iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1742__AT4G25230.2	fgenesh2_kg.7__1742__AT4G25230.2	fgenesh2_kg.7__1742__AT4G25230.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	32.7	337	379
UBD/Alpha-Helix/CUE	2.50e-10	40.8	540	578

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + l C+H+fh+ Cl  w  l +  +   +CP+Cr
   Q: 337  CAICREPMAK-AKRLHCNHLFHLGCLRSW--LDQGLNEVYSCPTCR 379
           ********99.888***************..777899999*****8 PP

UBD/Alpha-Helix/CUE

   S: 3    etaleqLkeiFPnldysviqvvLeantgsleaavnnLLeg 42
             ++e+++e++P++++++i ++L ++t+s+  +vnnLL++
   Q: 540  LAMAETVREVMPHVPDEIIFQDL-QRTNSVAVTVNNLLQM 578
           579********************.**************98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGIKYLPLSV ASTALSFVGL QVWTEFSLDR LRADGLIAKN VSLGDSEHAL ELLLASYFTI 60
ALLTNFVLNV YILLVLSLKT LFFGDLYDVE TKKLVERLAN YIIYKGTFLP LVIPPTIFQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGACAGAG AGGCACGGTG CTTTCAGAGA ATTTCACAAC CGACAGCTTC GCGGATTCAG 60
GTTTTTCTGC GAATCGATCC ATTTCTACAA CTCTGATCTC TGCATTTTAT TCCTCCCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0034052--P:positive regulation of plant-type hypersensitive response

KEGG

aly:ARALYDRAFT_492309

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000658	Aegilops tauschii	38.12	2.00e-22	97.80
IUUC-Atr-003008	Amborella trichopoda	55.76	8.00e-180	622.00
IUUC-Ath-006950	Arabidopsis thaliana	97.23	0.00e+00	1102.00
IUUC-Bdi-014169	Brachypodium distachyon	52.35	1.00e-123	436.00
IUUC-Bol-015123	Brassica oleracea	93.62	0.00e+00	1055.00
IUUC-Bra-017662	Brassica rapa	90.83	0.00e+00	954.00
IUUC-Csv-026133	Ciona savignyi	25.09	5.00e-36	145.00
IUUC-Fal-036758	Ficedula albicollis	25.39	1.00e-35	144.00
IUUC-Gmo-039014	Gadus morhua	27.11	6.00e-29	121.00
IUUC-Loc-052758	Lepisosteus oculatus	26.74	3.00e-29	122.00
IUUC-Ppa-095969	Physcomitrella patens	42.83	1.00e-116	413.00
IUUC-Pop-099346	Populus trichocarpa	69.80	0.00e+00	828.00
IUUC-Ppe-102033	Prunus persica	69.34	0.00e+00	794.00
IUUC-Smo-109599	Selaginella moellendorffii	46.08	3.00e-115	408.00
IUUC-Sbi-113957	Sorghum bicolor	51.99	8.00e-144	503.00
IUUC-Tae-125510	Triticum aestivum	47.70	2.00e-101	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence