iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d029366	Zm00001d029366_T002	Zm00001d029366_T002
Zm00001d029366	Zm00001d029366_T001	Zm00001d029366_T001
Zm00001d029366	Zm00001d029366_T003	Zm00001d029366_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-06	28.7	327	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d  ++ a+ +d + l++G+ D t+++WD r+
   Q: 327  GHLDYSFASAWhPDgRVLATGNQDATCRLWDARS 360
           799999999***99999**************765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAHDLCEDLE LVADDGGFDD YYWDDDFHFH DDDGFSASPT TPASVGAPRQ QQQQQQMGDI 60
SASDYKEGED MQGIPWERLN YTRDQYRRMR LKEYKSYQNL TRSHSGLQQQ LRNLLWPTSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACGGATC GAGACTACGA CGCCGATCCT AGCTAGCTCT CCCGTTTCTG CTCGCAAGTC 60
ACACACAGCT CCGGTAGATC CGCCCCTCGC CTCTGGGCTC CAGGAAGAGA TTAGCTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011044--Quino_amine_DH_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	54.62	8.00e-133	466.00
IUUC-Bdi-015063	Brachypodium distachyon	66.48	2.00e-134	471.00
IUUC-Dse-031456	Dothistroma septosporum	37.50	5.00e-40	157.00
IUUC-Hvu-047809	Hordeum vulgare	58.08	1.00e-148	518.00
IUUC-Lpe-051582	Leersia perrieri	59.92	1.00e-159	555.00
IUUC-Obr-076093	Oryza brachyantha	64.14	3.00e-156	544.00
IUUC-Ogu-078133	Oryza glumaepatula	61.21	5.00e-159	553.00
IUUC-Oin-079185	Oryza indica	58.51	2.00e-154	538.00
IUUC-Olo-080479	Oryza longistaminata	56.59	2.00e-130	458.00
IUUC-Oni-082850	Oryza nivara	61.01	2.00e-158	551.00
IUUC-Pop-099735	Populus trichocarpa	58.91	5.00e-118	416.00
IUUC-Sbi-114172	Sorghum bicolor	70.90	1.00e-173	602.00
IUUC-Tae-123702	Triticum aestivum	56.91	5.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence