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Tag Content
UUCD2 ID IUUC-Sbi-114469
UUCD1 version UUC-SoB-00654
Ensembl Protein ID Sb03g027390.1
UniProt Accession A0A1B6Q4M3; A0A1B6Q4M3_SORBI
Genbank Protein ID KXG32853.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000762
Gene Name SORBI_003G214700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb03g027390 Sb03g027390.1 Sb03g027390.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.30e-24 83.3 472 501
UBD/Beta-Prp 2.60e-44 152.4 470 715
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
    H+ +t+++f ++ t+l+++s D+t++vWD
   Q: 472 HSLLITDVRFsPGmTRLATSSFDKTVRVWD 501
    77789******999**************** PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
    ++h+ it+v fsp+ + lat+s d+t++vwd++++++ lr++ gh+a v +++f+p+++ i+ ++ +D+ ++ w++++g+cv ++ + ++ l
   Q: 470 EEHSLLITDVRFSPGMTRLATSSFDKTVRVWDADNPDYsLRTFTGHSASVMSLDFHPNKEdIICSCDSDGEVRCWSINNGSCVTCVRVFNGGATQL 565
    578999*******************************999999**************9888*********************************** PP
   S: 101 sfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvyslsfdsng 192
    +f+p +g++l+++s + i + d et q+ +++l+gh +++++v+++ gn+l+s s D+ vr+W+ + +++++l ++ +s f+++
   Q: 566 RFQPrQGKYLAAAS-EKGISILDAETLQVCRTPLQGHIQIIQSVCWDAAGNYLASVSEDS-VRVWSFtsgNDIECIHELNC-SGNKFHSCVFHPSY 658
    ****6667777777.899****************************************96.9*****44444479999987.99************ PP
   S: 193 kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
    + l+ +++ +++lwdl+++++v + n+h+ v +++s+ + +++s+s+D+ +++W
   Q: 659 PNLLIIGCYESLELWDLREKNTVTISNAHEGMVAALAASSASGLVASVSHDQLVKLW 715
    ********************************************************* PP
   

Organism Sorghum bicolor
Protein Sequence
(Fasta)
MSQTNWEADK MLDVYIYDYF VKRNLQATAK AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSDVAASYIE RTFFKPCGLV ICSSRCAMGR CGHAVPEANA NSMAAKMYEE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sbi-114469|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGCAGA CGAACTGGGA GGCGGATAAG ATGTGAGCGT GCATTGCCTG CTGTTTCCCG 60
ACGGTTTGAG ATGCTTGTTT TTTTTTCCTT TTGAAACGTT TTTTTTTCTA TTCTAGTGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sbi-114469|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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