iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bci-013820

Ensembl Protein ID

Bcin11g04150.1

UniProt Accession

A6RRD4; ERB1_BOTFB

Genbank Protein ID

EDN18091.1

Protein Name

Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

CH476851

Gene Name

erb1; BC1G_03375

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bcin11g04150	Bcin11g04150.1	Bcin11g04150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-15	55.4	414	451

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH ++v++la  ++ t l++G+dDgt++vW+l tg++l
   Q: 414  GHDGRVRSLAIdPSgTWLATGGDDGTVRVWELLTGKQL 451
           8***********666*******************9987 PP

Organism

Botrytis cinerea

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAPPTNQRKR KAVTRDEPEI SDVESEAEFG DGILEGILSQ SEDESDDSAA EEDSEDEEDL 60
DEEELEALDS DEVPSENGEG EGSMTRTSLN KINADEDDDK PNYTVVKDAN GGERYVYEEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACCTC CAACAAACCA ACGAAAGCGC AAAGCTGTTA CCCGAGATGA ACCTGAGATA 60
TCCGATGTCG AATCTGAGGC AGAATTTGGC GATGGAATTT TAGAAGGCAT CTTGTCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0539--Nucleus
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0006364--P:rRNA processing

KEGG

bfu:BC1G_03375

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.14	3.00e-110	391.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.17	5.00e-131	459.00
IUUC-Atr-003141	Amborella trichopoda	38.74	2.00e-74	271.00
IUUC-Apl-003545	Anas platyrhynchos	39.59	5.00e-116	409.00
IUUC-Aly-005649	Arabidopsis lyrata	42.27	2.00e-136	478.00
IUUC-Ath-007625	Arabidopsis thaliana	42.43	3.00e-130	457.00
IUUC-Ago-007958	Ashbya gossypii	55.49	0.00e+00	746.00
IUUC-Acl-008344	Aspergillus clavatus	68.15	0.00e+00	874.00
IUUC-Afl-008616	Aspergillus flavus	63.43	0.00e+00	917.00
IUUC-Afu-009083	Aspergillus fumigatus	62.33	0.00e+00	860.00
IUUC-Ani-009365	Aspergillus nidulans	62.50	0.00e+00	892.00
IUUC-Ang-009796	Aspergillus niger	67.98	0.00e+00	889.00
IUUC-Aor-010015	Aspergillus oryzae	63.43	0.00e+00	917.00
IUUC-Ate-010537	Aspergillus terreus	63.61	0.00e+00	923.00
IUUC-Ame-011767	Astyanax mexicanus	50.62	1.00e-68	251.00
IUUC-Bgr-012286	Blumeria graminis	72.77	0.00e+00	1090.00
IUUC-Bta-013569	Bos taurus	42.25	2.00e-142	497.00
IUUC-Bdi-014477	Brachypodium distachyon	41.80	4.00e-137	480.00
IUUC-Bol-016099	Brassica oleracea	41.67	3.00e-136	477.00
IUUC-Bra-017174	Brassica rapa	41.82	6.00e-137	480.00
IUUC-Cel-018201	Caenorhabditis elegans	39.38	6.00e-115	406.00
IUUC-Cja-019009	Callithrix jacchus	37.01	9.00e-120	422.00
IUUC-Cfa-020173	Canis familiaris	39.19	7.00e-131	459.00
IUUC-Cpo-021796	Cavia porcellus	42.56	5.00e-141	493.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.32	4.00e-125	440.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.41	1.00e-148	518.00
IUUC-Cin-025782	Ciona intestinalis	42.62	1.00e-150	525.00
IUUC-Csv-026352	Ciona savignyi	41.43	2.00e-145	508.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	64.15	0.00e+00	813.00
IUUC-Cne-027004	Cryptococcus neoformans	48.08	6.00e-180	622.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.76	1.00e-108	385.00
IUUC-Dre-028658	Danio rerio	43.41	2.00e-152	531.00
IUUC-Dno-028883	Dasypus novemcinctus	43.08	3.00e-146	510.00
IUUC-Dor-031031	Dipodomys ordii	42.04	2.00e-146	511.00
IUUC-Dse-031443	Dothistroma septosporum	59.92	0.00e+00	828.00
IUUC-Dme-031786	Drosophila melanogaster	38.78	8.00e-148	516.00
IUUC-Eca-033677	Equus caballus	42.72	1.00e-142	498.00
IUUC-Eeu-035310	Erinaceus europaeus	38.57	8.00e-108	382.00
IUUC-Fca-035888	Felis catus	41.42	5.00e-143	499.00
IUUC-Fal-037438	Ficedula albicollis	41.92	6.00e-117	412.00
IUUC-Fox-037973	Fusarium oxysporum	74.26	0.00e+00	1031.00
IUUC-Fso-038187	Fusarium solani	74.85	0.00e+00	1040.00
IUUC-Gmo-039114	Gadus morhua	41.01	2.00e-136	478.00
IUUC-Ggr-039746	Gaeumannomyces graminis	66.10	0.00e+00	1019.00
IUUC-Gga-040631	Gallus gallus	41.64	4.00e-84	303.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.64	4.00e-142	496.00
IUUC-Gma-044215	Glycine max	40.68	4.00e-141	493.00
IUUC-Ggo-045587	Gorilla gorilla	42.45	7.00e-149	519.00
IUUC-Hsa-046319	Homo sapiens	42.56	7.00e-149	519.00
IUUC-Hvu-047526	Hordeum vulgare	42.20	5.00e-132	463.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.52	6.00e-142	496.00
IUUC-Kpa-049221	Komagataella pastoris	50.81	0.00e+00	686.00
IUUC-Lch-049640	Latimeria chalumnae	42.86	8.00e-156	542.00
IUUC-Lpe-051135	Leersia perrieri	40.03	2.00e-117	414.00
IUUC-Loc-051930	Lepisosteus oculatus	43.38	4.00e-155	540.00
IUUC-Lma-053290	Leptosphaeria maculans	70.47	0.00e+00	947.00
IUUC-Laf-053903	Loxodonta africana	39.34	2.00e-121	427.00
IUUC-Mcc-055471	Macaca mulatta	42.41	3.00e-149	520.00
IUUC-Meu-056190	Macropus eugenii	43.20	5.00e-145	506.00
IUUC-Mor-057135	Magnaporthe oryzae	73.92	0.00e+00	987.00
IUUC-Mpo-057475	Magnaporthe poae	65.58	0.00e+00	959.00
IUUC-Mtr-058689	Medicago truncatula	40.17	3.00e-127	447.00
IUUC-Mla-059149	Melampsora laricipopulina	48.43	1.00e-180	624.00
IUUC-Mga-059645	Meleagris gallopavo	36.33	2.00e-47	180.00
IUUC-Mvi-060485	Microbotryum violaceum	46.53	4.00e-163	567.00
IUUC-Mmr-061674	Microcebus murinus	42.39	8.00e-142	495.00
IUUC-Mdo-062973	Monodelphis domestica	43.04	2.00e-151	528.00
IUUC-Mmu-064180	Mus musculus	42.09	1.00e-144	504.00
IUUC-Mac-064535	Musa acuminata	37.50	5.00e-81	294.00
IUUC-Mpu-066406	Mustela putorius furo	42.43	9.00e-147	512.00
IUUC-Mlu-067795	Myotis lucifugus	42.25	3.00e-133	467.00
IUUC-Nfi-068516	Neosartorya fischeri	66.06	0.00e+00	823.00
IUUC-Ncr-068767	Neurospora crassa	74.11	0.00e+00	970.00
IUUC-Opr-071084	Ochotona princeps	42.23	1.00e-53	202.00
IUUC-Ont-071614	Oreochromis niloticus	43.04	7.00e-152	529.00
IUUC-Oba-075980	Oryza barthii	40.03	2.00e-118	418.00
IUUC-Obr-076799	Oryza brachyantha	42.09	1.00e-133	468.00
IUUC-Ogl-077134	Oryza glaberrima	42.41	3.00e-130	457.00
IUUC-Ogu-078655	Oryza glumaepatula	40.66	4.00e-122	430.00
IUUC-Oin-079654	Oryza indica	42.41	6.00e-130	456.00
IUUC-Olo-080706	Oryza longistaminata	40.35	3.00e-119	421.00
IUUC-Ome-081716	Oryza meridionalis	42.44	3.00e-67	248.00
IUUC-Oni-082508	Oryza nivara	39.56	2.00e-116	411.00
IUUC-Opu-083707	Oryza punctata	40.19	2.00e-117	414.00
IUUC-Oru-084453	Oryza rufipogon	40.35	3.00e-119	421.00
IUUC-Osa-085811	Oryza sativa	42.25	6.00e-130	456.00
IUUC-Ola-087361	Oryzias latipes	42.53	6.00e-153	533.00
IUUC-Oga-088015	Otolemur garnettii	42.05	1.00e-147	515.00
IUUC-Oar-090058	Ovis aries	51.79	5.00e-50	190.00
IUUC-Ptr-090631	Pan troglodytes	41.16	1.00e-56	211.00
IUUC-Pan-092306	Papio anubis	42.50	1.00e-147	515.00
IUUC-Pma-094622	Petromyzon marinus	42.61	7.00e-153	532.00
IUUC-Pno-094794	Phaeosphaeria nodorum	66.97	0.00e+00	897.00
IUUC-Ppa-095528	Physcomitrella patens	37.94	4.00e-79	287.00
IUUC-Pfo-096682	Poecilia formosa	42.86	2.00e-156	544.00
IUUC-Pab-097939	Pongo abelii	42.49	4.00e-133	466.00
IUUC-Pop-099530	Populus trichocarpa	42.27	2.00e-120	424.00
IUUC-Pca-100333	Procavia capensis	42.25	7.00e-143	499.00
IUUC-Ppe-102078	Prunus persica	42.36	5.00e-132	463.00
IUUC-Pgr-103525	Puccinia graminis	47.90	3.00e-164	570.00
IUUC-Ptt-103929	Puccinia triticina	47.55	2.00e-158	551.00
IUUC-Pte-104029	Pyrenophora teres	70.68	0.00e+00	992.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	69.47	0.00e+00	992.00
IUUC-Rno-105248	Rattus norvegicus	42.25	9.00e-145	505.00
IUUC-Sce-106381	Saccharomyces cerevisiae	53.08	0.00e+00	731.00
IUUC-Sha-106519	Sarcophilus harrisii	43.26	2.00e-152	531.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	46.42	6.00e-166	576.00
IUUC-Spo-108071	Schizosaccharomyces pombe	45.15	7.00e-155	539.00
IUUC-Smo-109604	Selaginella moellendorffii	41.86	5.00e-122	430.00
IUUC-Sit-110551	Setaria italica	42.43	3.00e-134	470.00
IUUC-Sly-110970	Solanum lycopersicum	43.10	4.00e-69	253.00
IUUC-Stu-112593	Solanum tuberosum	42.18	2.00e-137	481.00
IUUC-Sar-113123	Sorex araneus	40.72	7.00e-62	229.00
IUUC-Sbi-113945	Sorghum bicolor	41.96	3.00e-135	473.00
IUUC-Sre-115188	Sporisorium reilianum	45.95	1.00e-169	588.00
IUUC-Ssc-115352	Sus scrofa	42.45	2.00e-147	514.00
IUUC-Tru-117685	Takifugu rubripes	44.31	2.00e-159	555.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.67	5.00e-151	526.00
IUUC-Tca-121664	Theobroma cacao	41.95	1.00e-138	484.00
IUUC-Tre-122229	Trichoderma reesei	72.70	0.00e+00	900.00
IUUC-Tvi-122576	Trichoderma virens	73.69	0.00e+00	914.00
IUUC-Tae-124110	Triticum aestivum	41.32	1.00e-125	441.00
IUUC-Tur-126781	Triticum urartu	38.65	1.00e-106	379.00
IUUC-Tme-127080	Tuber melanosporum	66.56	0.00e+00	898.00
IUUC-Ttr-128514	Tursiops truncatus	38.85	1.00e-86	312.00
IUUC-Uma-129556	Ustilago maydis	45.30	3.00e-163	567.00
IUUC-Vda-129715	Verticillium dahliae	74.00	0.00e+00	998.00
IUUC-Vvi-131211	Vitis vinifera	40.16	7.00e-125	439.00
IUUC-Xma-133883	Xiphophorus maculatus	42.70	1.00e-151	528.00
IUUC-Yli-134438	Yarrowia lipolytica	53.92	0.00e+00	706.00
IUUC-Zma-135341	Zea mays	37.57	9.00e-124	436.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence