iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113980

Ensembl Protein ID

Sb02g042470.1

UniProt Accession

A0A1B6QG73; A0A1B6QG73_SORBI

Genbank Protein ID

KXG36915.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G412000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g042470	Sb02g042470.1	Sb02g042470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-08	34.1	214	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtgv 34
           H +s+ c+a+  d +ll+++s  gt ++++ + +g+
   Q: 214  HRSSIVCVALsRDgRLLATASSKGTvVRIFTVADGN 249
           9**********888***********88899887776 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSASSSAAAA EAELLVHAAF NSTATHFVAA TASGIRVFSC TPLKHVFSKG FVPSPDAGSR 60
SRVITADLAP SGTLAAVVFR PDPSAAAPSD ADDEGDRIRY CSVGLRGHLL RDDDISINSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCGT CTTCCTCTGC CGCCGCTGCC GAGGCCGAGC TGCTGGTGCA CGCCGCGTTC 60
AACAGCACCG CCACCCACTT CGTCGCGGCC ACGGCGTCAG GCATCCGCGT ATTCTCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001045	Aegilops tauschii	39.85	2.00e-58	218.00
IUUC-Lpe-051690	Leersia perrieri	40.40	3.00e-86	311.00
IUUC-Ome-081148	Oryza meridionalis	38.57	7.00e-89	320.00
IUUC-Oni-082906	Oryza nivara	38.13	3.00e-82	298.00
IUUC-Opu-083896	Oryza punctata	40.27	3.00e-99	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence