iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114445

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G212700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g018800	Sb01g018800.1	Sb01g018800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.6	257	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+edf   +  + +pC+H++h+dC+  w         + +CP+Cr
   Q: 257  CAVCKEDFspGEVAKQMPCKHIYHTDCIVPW------LELHNSCPICR 298
           ********66444778***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTPAAAYYA AAARKQYFCY QCNRTVLIAV SAAAAGELSC PECHGDFVEE VTVPAPTFIP 60
LPFPFPFASS TTIPAGSNAP APAPAPAAAG SGGSPTFSSS SSSAATSPSQ PNDISSILSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCGAGAG CGAGGAAAAA AAAAAAAAAT CCCAATCCAC CCCCCGCCGC GAGATCGCCG 60
GGCGCCGCCA TGTCGACTCC AGCCGCCGCC TACTACGCCG CCGCCGCGCG CAAGCAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g018800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001128	Aegilops tauschii	83.62	5.00e-63	233.00
IUUC-Bdi-014346	Brachypodium distachyon	84.44	2.00e-86	311.00
IUUC-Cgl-026759	Colletotrichum gloeosporioides	43.00	6.00e-20	91.30
IUUC-Ggr-039947	Gaeumannomyces graminis	39.22	1.00e-15	77.40
IUUC-Hvu-047074	Hordeum vulgare	78.67	9.00e-79	286.00
IUUC-Lpe-050786	Leersia perrieri	63.76	3.00e-84	304.00
IUUC-Meu-056718	Macropus eugenii	51.19	1.00e-22	97.80
IUUC-Mtr-058100	Medicago truncatula	59.15	5.00e-51	194.00
IUUC-Mdo-062131	Monodelphis domestica	50.00	1.00e-21	94.70
IUUC-Oba-075383	Oryza barthii	71.92	7.00e-80	290.00
IUUC-Obr-076643	Oryza brachyantha	76.06	3.00e-82	297.00
IUUC-Ogu-078787	Oryza glumaepatula	72.41	3.00e-81	295.00
IUUC-Oin-079572	Oryza indica	71.15	5.00e-93	333.00
IUUC-Olo-080724	Oryza longistaminata	78.48	4.00e-82	296.00
IUUC-Ome-081113	Oryza meridionalis	72.80	2.00e-80	292.00
IUUC-Oni-082154	Oryza nivara	71.54	2.00e-93	334.00
IUUC-Opu-083222	Oryza punctata	72.31	8.00e-81	293.00
IUUC-Oru-084476	Oryza rufipogon	70.77	9.00e-82	296.00
IUUC-Osa-085350	Oryza sativa	70.77	9.00e-82	296.00
IUUC-Ppa-095942	Physcomitrella patens	48.10	4.00e-45	174.00
IUUC-Pop-098891	Populus trichocarpa	54.29	6.00e-58	216.00
IUUC-Smo-109226	Selaginella moellendorffii	58.18	1.00e-34	140.00
IUUC-Sit-110517	Setaria italica	83.01	2.00e-93	334.00
IUUC-Sre-115230	Sporisorium reilianum	32.77	2.00e-16	79.70
IUUC-Tae-124765	Triticum aestivum	84.44	1.00e-86	312.00
IUUC-Tur-126410	Triticum urartu	83.25	4.00e-71	259.00
IUUC-Tme-127143	Tuber melanosporum	45.54	4.00e-22	97.80
IUUC-Uma-129414	Ustilago maydis	31.67	2.00e-15	76.60
IUUC-Vvi-130992	Vitis vinifera	51.36	1.00e-54	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence