iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100024

Ensembl Protein ID

POPTR_0006s25610.1

UniProt Accession

B9H901; B9H901_POPTR

Genbank Protein ID

EEE92131.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_415759; POPTR_0006s25610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s25610	POPTR_0006s25610.1	POPTR_0006s25610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-33	114.6	196	234
UBD/Beta-Prp	8.40e-60	203.6	195	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           +H+d v+c+a+   ++ll +Gs+D+t+kvW++++ +++ 
   Q: 196  QHKDCVSCMAYyhAEGLLYTGSYDKTVKVWRVSDKKCVD 234
           5*********986559*****************999986 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dlstgkcvhtlk 91
           ++hk+ ++c+++   + ll tgs+d+t+kvw+v+++k++ s+  he+ v+a+  ++d+    t+s D+ +k+w      +  t +++ +++
   Q: 195  QQHKDCVSCMAYYHAEGLLYTGSYDKTVKVWRVSDKKCVDSFVAHEDSVNALLVNQDDGCVFTCSVDGSVKIWrrvyreNSHTLTMTLKFQ 285
           68999*********************************************************************99877777888888888 PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.... 175
           +   ++l+ls++ ++ +l sGs+d ti+ w+ e+ +   +   +l+gh+ +v c+v  +  +ll+sGs D+t+r+W+ + g+  ++     
   Q: 286  QSPVNALALSSYFNNCFLYSGSSDGTINFWEKEKFSGRFNhggFLQGHRFAVLCLVAIE--KLLFSGSEDTTIRVWRREEGSYFHEClavl 374
           8888888888888*****************777766544479****************9..*****************6666555555552 PP
   S: 176  tgghtdsvysls..fdsng......kelvsgsldgtvklwdlq 210
            g h ++v++l+  +  ++      + + s+sld+t k+w ++
   Q: 375  DG-HRGPVRCLAacL--EMekvvmgFLVYSASLDQTFKVWRVK 414
           77.*********763..33336677***************997 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDFYGRKSLF SFITEERNAP QELNDQELQF SPPRPIKNAP IQFKGRELQF SPPRPSTTHS 60
SKLTLLPPSS PESPWTLSPH HTPSPSLLYH CIASLHRHEG NIYSIAVSKG IVFTGSESNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTCT ATGGCAGGAA ATCTCTCTTT AGCTTCATAA CTGAAGAGAG AAATGCACCG 60
CAAGAACTGA ATGACCAAGA GCTTCAATTT AGCCCTCCAA GGCCTATCAA GAATGCGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0006s25610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	50.32	4.00e-85	308.00
IUUC-Atr-002893	Amborella trichopoda	54.71	3.00e-86	311.00
IUUC-Bdi-014017	Brachypodium distachyon	48.52	5.00e-97	347.00
IUUC-Gma-044257	Glycine max	72.92	4.00e-172	597.00
IUUC-Lpe-051634	Leersia perrieri	44.84	5.00e-95	340.00
IUUC-Mtr-058235	Medicago truncatula	69.32	2.00e-170	592.00
IUUC-Mac-064451	Musa acuminata	62.02	1.00e-129	455.00
IUUC-Ogl-077347	Oryza glaberrima	48.62	1.00e-99	356.00
IUUC-Ogu-079043	Oryza glumaepatula	48.62	1.00e-99	356.00
IUUC-Oin-079372	Oryza indica	48.62	1.00e-99	356.00
IUUC-Ome-081348	Oryza meridionalis	48.76	6.00e-100	357.00
IUUC-Oni-082993	Oryza nivara	48.62	1.00e-99	356.00
IUUC-Opu-083517	Oryza punctata	49.03	8.00e-81	293.00
IUUC-Oru-085049	Oryza rufipogon	48.62	1.00e-99	356.00
IUUC-Osa-085538	Oryza sativa	48.62	1.00e-99	356.00
IUUC-Ppe-101382	Prunus persica	77.08	2.00e-149	521.00
IUUC-Sit-110460	Setaria italica	44.62	2.00e-102	365.00
IUUC-Stu-112837	Solanum tuberosum	70.44	3.00e-171	594.00
IUUC-Sbi-113780	Sorghum bicolor	48.24	7.00e-95	340.00
IUUC-Tca-121243	Theobroma cacao	77.01	0.00e+00	687.00
IUUC-Tae-123251	Triticum aestivum	49.86	3.00e-101	361.00
IUUC-Vvi-131707	Vitis vinifera	74.52	0.00e+00	631.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence