iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120967

Ensembl Protein ID

EOY21452

UniProt Accession

A0A061FX52; A0A061FX52_THECC

Genbank Protein ID

EOY21452.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001881

Gene Name

TCM_013015

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_013015	EOY21452	EOY21452

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.10e-33	113.9	29	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           e+p +flCpI+l+lM+dPv+l+sGitydr+sIe wl++g+ tcPvt+q l++ d++Pn++lr++iq+wc en+
   Q: 29   EIPRHFLCPITLDLMKDPVTLSSGITYDRESIETWLEDGNFTCPVTNQLLRSFDQIPNHSLRKMIQDWCVENG 101
           69********************************************************************997 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MFNWRRRKTT GRHGEKRRQQ QQQQHKELEI PRHFLCPITL DLMKDPVTLS SGITYDRESI 60
ETWLEDGNFT CPVTNQLLRS FDQIPNHSLR KMIQDWCVEN GKYGVERIPT PRIPVTSEEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTACCATTCA CAAAGCTACC ATTTACAATT CTTTCTCTGA TATTTTCTGA TATCGGTTCT 60
CAAAACCTTT GGCAATGTTC AATTGGAGGA GAAGAAAGAC CACAGGCCGT CATGGCGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	47.48	2.00e-99	355.00
IUUC-Aly-006171	Arabidopsis lyrata	48.52	6.00e-94	337.00
IUUC-Ath-007692	Arabidopsis thaliana	50.49	2.00e-93	335.00
IUUC-Bol-016269	Brassica oleracea	48.21	5.00e-91	327.00
IUUC-Bra-017285	Brassica rapa	46.97	2.00e-91	328.00
IUUC-Gma-042846	Glycine max	65.14	2.00e-139	488.00
IUUC-Lpe-050847	Leersia perrieri	46.54	1.00e-90	325.00
IUUC-Mtr-057926	Medicago truncatula	60.53	9.00e-130	456.00
IUUC-Mac-064511	Musa acuminata	48.31	1.00e-86	312.00
IUUC-Ogl-076969	Oryza glaberrima	47.02	2.00e-95	342.00
IUUC-Ogu-078872	Oryza glumaepatula	46.17	6.00e-98	350.00
IUUC-Oin-079622	Oryza indica	47.02	2.00e-95	342.00
IUUC-Oni-082871	Oryza nivara	47.02	2.00e-95	342.00
IUUC-Opu-084061	Oryza punctata	45.82	6.00e-93	333.00
IUUC-Osa-086045	Oryza sativa	47.02	2.00e-95	342.00
IUUC-Pop-099237	Populus trichocarpa	69.28	4.00e-148	516.00
IUUC-Ppe-102046	Prunus persica	67.41	4.00e-153	533.00
IUUC-Sit-109976	Setaria italica	49.40	4.00e-103	367.00
IUUC-Sbi-114180	Sorghum bicolor	46.46	1.00e-88	319.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence