iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114074

Ensembl Protein ID

Sb01g049790.1

UniProt Accession

C5X139; C5X139_SORBI

Genbank Protein ID

EER95656.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G535100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g049790	Sb01g049790.1	Sb01g049790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-20	72.2	233	264

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++s++ +a+ sd   + s sdD + +vW l+
   Q: 233  HEGSIFRIAWsSDgSKFMSVSDDRSARVWMLT 264
           9**********99999*************876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAGGHLRPG SYLGDVSALS FLPSSPHPLL LAGTGSQLLL YEVGAARLVA SFRVFDGVRV 60
HGIEPRSGGP DSYTLAVFGE RRVKLFSLRF GAEADGGEVD EARLELEQRL PGFDHWVLDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCCG GCGGCCACCT CCGTCCGGGC TCCTACCTGG GGGACGTCTC GGCGCTCTCC 60
TTCCTCCCCT CCTCGCCGCA CCCTCTCCTC CTCGCCGGTA CGCTCCCGTC TCCTTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_01g049790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	64.79	0.00e+00	1277.00
IUUC-Aml-001786	Ailuropoda melanoleuca	22.25	2.00e-37	150.00
IUUC-Atr-003053	Amborella trichopoda	45.13	0.00e+00	1083.00
IUUC-Aca-004886	Anolis carolinensis	28.02	2.00e-30	127.00
IUUC-Aly-005509	Arabidopsis lyrata	43.21	0.00e+00	1014.00
IUUC-Ath-007109	Arabidopsis thaliana	44.52	0.00e+00	1020.00
IUUC-Ago-007817	Ashbya gossypii	28.78	5.00e-22	99.40
IUUC-Acl-008020	Aspergillus clavatus	25.27	3.00e-10	60.50
IUUC-Afu-009035	Aspergillus fumigatus	22.89	8.00e-22	99.00
IUUC-Ani-009359	Aspergillus nidulans	22.97	5.00e-19	89.70
IUUC-Ang-009692	Aspergillus niger	21.67	3.00e-19	90.50
IUUC-Aor-010056	Aspergillus oryzae	22.11	1.00e-13	71.60
IUUC-Ame-011051	Astyanax mexicanus	22.38	3.00e-26	113.00
IUUC-Bgr-012077	Blumeria graminis	24.73	2.00e-11	64.30
IUUC-Bta-012793	Bos taurus	22.88	9.00e-37	148.00
IUUC-Bci-013679	Botrytis cinerea	23.47	8.00e-14	72.40
IUUC-Bdi-014401	Brachypodium distachyon	71.43	0.00e+00	1810.00
IUUC-Bol-015628	Brassica oleracea	43.92	0.00e+00	913.00
IUUC-Bra-017446	Brassica rapa	44.22	0.00e+00	1006.00
IUUC-Cja-018910	Callithrix jacchus	22.17	7.00e-37	148.00
IUUC-Cfa-021260	Canis familiaris	22.42	2.00e-37	150.00
IUUC-Cpo-022205	Cavia porcellus	22.63	6.00e-36	145.00
IUUC-Csa-023510	Chlorocebus sabaeus	21.95	1.00e-35	144.00
IUUC-Cme-027170	Cyanidioschyzon merolae	29.90	8.00e-06	46.20
IUUC-Dre-028004	Danio rerio	23.56	1.00e-30	128.00
IUUC-Dno-029804	Dasypus novemcinctus	22.36	5.00e-37	149.00
IUUC-Dor-030512	Dipodomys ordii	21.92	1.00e-28	121.00
IUUC-Dme-032047	Drosophila melanogaster	24.06	3.00e-14	73.60
IUUC-Ete-033076	Echinops telfairi	27.89	6.00e-27	115.00
IUUC-Eca-033727	Equus caballus	21.50	2.00e-22	100.00
IUUC-Eeu-035210	Erinaceus europaeus	22.13	2.00e-35	144.00
IUUC-Fca-035433	Felis catus	22.98	3.00e-39	156.00
IUUC-Fal-036807	Ficedula albicollis	22.68	2.00e-15	76.60
IUUC-Fox-037749	Fusarium oxysporum	24.81	3.00e-13	70.50
IUUC-Fso-038164	Fusarium solani	25.62	4.00e-18	86.70
IUUC-Gmo-039180	Gadus morhua	22.82	6.00e-24	105.00
IUUC-Gga-040482	Gallus gallus	24.60	4.00e-11	63.20
IUUC-Gac-042066	Gasterosteus aculeatus	21.99	1.00e-25	111.00
IUUC-Gma-042704	Glycine max	45.79	0.00e+00	1053.00
IUUC-Ggo-044942	Gorilla gorilla	21.89	1.00e-35	144.00
IUUC-Hsa-046408	Homo sapiens	21.95	1.00e-35	144.00
IUUC-Hvu-047448	Hordeum vulgare	70.17	0.00e+00	1634.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	22.52	2.00e-39	157.00
IUUC-Kpa-049257	Komagataella pastoris	26.32	6.00e-22	99.00
IUUC-Lch-050170	Latimeria chalumnae	24.73	2.00e-41	164.00
IUUC-Lpe-051575	Leersia perrieri	67.20	0.00e+00	1726.00
IUUC-Loc-052341	Lepisosteus oculatus	27.53	2.00e-16	81.30
IUUC-Lma-053318	Leptosphaeria maculans	20.79	2.00e-18	87.80
IUUC-Laf-054299	Loxodonta africana	21.77	8.00e-33	135.00
IUUC-Mcc-055438	Macaca mulatta	22.31	1.00e-37	151.00
IUUC-Meu-056206	Macropus eugenii	26.27	2.00e-21	97.40
IUUC-Mor-056928	Magnaporthe oryzae	25.28	9.00e-09	55.50
IUUC-Mtr-058455	Medicago truncatula	44.59	0.00e+00	1006.00
IUUC-Mga-059962	Meleagris gallopavo	23.56	1.00e-08	53.90
IUUC-Mvi-060438	Microbotryum violaceum	25.46	5.00e-18	86.30
IUUC-Mmr-061353	Microcebus murinus	21.90	8.00e-36	145.00
IUUC-Mdo-062061	Monodelphis domestica	28.15	3.00e-27	116.00
IUUC-Mmu-064386	Mus musculus	22.76	8.00e-34	138.00
IUUC-Mac-065653	Musa acuminata	51.34	0.00e+00	1274.00
IUUC-Mpu-066420	Mustela putorius furo	21.88	3.00e-37	150.00
IUUC-Mlu-068104	Myotis lucifugus	22.26	3.00e-37	150.00
IUUC-Nfi-068301	Neosartorya fischeri	22.76	7.00e-17	82.40
IUUC-Nle-069836	Nomascus leucogenys	21.95	3.00e-35	143.00
IUUC-Ont-071605	Oreochromis niloticus	24.58	6.00e-41	162.00
IUUC-Oan-073645	Ornithorhynchus anatinus	23.47	1.00e-39	158.00
IUUC-Ocu-074708	Oryctolagus cuniculus	22.37	3.00e-36	147.00
IUUC-Oba-075290	Oryza barthii	70.14	0.00e+00	1779.00
IUUC-Obr-076647	Oryza brachyantha	70.75	0.00e+00	1736.00
IUUC-Ogl-077628	Oryza glaberrima	71.18	0.00e+00	1818.00
IUUC-Ogu-078209	Oryza glumaepatula	68.49	0.00e+00	1699.00
IUUC-Oin-079342	Oryza indica	71.27	0.00e+00	1816.00
IUUC-Olo-080334	Oryza longistaminata	67.52	0.00e+00	1612.00
IUUC-Ome-081776	Oryza meridionalis	61.13	0.00e+00	1424.00
IUUC-Oni-082311	Oryza nivara	71.27	0.00e+00	1817.00
IUUC-Opu-083195	Oryza punctata	67.81	0.00e+00	1701.00
IUUC-Oru-085006	Oryza rufipogon	70.22	0.00e+00	1777.00
IUUC-Osa-085317	Oryza sativa	71.26	0.00e+00	1818.00
IUUC-Ola-087145	Oryzias latipes	22.41	4.00e-28	119.00
IUUC-Olu-087785	Ostreococcus lucimarinus	24.89	1.00e-47	184.00
IUUC-Oga-088206	Otolemur garnettii	21.75	4.00e-36	146.00
IUUC-Oar-089802	Ovis aries	22.48	9.00e-36	145.00
IUUC-Ptr-091528	Pan troglodytes	21.30	1.00e-29	124.00
IUUC-Pan-092782	Papio anubis	21.95	8.00e-36	145.00
IUUC-Psi-093102	Pelodiscus sinensis	29.07	4.00e-29	122.00
IUUC-Pno-095063	Phaeosphaeria nodorum	22.87	2.00e-06	47.40
IUUC-Ppa-095436	Physcomitrella patens	34.69	0.00e+00	732.00
IUUC-Pfo-097423	Poecilia formosa	22.72	9.00e-27	115.00
IUUC-Pab-097763	Pongo abelii	21.84	1.00e-35	144.00
IUUC-Pop-099090	Populus trichocarpa	44.70	0.00e+00	1079.00
IUUC-Pca-100173	Procavia capensis	22.03	2.00e-34	140.00
IUUC-Ppe-101580	Prunus persica	44.56	0.00e+00	1090.00
IUUC-Pva-102715	Pteropus vampyrus	27.57	2.00e-28	120.00
IUUC-Pgr-103424	Puccinia graminis	23.16	1.00e-09	58.20
IUUC-Pte-104316	Pyrenophora teres	21.38	5.00e-08	52.80
IUUC-Pyt-104676	Pyrenophora triticirepentis	20.66	2.00e-07	51.20
IUUC-Rno-105122	Rattus norvegicus	23.51	6.00e-40	159.00
IUUC-Sce-106465	Saccharomyces cerevisiae	24.94	9.00e-20	92.00
IUUC-Sha-107208	Sarcophilus harrisii	23.52	9.00e-35	141.00
IUUC-Spo-108272	Schizosaccharomyces pombe	25.55	8.00e-19	88.60
IUUC-Ssl-108576	Sclerotinia sclerotiorum	24.38	6.00e-08	52.80
IUUC-Smo-108961	Selaginella moellendorffii	30.25	3.00e-125	443.00
IUUC-Sit-109932	Setaria italica	83.63	0.00e+00	2174.00
IUUC-Sly-111685	Solanum lycopersicum	44.37	0.00e+00	1082.00
IUUC-Sar-112998	Sorex araneus	22.07	5.00e-35	142.00
IUUC-Ssc-115619	Sus scrofa	27.27	4.00e-29	122.00
IUUC-Tgu-117485	Taeniopygia guttata	22.56	2.00e-14	73.20
IUUC-Tru-118104	Takifugu rubripes	23.91	2.00e-39	157.00
IUUC-Tni-119995	Tetraodon nigroviridis	23.02	2.00e-35	144.00
IUUC-Tca-121790	Theobroma cacao	46.68	0.00e+00	1152.00
IUUC-Tre-122080	Trichoderma reesei	23.23	2.00e-09	57.40
IUUC-Tvi-122306	Trichoderma virens	24.87	1.00e-12	68.60
IUUC-Tae-125371	Triticum aestivum	71.90	0.00e+00	1836.00
IUUC-Tur-126787	Triticum urartu	71.15	0.00e+00	1757.00
IUUC-Tme-126957	Tuber melanosporum	26.58	5.00e-07	49.30
IUUC-Tbe-128082	Tupaia belangeri	33.04	2.00e-13	70.50
IUUC-Ttr-128387	Tursiops truncatus	27.27	1.00e-28	121.00
IUUC-Vvi-131701	Vitis vinifera	47.61	0.00e+00	1142.00
IUUC-Xtr-132622	Xenopus tropicalis	23.08	6.00e-39	155.00
IUUC-Xma-134014	Xiphophorus maculatus	22.53	4.00e-32	132.00
IUUC-Yli-134589	Yarrowia lipolytica	24.93	3.00e-12	67.00
IUUC-Zma-135732	Zea mays	90.66	0.00e+00	2408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence