iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110989

Ensembl Protein ID

Solyc04g008100.1.1

UniProt Accession

K4BNW6; K4BNW6_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g008100.1	Solyc04g008100.1.1	Solyc04g008100.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-31	108.7	30	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp++f+CpIsl+lM+dPv+l++Gitydr sIe w+++g++tcP+t++ l   + +Pn+t+r++iq+wc +n+
   Q: 30   VPSHFKCPISLDLMSDPVTLSTGITYDRVSIETWIENGNQTCPITKKLLNTLEPIPNHTMRKMIQEWCVANK 101
           89******************************************************************9987 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MISTWRKKRA SKRSNTKKQI EEKTMELLMV PSHFKCPISL DLMSDPVTLS TGITYDRVSI 60
ETWIENGNQT CPITKKLLNT LEPIPNHTMR KMIQEWCVAN KEYGIERIPT PRIPVTSSEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTTCAA CATGGAGGAA GAAAAGAGCA TCAAAGAGGA GTAACACAAA GAAACAAATT 60
GAAGAAAAAA CCATGGAGTT GTTAATGGTT CCTAGCCATT TCAAGTGTCC AATTTCATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101262803

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	43.12	3.00e-100	357.00
IUUC-Gma-043443	Glycine max	53.24	8.00e-105	373.00
IUUC-Mtr-058119	Medicago truncatula	49.00	8.00e-103	366.00
IUUC-Mac-064511	Musa acuminata	41.94	1.00e-85	309.00
IUUC-Oba-075080	Oryza barthii	38.78	1.00e-66	246.00
IUUC-Ogl-076969	Oryza glaberrima	42.48	7.00e-97	347.00
IUUC-Ogu-078872	Oryza glumaepatula	41.26	3.00e-97	348.00
IUUC-Oin-079622	Oryza indica	42.48	7.00e-97	347.00
IUUC-Olo-080664	Oryza longistaminata	41.00	2.00e-62	232.00
IUUC-Oni-082871	Oryza nivara	42.48	7.00e-97	347.00
IUUC-Opu-084061	Oryza punctata	42.14	9.00e-94	336.00
IUUC-Oru-084561	Oryza rufipogon	42.48	4.00e-97	347.00
IUUC-Osa-086045	Oryza sativa	42.48	7.00e-97	347.00
IUUC-Ppa-095659	Physcomitrella patens	35.80	2.00e-65	242.00
IUUC-Pop-099887	Populus trichocarpa	56.18	3.00e-133	467.00
IUUC-Ppe-101692	Prunus persica	56.76	1.00e-124	439.00
IUUC-Sit-109976	Setaria italica	43.10	1.00e-99	355.00
IUUC-Stu-112058	Solanum tuberosum	93.21	0.00e+00	803.00
IUUC-Sbi-114180	Sorghum bicolor	41.65	6.00e-87	313.00
IUUC-Tca-121201	Theobroma cacao	56.88	2.00e-136	478.00
IUUC-Tae-124576	Triticum aestivum	42.18	1.00e-84	306.00
IUUC-Tur-126397	Triticum urartu	47.06	2.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence