iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113965

UUCD1 version

UUC-SoB-01729

Ensembl Protein ID

Sb03g035900.1

UniProt Accession

A0A1B6Q6C3; A0A1B6Q6C3_SORBI

Genbank Protein ID

KXG33469.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G310900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g035900	Sb03g035900.1	Sb03g035900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-51	176.2	184	430

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ +++++p+g++  +lq+lf +l ++ +++v+++el+k++++ +  +++++q+D+qE+ 
   Q: 184  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDTPSGNIPLALQSLFYKL-QHCDNSVATKELTKSFGWDS--YDSFMQHDVQELN 271
           6******************************.....555566799***************.89999************877..67*********** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           ++l ++le+++                      +  ++ +  +  i++lF+g+  + i c + d++s+r+e+f+dl l+v+g +     ++  +++
   Q: 272  RVLCEKLENKM----------------------KVCHPRTPVEGAIQKLFEGHHMNYIECINVDSKSTRKESFYDLALDVKGCS-----DVYASFD 340
           ***********......................4456889999*****************************************.....9****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeL 280
           +++++e+leg+nky++e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++  + + ++++ Y L
   Q: 341  KYVAQERLEGDNKYQSEEH-GLQDAKKGMLFIDFPPVLQLQLKRFEYDFVRDTMLKINDRYEFPLQLDLDrddgKYLSP-DADRSVRNLYTL 430
           ***************9996.79***********************************************9665555554.333445666655 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLVPHQDAIE GPQQDVVEGP QPMEAASAVE NQLVPDTSTS RFTWCIENFS RRNVRKHYSD 60
DFIVGGYKWR VLVFPRGNNG DHLSMYLDVA DSNLLPPGWS RNAQFSLAVV NQLDSKASLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGTCC CGCATCAGGA TGCCATTGAG GGGCCGCAGC AGGATGTTGT TGAGGGTCCG 60
CAGCCGATGG AAGGTGAGCT TTTTAGTTGT CATTTGACCT TGCATCTATT GGAGTTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR029071--Ubiquitin-rel_dom
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence