iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g074070	KEH34895	KEH34895
MTR_3g074070	KEH34896	KEH34896
MTR_3g074070	KEH34894	KEH34894
MTR_3g074070	KEH34897	KEH34897

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-06	28.5	355	387

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ ++  +l++G+ D t+++WD+r
   Q: 355  GHLDYSFSSAWhPNgQILATGNQDTTCRLWDIR 387
           89999*******77799**************86 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDQFNNVDLE FANFEDYVEF EFSDFEDEEQ QTVPENPPRR NTYNTDSDSD SDCEDDFQTV 60
PFLHYFRLFR LIFHCSIQSF HFGLEEQSNV KTDTSAFEAR NGKDIQGIPW EKLNYSRDEY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTTTCTT TCACAACACA CTCCTTCATT TTCTCACATT CCTCTTCTCT TACTTCATTT 60
TCATTCTCTC GACAATGGAC CAATTCAACA ACGTTGATCT CGAATTCGCT AACTTCGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	59.68	9.00e-150	522.00
IUUC-Atr-002734	Amborella trichopoda	73.48	3.00e-179	620.00
IUUC-Aly-005521	Arabidopsis lyrata	73.93	0.00e+00	629.00
IUUC-Ath-007611	Arabidopsis thaliana	75.06	0.00e+00	629.00
IUUC-Bol-015183	Brassica oleracea	74.94	0.00e+00	634.00
IUUC-Bra-017403	Brassica rapa	75.32	0.00e+00	636.00
IUUC-Cme-027214	Cyanidioschyzon merolae	39.74	4.00e-52	199.00
IUUC-Dse-031456	Dothistroma septosporum	30.39	9.00e-40	157.00
IUUC-Gma-044288	Glycine max	85.64	0.00e+00	716.00
IUUC-Hvu-047718	Hordeum vulgare	65.06	1.00e-156	545.00
IUUC-Lpe-051582	Leersia perrieri	63.37	9.00e-162	562.00
IUUC-Mac-065012	Musa acuminata	65.01	2.00e-160	559.00
IUUC-Oba-075469	Oryza barthii	57.18	2.00e-142	498.00
IUUC-Obr-076093	Oryza brachyantha	65.33	3.00e-160	557.00
IUUC-Ogu-078133	Oryza glumaepatula	65.51	5.00e-159	553.00
IUUC-Oin-079185	Oryza indica	62.68	9.00e-155	539.00
IUUC-Olo-080502	Oryza longistaminata	57.18	3.00e-142	497.00
IUUC-Oni-082850	Oryza nivara	65.26	3.00e-158	550.00
IUUC-Opu-083138	Oryza punctata	57.14	1.00e-142	498.00
IUUC-Oru-084351	Oryza rufipogon	57.43	7.00e-143	499.00
IUUC-Osa-085692	Oryza sativa	58.29	6.00e-145	506.00
IUUC-Pop-099735	Populus trichocarpa	81.47	5.00e-153	532.00
IUUC-Pte-104305	Pyrenophora teres	29.77	2.00e-47	183.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	32.98	1.00e-47	183.00
IUUC-Spo-108140	Schizosaccharomyces pombe	29.68	6.00e-42	164.00
IUUC-Smo-109252	Selaginella moellendorffii	64.25	4.00e-160	556.00
IUUC-Sit-110668	Setaria italica	67.19	1.00e-158	551.00
IUUC-Sly-111186	Solanum lycopersicum	75.00	0.00e+00	634.00
IUUC-Stu-111950	Solanum tuberosum	75.00	0.00e+00	635.00
IUUC-Sbi-113990	Sorghum bicolor	65.62	2.00e-165	574.00
IUUC-Tca-121603	Theobroma cacao	67.40	1.00e-179	621.00
IUUC-Tae-123702	Triticum aestivum	64.81	4.00e-157	546.00
IUUC-Tur-126710	Triticum urartu	53.14	8.00e-139	486.00
IUUC-Vvi-131311	Vitis vinifera	68.10	0.00e+00	677.00
IUUC-Yli-134594	Yarrowia lipolytica	28.75	1.00e-36	146.00
IUUC-Zma-135500	Zea mays	55.14	1.00e-138	485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence