicalis	48.40	2.00e-154	538.00
IUUC-Xma-133627	Xiphophorus maculatus	48.32	2.00e-154	538.00
IUUC-Yli-134390	Yarrowia lipolytica	51.59	1.00e-105	375.00
IUUC-Zma-135925	Zea mays	73.73	0.00e+00	788.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence