iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113992

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G281700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g027700	Sb01g027700.1	Sb01g027700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-06	28.6	133	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++   + p+v+ CgH+f+ +Cl++w    ++ s +  CP+C+
   Q: 133  CNVCFDIAAE-PVVTKCGHLFCWECLYQW---LHVHSHHRECPVCK 174
           99****9999.999***************...556899999****7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGWTNSTGS GSGSGGGRGS GGRGFMNLHY NNDMFHDSTN AGGGRGRFIG GRSRGRPPQQ 60
HHYRFRRVDA VHRDSPPASL SDQQAASSNS SRHARLTHPI STADKSSTSG TAAPPSNREP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTAATTT GGCTTGTTAT TTACCTGCTC GGTCTCGATC GGTCGCCTCC TCTCTCTCCC 60
TGTGGCCGTG TGGGAAGGGG AAGGGAACCA TACCAAGACG GTGGCGGAGT CCGACGCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g027700

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000170	Aegilops tauschii	81.36	7.00e-53	200.00
IUUC-Bgr-012018	Blumeria graminis	41.51	6.00e-10	57.40
IUUC-Bdi-014041	Brachypodium distachyon	50.23	3.00e-53	201.00
IUUC-Cgl-026743	Colletotrichum gloeosporioides	43.86	7.00e-11	60.80
IUUC-Fso-038195	Fusarium solani	44.07	1.00e-11	63.50
IUUC-Gac-042258	Gasterosteus aculeatus	48.78	9.00e-23	99.00
IUUC-Hvu-047827	Hordeum vulgare	40.62	7.00e-42	163.00
IUUC-Mor-057077	Magnaporthe oryzae	37.29	3.00e-10	58.90
IUUC-Mpo-057431	Magnaporthe poae	41.51	4.00e-11	62.00
IUUC-Ola-086507	Oryzias latipes	48.24	6.00e-24	102.00
IUUC-Olu-087623	Ostreococcus lucimarinus	58.33	3.00e-19	87.40
IUUC-Smo-109079	Selaginella moellendorffii	44.14	1.00e-29	123.00
IUUC-Sit-109695	Setaria italica	58.88	3.00e-92	331.00
IUUC-Sre-115213	Sporisorium reilianum	45.00	5.00e-08	51.60
IUUC-Tae-125326	Triticum aestivum	83.04	4.00e-53	201.00
IUUC-Tur-126111	Triticum urartu	83.49	2.00e-50	191.00
IUUC-Uma-129386	Ustilago maydis	35.82	2.00e-07	49.70
IUUC-Vda-129983	Verticillium dahliae	35.71	3.00e-10	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence