iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114624

Ensembl Protein ID

Sb01g008930.1

UniProt Accession

A0A1B6QI85; A0A1B6QI85_SORBI

Genbank Protein ID

KXG37626.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G099900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g008930	Sb01g008930.1	Sb01g008930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-13	51.6	121	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf.sd.tllvsGsdDgtikvWDlrtg 33
           ++ + s+ +++ sGs Dg i++WD +++
   Q: 121  SVTWsSNaKFVFSGSSDGLIRCWDSTSF 148
           799*9889****************8876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGSLPPAAKD CSRYCWSPIW QMAIEPSDDA KSTENNCSES GVNGHPNQND SSDSDLSNID 60
DGDNSEDEDG STNTRSSYHV NDFQRLALAC DDGSVRLYHV PESGALTYYR SLPRVSGRTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTCGACCA ACCAGCCCTA CTTGACCTTC CTCTCCCTCA AAACCCTAAC GAGCGGTGAG 60
CCGCCTCTCT CGAGCGCTTC CCACTCTCTC CCACCTGCGC CGCCTGCGGC CTGCCCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	75.04	0.00e+00	1067.00
IUUC-Aml-001310	Ailuropoda melanoleuca	25.27	4.00e-44	172.00
IUUC-Atr-003076	Amborella trichopoda	51.60	0.00e+00	634.00
IUUC-Apl-003367	Anas platyrhynchos	31.36	2.00e-15	74.70
IUUC-Aca-004429	Anolis carolinensis	30.86	6.00e-21	94.40
IUUC-Aly-006271	Arabidopsis lyrata	53.38	0.00e+00	650.00
IUUC-Ath-007331	Arabidopsis thaliana	54.92	0.00e+00	652.00
IUUC-Ago-007843	Ashbya gossypii	25.09	7.00e-26	111.00
IUUC-Acl-008229	Aspergillus clavatus	25.93	4.00e-24	106.00
IUUC-Afl-008438	Aspergillus flavus	25.25	7.00e-22	99.00
IUUC-Afu-008910	Aspergillus fumigatus	26.91	2.00e-23	103.00
IUUC-Ani-009321	Aspergillus nidulans	33.67	9.00e-22	98.20
IUUC-Ang-009592	Aspergillus niger	26.98	5.00e-24	105.00
IUUC-Aor-010220	Aspergillus oryzae	25.25	1.00e-21	97.40
IUUC-Ate-010317	Aspergillus terreus	27.34	9.00e-24	105.00
IUUC-Ame-010957	Astyanax mexicanus	24.72	6.00e-42	164.00
IUUC-Bgr-012057	Blumeria graminis	28.57	2.00e-27	117.00
IUUC-Bta-012473	Bos taurus	25.58	3.00e-42	165.00
IUUC-Bdi-014203	Brachypodium distachyon	79.07	0.00e+00	1115.00
IUUC-Bol-016163	Brassica oleracea	53.71	0.00e+00	667.00
IUUC-Bra-017482	Brassica rapa	53.86	0.00e+00	668.00
IUUC-Cja-019942	Callithrix jacchus	24.53	9.00e-44	171.00
IUUC-Cfa-020549	Canis familiaris	26.87	5.00e-27	115.00
IUUC-Cpo-022088	Cavia porcellus	24.77	7.00e-42	164.00
IUUC-Csa-023773	Chlorocebus sabaeus	24.92	8.00e-46	177.00
IUUC-Cho-024302	Choloepus hoffmanni	24.42	2.00e-41	162.00
IUUC-Cin-025384	Ciona intestinalis	24.80	2.00e-32	133.00
IUUC-Dre-027460	Danio rerio	24.84	4.00e-44	172.00
IUUC-Dno-029594	Dasypus novemcinctus	24.46	9.00e-43	167.00
IUUC-Dor-030564	Dipodomys ordii	23.29	2.00e-19	90.10
IUUC-Dse-031179	Dothistroma septosporum	21.94	2.00e-18	87.40
IUUC-Dme-031603	Drosophila melanogaster	23.96	4.00e-10	59.30
IUUC-Ete-032655	Echinops telfairi	24.11	2.00e-34	139.00
IUUC-Eca-033838	Equus caballus	25.31	3.00e-44	172.00
IUUC-Eeu-034548	Erinaceus europaeus	23.60	4.00e-39	155.00
IUUC-Fca-035715	Felis catus	25.15	2.00e-44	173.00
IUUC-Fal-037394	Ficedula albicollis	24.30	2.00e-42	166.00
IUUC-Gmo-039235	Gadus morhua	24.74	5.00e-44	171.00
IUUC-Ggr-040043	Gaeumannomyces graminis	30.89	2.00e-15	77.40
IUUC-Gga-041172	Gallus gallus	25.28	2.00e-48	186.00
IUUC-Gac-042466	Gasterosteus aculeatus	25.35	2.00e-43	170.00
IUUC-Gma-044222	Glycine max	52.56	0.00e+00	631.00
IUUC-Ggo-045416	Gorilla gorilla	24.51	5.00e-39	155.00
IUUC-Hsa-046115	Homo sapiens	24.92	4.00e-44	172.00
IUUC-Hvu-047229	Hordeum vulgare	74.37	0.00e+00	1044.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	24.77	1.00e-44	174.00
IUUC-Kpa-049370	Komagataella pastoris	29.80	1.00e-16	80.90
IUUC-Lch-050153	Latimeria chalumnae	25.14	1.00e-40	160.00
IUUC-Lpe-051220	Leersia perrieri	78.44	0.00e+00	1018.00
IUUC-Loc-052617	Lepisosteus oculatus	25.81	2.00e-51	196.00
IUUC-Laf-053613	Loxodonta africana	25.08	4.00e-43	168.00
IUUC-Mcc-055707	Macaca mulatta	24.92	9.00e-46	177.00
IUUC-Meu-056800	Macropus eugenii	23.44	1.00e-24	107.00
IUUC-Mor-057245	Magnaporthe oryzae	32.63	3.00e-16	79.70
IUUC-Mpo-057446	Magnaporthe poae	30.89	2.00e-15	77.40
IUUC-Mtr-058748	Medicago truncatula	47.68	1.00e-161	562.00
IUUC-Mga-060018	Meleagris gallopavo	25.35	5.00e-41	161.00
IUUC-Mmr-061115	Microcebus murinus	24.37	1.00e-43	170.00
IUUC-Mdo-062235	Monodelphis domestica	24.37	7.00e-48	184.00
IUUC-Mmu-063158	Mus musculus	25.35	1.00e-43	170.00
IUUC-Mac-065380	Musa acuminata	60.00	0.00e+00	842.00
IUUC-Mpu-065805	Mustela putorius furo	25.16	5.00e-44	172.00
IUUC-Mlu-066951	Myotis lucifugus	25.46	5.00e-44	171.00
IUUC-Nfi-068295	Neosartorya fischeri	30.45	1.00e-22	101.00
IUUC-Ncr-068880	Neurospora crassa	22.18	6.00e-15	75.50
IUUC-Nle-069657	Nomascus leucogenys	24.53	1.00e-43	170.00
IUUC-Opr-070250	Ochotona princeps	24.09	3.00e-42	165.00
IUUC-Ont-072642	Oreochromis niloticus	25.43	9.00e-39	154.00
IUUC-Ocu-074741	Oryctolagus cuniculus	24.42	5.00e-42	165.00
IUUC-Oba-074974	Oryza barthii	77.90	0.00e+00	1064.00
IUUC-Obr-076586	Oryza brachyantha	80.17	0.00e+00	1112.00
IUUC-Ogl-077782	Oryza glaberrima	80.00	0.00e+00	1075.00
IUUC-Ogu-078333	Oryza glumaepatula	77.76	0.00e+00	1056.00
IUUC-Oin-079852	Oryza indica	79.86	0.00e+00	1073.00
IUUC-Olo-080370	Oryza longistaminata	78.46	0.00e+00	1008.00
IUUC-Ome-081442	Oryza meridionalis	78.57	0.00e+00	1060.00
IUUC-Oni-082341	Oryza nivara	77.76	0.00e+00	1060.00
IUUC-Opu-083824	Oryza punctata	78.87	0.00e+00	1061.00
IUUC-Oru-084827	Oryza rufipogon	77.62	0.00e+00	1060.00
IUUC-Osa-085742	Oryza sativa	79.86	0.00e+00	1071.00
IUUC-Ola-086466	Oryzias latipes	24.02	7.00e-34	138.00
IUUC-Olu-087761	Ostreococcus lucimarinus	25.63	4.00e-59	222.00
IUUC-Oga-088721	Otolemur garnettii	25.39	4.00e-34	138.00
IUUC-Oar-089532	Ovis aries	25.16	6.00e-42	164.00
IUUC-Ptr-091604	Pan troglodytes	25.00	2.00e-44	173.00
IUUC-Pan-092060	Papio anubis	30.85	9.00e-21	93.60
IUUC-Psi-093070	Pelodiscus sinensis	25.64	4.00e-43	169.00
IUUC-Pma-094201	Petromyzon marinus	26.42	8.00e-28	117.00
IUUC-Pno-094924	Phaeosphaeria nodorum	25.23	1.00e-10	60.80
IUUC-Ppa-095599	Physcomitrella patens	36.53	2.00e-120	426.00
IUUC-Pfo-097207	Poecilia formosa	25.80	7.00e-38	151.00
IUUC-Pab-097746	Pongo abelii	24.69	7.00e-45	174.00
IUUC-Pop-099991	Populus trichocarpa	55.34	0.00e+00	752.00
IUUC-Pca-100562	Procavia capensis	24.32	2.00e-34	140.00
IUUC-Ppe-101747	Prunus persica	54.25	0.00e+00	729.00
IUUC-Pva-103054	Pteropus vampyrus	25.54	1.00e-44	174.00
IUUC-Pte-104064	Pyrenophora teres	26.80	4.00e-18	86.30
IUUC-Pyt-104595	Pyrenophora triticirepentis	24.58	1.00e-18	87.80
IUUC-Rno-105155	Rattus norvegicus	24.73	3.00e-41	162.00
IUUC-Sce-106369	Saccharomyces cerevisiae	25.13	3.00e-30	126.00
IUUC-Sha-107149	Sarcophilus harrisii	24.51	2.00e-47	182.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	26.23	6.00e-43	168.00
IUUC-Spo-108372	Schizosaccharomyces pombe	25.41	2.00e-41	162.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	24.93	3.00e-18	86.70
IUUC-Smo-108851	Selaginella moellendorffii	39.58	2.00e-131	462.00
IUUC-Sit-110454	Setaria italica	87.80	0.00e+00	1185.00
IUUC-Sly-111875	Solanum lycopersicum	54.67	0.00e+00	711.00
IUUC-Stu-112275	Solanum tuberosum	55.29	0.00e+00	699.00
IUUC-Sar-113254	Sorex araneus	24.06	4.00e-15	75.90
IUUC-Sre-114985	Sporisorium reilianum	30.38	5.00e-10	59.70
IUUC-Tgu-117407	Taeniopygia guttata	26.61	2.00e-21	96.30
IUUC-Tru-118733	Takifugu rubripes	23.91	3.00e-37	149.00
IUUC-Tsy-119213	Tarsius syrichta	30.85	3.00e-20	92.80
IUUC-Tni-120894	Tetraodon nigroviridis	35.45	5.00e-27	114.00
IUUC-Tca-121606	Theobroma cacao	50.27	0.00e+00	680.00
IUUC-Tre-121958	Trichoderma reesei	24.81	3.00e-16	79.70
IUUC-Tvi-122290	Trichoderma virens	25.38	5.00e-18	85.90
IUUC-Tae-125538	Triticum aestivum	76.06	0.00e+00	1089.00
IUUC-Tme-126995	Tuber melanosporum	32.12	1.00e-15	78.20
IUUC-Ttr-128720	Tursiops truncatus	24.53	4.00e-41	162.00
IUUC-Uma-129564	Ustilago maydis	35.45	2.00e-10	60.80
IUUC-Vpa-130412	Vicugna pacos	36.09	4.00e-16	79.30
IUUC-Vvi-131256	Vitis vinifera	53.23	0.00e+00	716.00
IUUC-Xtr-131828	Xenopus tropicalis	22.02	7.00e-33	134.00
IUUC-Xma-133394	Xiphophorus maculatus	27.16	8.00e-42	164.00
IUUC-Yli-134565	Yarrowia lipolytica	28.47	4.00e-18	85.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence