iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110574

Ensembl Protein ID

Si001046m

UniProt Accession

K3XGM5; K3XGM5_SETIT

Genbank Protein ID

KQL04743.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003532

Gene Name

LOC101785805; SETIT_001046mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si001046m.g	Si001046m	Si001046m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-19	70.6	225	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af...sd.tllvsGsdDgtikvWDlr 31
           gH+++vt+l  ++    + + l+sG+ D+ti++W+++
   Q: 225  GHSAPVTALvdKLlvdGEsKVLASGGEDCTIRLWSMS 261
           899999997554588633588*************976 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MRNYFIEVPP SVPNWPPARH GGHRCTALGF SSPATAMSAP PARTLADLDG DVLAHCAGYL 60
GHRDVASLAR ACRPLRAAAY SDAVWYRLFR DQWPFEKIRG AVGLRELYIR RHTEVHQMKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGAATT ATTTTATAGA AGTTCCTCCC TCCGTTCCAA ATTGTAAGTT GTTTGGTTTT 60
CTAGGTGCAT GGATATTATT ATAATTTAAA AAAAGTAAAA CCACCTGCAA ACTAAAATAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	46.67	3.00e-96	345.00
IUUC-Bdi-014621	Brachypodium distachyon	74.69	0.00e+00	669.00
IUUC-Gma-043867	Glycine max	44.78	1.00e-102	366.00
IUUC-Hvu-047817	Hordeum vulgare	73.91	0.00e+00	696.00
IUUC-Lpe-051161	Leersia perrieri	75.11	0.00e+00	676.00
IUUC-Mtr-057899	Medicago truncatula	49.20	2.00e-77	281.00
IUUC-Mac-065373	Musa acuminata	54.16	5.00e-108	384.00
IUUC-Oba-075705	Oryza barthii	76.00	0.00e+00	704.00
IUUC-Obr-076913	Oryza brachyantha	76.96	0.00e+00	710.00
IUUC-Ogl-077871	Oryza glaberrima	76.21	0.00e+00	704.00
IUUC-Ogu-078128	Oryza glumaepatula	76.42	0.00e+00	708.00
IUUC-Oin-079947	Oryza indica	76.63	0.00e+00	710.00
IUUC-Olo-080246	Oryza longistaminata	74.24	5.00e-162	563.00
IUUC-Ome-081308	Oryza meridionalis	75.73	0.00e+00	708.00
IUUC-Oni-082542	Oryza nivara	76.63	0.00e+00	710.00
IUUC-Opu-083600	Oryza punctata	76.00	0.00e+00	689.00
IUUC-Oru-084880	Oryza rufipogon	76.42	0.00e+00	709.00
IUUC-Osa-085335	Oryza sativa	76.24	3.00e-162	563.00
IUUC-Ppa-095334	Physcomitrella patens	36.25	7.00e-68	250.00
IUUC-Pop-099428	Populus trichocarpa	51.14	1.00e-81	296.00
IUUC-Ppe-101795	Prunus persica	48.63	3.00e-87	314.00
IUUC-Smo-108689	Selaginella moellendorffii	35.98	4.00e-55	208.00
IUUC-Sly-111776	Solanum lycopersicum	42.40	6.00e-89	320.00
IUUC-Stu-112081	Solanum tuberosum	46.21	2.00e-56	211.00
IUUC-Sbi-114123	Sorghum bicolor	83.37	0.00e+00	779.00
IUUC-Tca-120973	Theobroma cacao	45.95	7.00e-111	393.00
IUUC-Tae-124174	Triticum aestivum	74.12	0.00e+00	703.00
IUUC-Vvi-131356	Vitis vinifera	47.03	9.00e-115	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence