iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095966

Ensembl Protein ID

PP1S301_43V6.1

UniProt Accession

A9TRZ5; A9TRZ5_PHYPA

Genbank Protein ID

EDQ53817.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545190

Gene Name

PHYPADRAFT_171600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S301_43V6	PP1S301_43V6.1	PP1S301_43V6.1
PP1S301_43V6	PP1S301_43V6.2	PP1S301_43V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-28	98.3	215	247

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tl....lvsGsdDgtikvW 28
           H d+v+++a+ ++ +l    ++s+s Dgt+ +W
   Q: 215  HVDWVRDVAWaPNlGLvkstIASASQDGTVVIW 247
           9**********6555555569************ PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGPTRAEQFV ESGHQDVVHD VAVDYYGKRL ATCSSDRLIK VFALGPAGDA AVATALVTLA 60
GHDGPVWQVA WAHPKFGSIL ASCSYDRKVI IWREGAENEW QQAQVFQEHE SSVNSICWAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGAATTAG GATTTGGTTT TTGGAAAGTT TGGACGGGGT GATTTTTGCA GCATTCCGAG 60
AGATTGTGAA CGTCTTAGTG ATCGGATCGG TTGGTCGCAA GACTAAGCAG TGTTGCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_171600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015779	Brassica oleracea	68.46	3.00e-120	424.00
IUUC-Bra-017934	Brassica rapa	67.79	7.00e-120	422.00
IUUC-Csv-025926	Ciona savignyi	52.98	1.00e-87	315.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	52.01	1.00e-70	258.00
IUUC-Kpa-049148	Komagataella pastoris	49.15	2.00e-75	274.00
IUUC-Mtr-058412	Medicago truncatula	68.77	6.00e-124	436.00
IUUC-Mla-058966	Melampsora laricipopulina	46.50	1.00e-76	278.00
IUUC-Olu-087893	Ostreococcus lucimarinus	50.17	2.00e-78	284.00
IUUC-Ppe-101278	Prunus persica	71.48	6.00e-125	439.00
IUUC-Pgr-103573	Puccinia graminis	48.61	2.00e-76	278.00
IUUC-Ptt-103700	Puccinia triticina	49.52	8.00e-72	262.00
IUUC-Sly-111852	Solanum lycopersicum	70.13	7.00e-123	432.00
IUUC-Stu-112195	Solanum tuberosum	70.47	2.00e-123	434.00
IUUC-Sbi-114229	Sorghum bicolor	69.97	4.00e-122	429.00
IUUC-Ssc-115995	Sus scrofa	57.05	7.00e-48	182.00
IUUC-Vvi-130868	Vitis vinifera	72.15	8.00e-126	442.00
IUUC-Yli-134559	Yarrowia lipolytica	53.24	4.00e-75	273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence