iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057710

Ensembl Protein ID

KEH38648

UniProt Accession

I3T296; I3T296_MEDTR

Genbank Protein ID

AFK46638.1; KEH38648.1

Protein Name

PHD finger and bromo-adjacent-like domain protein

Genbank Nucleotide ID

BT146844; CM001218

Gene Name

MTR_2g078310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g078310	KEH38648	KEH38648

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.50e-09	37.3	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+++++ee ++ ++ + C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH-FVCSECSS 188
           78.7*****************************888888887.******86 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAKTRPGKKD MDSYTIRGTN KVVKAGDCVL MRPSDTSKPP YVARVEKIEQ DNRNNVRVRV 60
RWYYRPEESI GGRRQFHGAK ELFLSDHFDV QSAHTIEGKC IVHSFKNYTK LENVGSEDYY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAGAGCCA AATGAATCGT CACGCTCACA CTCAAAAGAG TGAATGAAAC CTTAGGGTTC 60
CTCTGTTCTT CTTCTTAACC CAAAATCACA ATTTTAGGGT TCATAAAAAT TCAACCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g078310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	85.19	2.00e-107	380.00
IUUC-Aly-005717	Arabidopsis lyrata	86.06	4.00e-105	373.00
IUUC-Ath-007631	Arabidopsis thaliana	84.33	4.00e-105	373.00
IUUC-Ate-010345	Aspergillus terreus	39.47	3.00e-04	41.20
IUUC-Bgr-012210	Blumeria graminis	49.09	7.00e-09	54.70
IUUC-Bdi-014153	Brachypodium distachyon	76.39	2.00e-92	330.00
IUUC-Bol-016238	Brassica oleracea	85.58	2.00e-107	380.00
IUUC-Bra-017570	Brassica rapa	83.48	3.00e-107	380.00
IUUC-Fso-038446	Fusarium solani	38.89	4.00e-06	45.10
IUUC-Gga-040290	Gallus gallus	46.00	1.00e-10	61.60
IUUC-Gma-043039	Glycine max	95.37	3.00e-119	419.00
IUUC-Hsa-046760	Homo sapiens	38.46	6.00e-11	62.80
IUUC-Lpe-051400	Leersia perrieri	78.70	2.00e-100	357.00
IUUC-Lma-053190	Leptosphaeria maculans	35.09	5.00e-05	43.90
IUUC-Mmr-061132	Microcebus murinus	38.46	7.00e-11	62.80
IUUC-Mmu-063458	Mus musculus	38.46	6.00e-11	62.80
IUUC-Mac-064749	Musa acuminata	82.87	3.00e-104	370.00
IUUC-Oba-075188	Oryza barthii	75.47	5.00e-91	326.00
IUUC-Obr-076844	Oryza brachyantha	75.00	1.00e-93	335.00
IUUC-Ogl-077260	Oryza glaberrima	74.54	4.00e-93	333.00
IUUC-Ogu-078663	Oryza glumaepatula	77.78	1.00e-94	338.00
IUUC-Oin-079894	Oryza indica	77.31	1.00e-94	337.00
IUUC-Olo-080411	Oryza longistaminata	79.38	2.00e-91	327.00
IUUC-Ome-081623	Oryza meridionalis	77.31	9.00e-94	335.00
IUUC-Oni-082587	Oryza nivara	77.31	1.00e-94	337.00
IUUC-Opu-083591	Oryza punctata	79.17	2.00e-101	360.00
IUUC-Oru-084597	Oryza rufipogon	76.85	7.00e-94	335.00
IUUC-Osa-086057	Oryza sativa	77.31	1.00e-94	337.00
IUUC-Ptr-091328	Pan troglodytes	38.46	6.00e-11	62.40
IUUC-Ppa-095645	Physcomitrella patens	69.41	3.00e-78	283.00
IUUC-Pop-098948	Populus trichocarpa	81.78	1.00e-104	371.00
IUUC-Ppe-101758	Prunus persica	84.26	1.00e-106	377.00
IUUC-Rno-105402	Rattus norvegicus	44.00	5.00e-10	59.70
IUUC-Smo-109649	Selaginella moellendorffii	68.18	3.00e-84	303.00
IUUC-Sit-110474	Setaria italica	75.93	4.00e-99	353.00
IUUC-Sly-111450	Solanum lycopersicum	81.48	1.00e-102	364.00
IUUC-Stu-112123	Solanum tuberosum	82.38	2.00e-101	361.00
IUUC-Sbi-114098	Sorghum bicolor	77.31	8.00e-100	355.00
IUUC-Sre-115140	Sporisorium reilianum	51.02	6.00e-09	56.20
IUUC-Tca-121518	Theobroma cacao	85.19	5.00e-107	379.00
IUUC-Tae-122704	Triticum aestivum	79.17	5.00e-95	339.00
IUUC-Tur-126461	Triticum urartu	64.81	1.00e-73	268.00
IUUC-Ttr-128194	Tursiops truncatus	38.46	3.00e-11	63.90
IUUC-Uma-129425	Ustilago maydis	43.48	3.00e-07	50.40
IUUC-Vvi-131614	Vitis vinifera	87.96	3.00e-109	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence