iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064999

Ensembl Protein ID

GSMUA_Achr2P00320_001

UniProt Accession

M0S3X3; M0S3X3_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr2G00320_001	GSMUA_Achr2T00320_001	GSMUA_Achr2P00320_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-26	91.9	511	543
UBD/Beta-Prp	1.10e-44	153.7	467	717

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H ++v+++af  ++  l +v+++dD+ ikvWDl
   Q: 511  HVGGVNDIAFshPSkQLcVVTCGDDKLIKVWDL 543
           99********99654334799***********8 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkg 92
           +  it v +spd++l+  +++ + i ++ ++ ++    + ++  h ++v+++ fs+ +k    vt+++D++ikvwdl+    + +++g
   Q: 467  SISITRVIWSPDGNLIGIAFTKHLIHLHGYQAPNDlcqVIEIDAHVGGVNDIAFSHPSKqlCVVTCGDDKLIKVWDLNGQR-LFVFEG 553
           446888999*********************9988767777889************99998999**************7655.668*** PP
   S: 93   hedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl..Drtvrl..Wdlktgkllrt 174
           he+ v+s+  ++  + +++ s+s d  i+ w  ++     + +++ + + +++ ++ dg+ l+s+++  D+ + l  W+ + g++ r+
   Q: 554  HEAPVYSICPHRkeNIQFIFSTSLDGKIKAWLYDNIGSRVDYDAPGR-WSTTMLYSADGSRLFSCGTskDGDCFLveWNESEGSIKRQ 640
           ********99998666***************9999888886666655.888888888898888886522554433338779******* PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW 249
            tg  ++s   ++fd  +++++++++d+ +k+wd+ + +++ + ++    +++  +rf +++++l++++ D+  +i 
   Q: 641  YTGFRKKSTVVVQFDTAQNHFLAAGEDNLIKFWDVDNINMLTSTEADGGLPSRprLRFNKEGNLLAVTTVDNGFKIL 717
           *************************************9999999998877765226666888999998888887774 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKESFHKLEQ ESGFFFNMKY FEEKAQAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRHDR ATAVEILIKD LKVFSTFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCGC TAAGCCGGGA GCTGGTGTTC CTCATACTCC AGTTCCTGGA TGAGGAGAAG 60
TTCAAGGAAT CGTTCCACAA GTGAGTTTCT TGCATGCTTG GCTGCTCGGT TTTGTTTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000072	Aegilops tauschii	70.53	0.00e+00	1566.00
IUUC-Aly-005503	Arabidopsis lyrata	67.66	0.00e+00	1571.00
IUUC-Ath-006901	Arabidopsis thaliana	67.66	0.00e+00	1575.00
IUUC-Bdi-014677	Brachypodium distachyon	74.44	0.00e+00	1759.00
IUUC-Bol-015826	Brassica oleracea	66.67	0.00e+00	1536.00
IUUC-Bra-017791	Brassica rapa	67.20	0.00e+00	1526.00
IUUC-Lpe-050951	Leersia perrieri	73.64	0.00e+00	1699.00
IUUC-Mtr-058168	Medicago truncatula	70.45	0.00e+00	1695.00
IUUC-Ppe-102061	Prunus persica	68.95	0.00e+00	1649.00
IUUC-Sit-110487	Setaria italica	73.96	0.00e+00	1782.00
IUUC-Sly-111169	Solanum lycopersicum	70.33	0.00e+00	1283.00
IUUC-Stu-112369	Solanum tuberosum	69.86	0.00e+00	1277.00
IUUC-Sbi-113873	Sorghum bicolor	74.85	0.00e+00	1779.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence