iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040063

Ensembl Protein ID

GGTG_01637T0

UniProt Accession

J3NK55; J3NK55_GAGT3

Genbank Protein ID

EJT81659.1

Protein Name

SET1 complex component swd1

Genbank Nucleotide ID

ADBI01000159

Gene Name

GGTG_01637

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_01637	GGTG_01637T0	GGTG_01637T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-13	47.6	64	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+ sv++l++  + ++l+s++  g+  +WDl+ g+
   Q: 64   GHSKSVSSLSWsRCgRYLLSACQGGKAIIWDLSNGK 99
           8**********95569***************98875 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MNLLLSDDYL LQDYPENITN TVRSGHATCL RFNRTGDYLA SGRVDGAVVV WDLDTMGVAR 60
KLRGHSKSVS SLSWSRCGRY LLSACQGGKA IIWDLSNGKR HREVRFRAPV YIAELNPRDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAGAGACA TACAACATCC ATAAGGCGTT TGGCCAATAT ATATGGAAGC TTTCATGACA 60
GGTGATTAAA GGAGGAAATG CAGCCAAGGC TGATCCCAAA GTCGCCCCGC CATATGTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000781--C:chromosome, telomeric region
GO:0005829--C:cytosol
GO:0048188--C:Set1C/COMPASS complex
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0006348--P:chromatin silencing at telomere
GO:0000723--P:telomere maintenance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	28.04	6.00e-36	144.00
IUUC-Aml-002118	Ailuropoda melanoleuca	32.78	5.00e-43	167.00
IUUC-Atr-002777	Amborella trichopoda	30.25	2.00e-38	152.00
IUUC-Apl-004056	Anas platyrhynchos	32.50	4.00e-43	167.00
IUUC-Aca-004999	Anolis carolinensis	31.98	3.00e-43	168.00
IUUC-Aly-006092	Arabidopsis lyrata	30.52	4.00e-41	160.00
IUUC-Ath-006947	Arabidopsis thaliana	29.09	1.00e-40	159.00
IUUC-Ago-007753	Ashbya gossypii	35.90	2.00e-57	214.00
IUUC-Acl-008105	Aspergillus clavatus	55.43	9.00e-131	458.00
IUUC-Afl-008633	Aspergillus flavus	54.91	2.00e-130	457.00
IUUC-Afu-009075	Aspergillus fumigatus	52.59	8.00e-100	355.00
IUUC-Ani-009233	Aspergillus nidulans	57.14	1.00e-144	504.00
IUUC-Ang-009695	Aspergillus niger	55.11	5.00e-133	466.00
IUUC-Aor-009988	Aspergillus oryzae	54.91	2.00e-130	457.00
IUUC-Ate-010313	Aspergillus terreus	55.44	1.00e-135	474.00
IUUC-Ame-011134	Astyanax mexicanus	30.00	3.00e-35	141.00
IUUC-Bgr-012302	Blumeria graminis	53.70	4.00e-132	462.00
IUUC-Bta-012946	Bos taurus	32.88	1.00e-43	169.00
IUUC-Bci-013968	Botrytis cinerea	56.26	2.00e-142	496.00
IUUC-Bdi-014387	Brachypodium distachyon	27.81	3.00e-41	161.00
IUUC-Bra-017414	Brassica rapa	31.15	2.00e-41	162.00
IUUC-Cel-018610	Caenorhabditis elegans	30.27	1.00e-37	149.00
IUUC-Cja-019938	Callithrix jacchus	32.78	9.00e-43	166.00
IUUC-Cfa-020726	Canis familiaris	32.78	6.00e-43	167.00
IUUC-Cpo-021560	Cavia porcellus	31.56	3.00e-37	147.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	44.64	2.00e-24	104.00
IUUC-Csa-024192	Chlorocebus sabaeus	32.88	1.00e-43	169.00
IUUC-Cho-024355	Choloepus hoffmanni	32.88	3.00e-43	167.00
IUUC-Cin-025285	Ciona intestinalis	32.70	3.00e-48	184.00
IUUC-Csv-026366	Ciona savignyi	32.43	7.00e-47	179.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	64.52	8.00e-169	585.00
IUUC-Cne-027092	Cryptococcus neoformans	32.88	5.00e-48	183.00
IUUC-Cme-027137	Cyanidioschyzon merolae	32.53	1.00e-19	89.70
IUUC-Dre-027374	Danio rerio	32.88	2.00e-43	168.00
IUUC-Dno-030003	Dasypus novemcinctus	33.43	5.00e-38	150.00
IUUC-Dor-030355	Dipodomys ordii	32.88	2.00e-43	169.00
IUUC-Dse-031442	Dothistroma septosporum	51.76	2.00e-117	414.00
IUUC-Dme-031932	Drosophila melanogaster	32.92	2.00e-51	195.00
IUUC-Ete-032858	Echinops telfairi	30.69	3.00e-32	131.00
IUUC-Eca-034217	Equus caballus	32.88	2.00e-43	169.00
IUUC-Eeu-035024	Erinaceus europaeus	32.44	2.00e-44	171.00
IUUC-Fca-035370	Felis catus	32.22	5.00e-43	167.00
IUUC-Fal-036628	Ficedula albicollis	32.94	3.00e-41	161.00
IUUC-Fox-037739	Fusarium oxysporum	69.98	0.00e+00	630.00
IUUC-Fso-038094	Fusarium solani	70.48	0.00e+00	632.00
IUUC-Gmo-039088	Gadus morhua	32.03	4.00e-42	164.00
IUUC-Gga-041160	Gallus gallus	32.61	1.00e-43	169.00
IUUC-Gac-041333	Gasterosteus aculeatus	32.16	2.00e-43	168.00
IUUC-Gma-044101	Glycine max	29.24	3.00e-40	157.00
IUUC-Ggo-044657	Gorilla gorilla	32.88	1.00e-43	169.00
IUUC-Hsa-045894	Homo sapiens	32.88	1.00e-43	169.00
IUUC-Hvu-047662	Hordeum vulgare	28.83	7.00e-36	143.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	33.24	2.00e-41	161.00
IUUC-Kpa-049095	Komagataella pastoris	39.12	3.00e-72	264.00
IUUC-Lch-049495	Latimeria chalumnae	35.23	1.00e-22	99.40
IUUC-Lpe-051038	Leersia perrieri	28.50	2.00e-29	122.00
IUUC-Loc-052680	Lepisosteus oculatus	32.61	2.00e-44	172.00
IUUC-Laf-053717	Loxodonta africana	32.78	6.00e-43	167.00
IUUC-Mcc-055007	Macaca mulatta	32.68	3.00e-42	164.00
IUUC-Meu-056494	Macropus eugenii	39.13	9.00e-11	60.10
IUUC-Mor-057173	Magnaporthe oryzae	83.52	0.00e+00	761.00
IUUC-Mpo-057622	Magnaporthe poae	96.69	0.00e+00	835.00
IUUC-Mtr-058687	Medicago truncatula	30.18	3.00e-43	167.00
IUUC-Mla-059057	Melampsora laricipopulina	29.70	3.00e-40	157.00
IUUC-Mga-060037	Meleagris gallopavo	32.87	4.00e-43	167.00
IUUC-Mvi-060321	Microbotryum violaceum	33.56	5.00e-46	177.00
IUUC-Mmr-060755	Microcebus murinus	33.24	2.00e-41	162.00
IUUC-Mdo-061859	Monodelphis domestica	33.15	8.00e-44	169.00
IUUC-Mmu-063755	Mus musculus	32.88	1.00e-43	169.00
IUUC-Mac-065292	Musa acuminata	30.96	7.00e-45	174.00
IUUC-Mpu-065896	Mustela putorius furo	32.88	2.00e-43	168.00
IUUC-Mlu-067927	Myotis lucifugus	32.78	6.00e-43	167.00
IUUC-Nfi-068429	Neosartorya fischeri	54.28	3.00e-134	469.00
IUUC-Ncr-068738	Neurospora crassa	68.04	7.00e-169	585.00
IUUC-Nle-069608	Nomascus leucogenys	32.88	1.00e-43	169.00
IUUC-Opr-070319	Ochotona princeps	31.94	7.00e-42	163.00
IUUC-Ont-071451	Oreochromis niloticus	32.35	5.00e-43	167.00
IUUC-Oan-073445	Ornithorhynchus anatinus	32.23	2.00e-41	162.00
IUUC-Ocu-074341	Oryctolagus cuniculus	32.88	2.00e-43	169.00
IUUC-Oba-075664	Oryza barthii	29.27	4.00e-35	141.00
IUUC-Obr-076630	Oryza brachyantha	29.63	6.00e-36	144.00
IUUC-Ogl-077847	Oryza glaberrima	29.27	4.00e-35	141.00
IUUC-Ogu-077970	Oryza glumaepatula	29.04	9.00e-32	129.00
IUUC-Oin-079374	Oryza indica	29.27	6.00e-35	140.00
IUUC-Olo-080992	Oryza longistaminata	29.27	4.00e-35	141.00
IUUC-Ome-081683	Oryza meridionalis	29.48	1.00e-33	135.00
IUUC-Oni-082594	Oryza nivara	29.27	6.00e-35	140.00
IUUC-Opu-083907	Oryza punctata	29.51	3.00e-35	141.00
IUUC-Oru-084400	Oryza rufipogon	29.27	4.00e-35	140.00
IUUC-Osa-085442	Oryza sativa	29.27	4.00e-35	140.00
IUUC-Ola-086569	Oryzias latipes	32.35	8.00e-43	166.00
IUUC-Oga-088947	Otolemur garnettii	31.01	3.00e-37	147.00
IUUC-Oar-090358	Ovis aries	32.78	9.00e-43	166.00
IUUC-Ptr-091601	Pan troglodytes	32.88	2.00e-43	168.00
IUUC-Pan-092466	Papio anubis	32.88	1.00e-43	169.00
IUUC-Psi-093614	Pelodiscus sinensis	33.06	3.00e-43	167.00
IUUC-Pma-094450	Petromyzon marinus	32.69	8.00e-43	166.00
IUUC-Pno-094819	Phaeosphaeria nodorum	49.59	2.00e-123	434.00
IUUC-Ppa-095157	Physcomitrella patens	30.59	7.00e-17	79.70
IUUC-Pfo-096312	Poecilia formosa	32.08	7.00e-43	166.00
IUUC-Pab-098058	Pongo abelii	32.88	1.00e-43	169.00
IUUC-Pop-099039	Populus trichocarpa	29.72	6.00e-41	160.00
IUUC-Pca-100623	Procavia capensis	32.88	2.00e-43	168.00
IUUC-Ppe-102053	Prunus persica	29.43	4.00e-39	154.00
IUUC-Pva-102779	Pteropus vampyrus	32.14	2.00e-40	158.00
IUUC-Pgr-103398	Puccinia graminis	30.79	2.00e-44	171.00
IUUC-Ptt-103912	Puccinia triticina	31.72	3.00e-45	174.00
IUUC-Pte-104246	Pyrenophora teres	52.88	2.00e-127	447.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	54.36	3.00e-127	446.00
IUUC-Rno-104838	Rattus norvegicus	32.88	1.00e-43	169.00
IUUC-Sce-106229	Saccharomyces cerevisiae	37.98	3.00e-61	227.00
IUUC-Sha-106527	Sarcophilus harrisii	33.15	8.00e-44	169.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	41.99	1.00e-90	325.00
IUUC-Spo-108025	Schizosaccharomyces pombe	41.12	1.00e-80	291.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	56.05	3.00e-140	489.00
IUUC-Smo-109474	Selaginella moellendorffii	33.07	8.00e-36	143.00
IUUC-Sit-110687	Setaria italica	32.05	5.00e-37	147.00
IUUC-Sly-111597	Solanum lycopersicum	29.80	3.00e-39	154.00
IUUC-Stu-112389	Solanum tuberosum	31.73	1.00e-38	152.00
IUUC-Sar-113284	Sorex araneus	33.99	5.00e-27	114.00
IUUC-Sbi-114362	Sorghum bicolor	31.30	7.00e-36	143.00
IUUC-Sre-115146	Sporisorium reilianum	28.51	6.00e-38	150.00
IUUC-Ssc-115604	Sus scrofa	32.78	6.00e-43	167.00
IUUC-Tru-118258	Takifugu rubripes	32.88	2.00e-43	168.00
IUUC-Tsy-119169	Tarsius syrichta	32.01	6.00e-36	143.00
IUUC-Tni-119939	Tetraodon nigroviridis	32.80	3.00e-42	164.00
IUUC-Tca-121010	Theobroma cacao	31.97	4.00e-42	164.00
IUUC-Tre-121944	Trichoderma reesei	71.69	1.00e-175	607.00
IUUC-Tvi-122283	Trichoderma virens	71.46	2.00e-175	607.00
IUUC-Tur-126395	Triticum urartu	28.01	2.00e-36	145.00
IUUC-Tme-127150	Tuber melanosporum	50.00	1.00e-121	428.00
IUUC-Tbe-127745	Tupaia belangeri	26.03	2.00e-18	85.50
IUUC-Ttr-129187	Tursiops truncatus	32.35	2.00e-43	168.00
IUUC-Uma-129654	Ustilago maydis	28.22	7.00e-37	147.00
IUUC-Vda-129788	Verticillium dahliae	63.28	7.00e-174	601.00
IUUC-Vpa-130182	Vicugna pacos	31.19	1.00e-31	129.00
IUUC-Vvi-131557	Vitis vinifera	30.00	2.00e-39	155.00
IUUC-Xtr-132007	Xenopus tropicalis	32.61	9.00e-45	172.00
IUUC-Xma-133909	Xiphophorus maculatus	32.88	7.00e-43	166.00
IUUC-Yli-134524	Yarrowia lipolytica	44.39	5.00e-84	303.00
IUUC-Zma-134821	Zea mays	30.79	2.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence