iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104723

Ensembl Protein ID

EDU50490

UniProt Accession

B2WC62; B2WC62_PYRTR

Genbank Protein ID

EDU50490.1

Protein Name

WD domain containing protein

Genbank Nucleotide ID

DS231622

Gene Name

PTRG_07571

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_07571	EDU50490	EDU50490

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-07	28.5	561	590

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Htd+ +++a+ +d  ++++++ D ti vWD
   Q: 561  HTDDAFACAWaDDgIHVATAAQDSTIVVWD 590
           9*********9885559************* PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MTAAAGSMRR PTGVDEGLGA WDQVYISDKK RPFRPTEAGA SPSRLQPDAS RSPAANSPLK 60
VWQLRPHTLS WTCLPSASSH AAPRRPHRSL KEGGPASELS AGQRASMAST TTPHDTTPLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGGCAG CAGCGGGCTC GATGCGACGG CCGACGGGCG TCGACGAGGG GCTTGGTGCC 60
TGGGACCAAG TGTATATATC TGACAAGAAG AGGCCGTTCC GACCGACTGA GGCAGGTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	28.27	7.00e-45	173.00
IUUC-Atr-002734	Amborella trichopoda	29.18	2.00e-49	187.00
IUUC-Aly-006558	Arabidopsis lyrata	30.05	2.00e-43	167.00
IUUC-Ath-006618	Arabidopsis thaliana	29.46	2.00e-42	165.00
IUUC-Bdi-014130	Brachypodium distachyon	28.80	8.00e-45	173.00
IUUC-Bol-015525	Brassica oleracea	29.79	3.00e-46	177.00
IUUC-Bra-017403	Brassica rapa	30.10	5.00e-46	176.00
IUUC-Cre-022745	Chlamydomonas reinhardtii	29.89	4.00e-14	70.50
IUUC-Cme-027214	Cyanidioschyzon merolae	26.21	3.00e-22	99.40
IUUC-Dse-031456	Dothistroma septosporum	38.46	3.00e-69	253.00
IUUC-Gma-043519	Glycine max	31.70	1.00e-48	185.00
IUUC-Hvu-047631	Hordeum vulgare	30.43	2.00e-46	177.00
IUUC-Kpa-049267	Komagataella pastoris	21.80	9.00e-18	83.20
IUUC-Lpe-051582	Leersia perrieri	28.53	1.00e-45	175.00
IUUC-Mtr-058694	Medicago truncatula	31.11	9.00e-49	186.00
IUUC-Mvi-060306	Microbotryum violaceum	23.64	6.00e-07	47.80
IUUC-Mac-065482	Musa acuminata	29.71	5.00e-47	180.00
IUUC-Oba-075962	Oryza barthii	29.18	7.00e-45	172.00
IUUC-Obr-076195	Oryza brachyantha	28.28	2.00e-45	174.00
IUUC-Ogl-077207	Oryza glaberrima	29.69	3.00e-45	174.00
IUUC-Ogu-078765	Oryza glumaepatula	29.44	6.00e-45	173.00
IUUC-Oin-079991	Oryza indica	29.69	4.00e-45	174.00
IUUC-Olo-080659	Oryza longistaminata	27.75	4.00e-39	153.00
IUUC-Ome-081872	Oryza meridionalis	29.44	2.00e-45	174.00
IUUC-Oni-082371	Oryza nivara	28.93	2.00e-44	171.00
IUUC-Opu-083680	Oryza punctata	29.95	9.00e-46	176.00
IUUC-Oru-084444	Oryza rufipogon	29.18	9.00e-45	172.00
IUUC-Osa-086083	Oryza sativa	29.69	4.00e-45	174.00
IUUC-Pop-099666	Populus trichocarpa	29.84	7.00e-47	179.00
IUUC-Pte-104305	Pyrenophora teres	93.53	0.00e+00	1073.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	26.67	7.00e-34	136.00
IUUC-Spo-108140	Schizosaccharomyces pombe	23.94	2.00e-30	124.00
IUUC-Smo-109570	Selaginella moellendorffii	30.67	1.00e-42	165.00
IUUC-Sit-110589	Setaria italica	29.06	2.00e-47	181.00
IUUC-Sly-111186	Solanum lycopersicum	26.48	1.00e-45	175.00
IUUC-Stu-112207	Solanum tuberosum	30.15	6.00e-46	176.00
IUUC-Sbi-114172	Sorghum bicolor	30.71	5.00e-49	186.00
IUUC-Tca-121187	Theobroma cacao	27.68	1.00e-44	171.00
IUUC-Tae-123774	Triticum aestivum	30.00	3.00e-48	184.00
IUUC-Tur-126168	Triticum urartu	30.10	3.00e-46	177.00
IUUC-Vvi-131183	Vitis vinifera	30.63	3.00e-49	187.00
IUUC-Yli-134594	Yarrowia lipolytica	29.22	1.00e-25	108.00
IUUC-Zma-135672	Zea mays	27.23	7.00e-43	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence