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Tag Content
UUCD2 ID IUUC-Zma-135921
UUCD1 version UUC-ZeM-00744
Ensembl Protein ID Zm00001d012620_T025
UniProt Accession A0A1D6GA50; A0A1D6GA50_MAIZE
Genbank Protein ID AQK99965.1
Protein Name Katanin p80 WD40 repeat-containing subunit B1 homolog
Genbank Nucleotide ID CM000784
Gene Name ZEAMMB73_Zm00001d012620
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d012620 Zm00001d012620_T014 Zm00001d012620_T014
Zm00001d012620 Zm00001d012620_T012 Zm00001d012620_T012
Zm00001d012620 Zm00001d012620_T013 Zm00001d012620_T013
Zm00001d012620 Zm00001d012620_T021 Zm00001d012620_T021
Zm00001d012620 Zm00001d012620_T022 Zm00001d012620_T022
Zm00001d012620 Zm00001d012620_T002 Zm00001d012620_T002
Zm00001d012620 Zm00001d012620_T006 Zm00001d012620_T006
Zm00001d012620 Zm00001d012620_T003 Zm00001d012620_T003
Zm00001d012620 Zm00001d012620_T025 Zm00001d012620_T025
Zm00001d012620 Zm00001d012620_T015 Zm00001d012620_T015
Zm00001d012620 Zm00001d012620_T024 Zm00001d012620_T024
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.10e-36 123.8 185 220
UBD/Beta-Prp 2.80e-58 199.5 12 185
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
    H++ ++c++f + ll++Gs D t+k WDl t+ l
   Q: 185 HSGQINCIDFhPQeFLLATGSADRTVKFWDLETFEL 220
    9*********9665889**************99876 PP
   


   UBD/Beta-Prp

   S: 89   tlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
    + +h+++v+sls+ + s+ ++++G++dr +++w + +++ l tlsgh+++v v++++ + l+ +Gs ++ ++lWdl+ +k++r ltg
   Q: 12 NFVAHDAEVRSLSIGKkSRRVFITGGNDRKVKLWAIGKQTPLL-TLSGHTSAVEAVQFDSAEVLVLAGSSNGSIKLWDLEEAKVVRSLTG 100
    5678************666************************.*********************************************9 PP
   S: 178 ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
    h +s + ++f++ g++++sgs d+++k+wd++++ ++t++gh+ +k +rf+p++ ++v+g++D+ +++Wdl+ g+ll+ ++ h
   Q: 101 -HRSSCTAVEFHPFGEFFASGSSDTDLKIWDIKKKGYIHTYKGHRGAIKTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLHDFKFH 185
    .*******************************************************************************999765 PP
   

Organism Zea mays
Functional Description
(View)

Functional Description



     May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
Protein Sequence
(Fasta)
MDPEKRGYEL QNFVAHDAEV RSLSIGKKSR RVFITGGNDR KVKLWAIGKQ TPLLTLSGHT 60
SAVEAVQFDS AEVLVLAGSS NGSIKLWDLE EAKVVRSLTG HRSSCTAVEF HPFGEFFASG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Zma-135921|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTCCACCCC TCTCGTTTTC ACTGCCCAGA GACCACCAAA GGAAAAAAAG GGGACTCGCT 60
CTCGCCAACT CCCCTGCTCC ACAGCCACAA GCCCACTCGG ATCCCAATCC GAGCCCTACT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Zma-135921|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000869 Aegilops tauschii 67.30 0.00e+00 1106.00
IUUC-Bdi-014531 Brachypodium distachyon 76.78 0.00e+00 1261.00
IUUC-Hvu-047729 Hordeum vulgare 75.50 0.00e+00 929.00
IUUC-Mac-065245 Musa acuminata 52.73 0.00e+00 630.00
IUUC-Oba-075016 Oryza barthii 74.27 0.00e+00 1127.00
IUUC-Obr-076138 Oryza brachyantha 78.92 0.00e+00 1355.00
IUUC-Ogl-077401 Oryza glaberrima 78.21 0.00e+00 1330.00
IUUC-Ogu-078062 Oryza glumaepatula 73.39 0.00e+00 1254.00
IUUC-Oin-080042 Oryza indica 73.27 0.00e+00 1252.00
IUUC-Olo-080713 Oryza longistaminata 77.21 0.00e+00 1173.00
IUUC-Ome-081192 Oryza meridionalis 74.20 0.00e+00 1087.00
IUUC-Oni-082473 Oryza nivara 73.33 0.00e+00 1243.00
IUUC-Opu-083293 Oryza punctata 70.43 0.00e+00 1155.00
IUUC-Oru-085183 Oryza rufipogon 73.16 0.00e+00 1250.00
IUUC-Osa-085801 Oryza sativa 78.21 0.00e+00 1328.00
IUUC-Pop-100006 Populus trichocarpa 47.50 6.00e-156 544.00
IUUC-Sit-110364 Setaria italica 86.21 0.00e+00 1375.00
IUUC-Sbi-114389 Sorghum bicolor 83.47 0.00e+00 1397.00
IUUC-Tca-121590 Theobroma cacao 47.93 1.00e-149 523.00
IUUC-Tae-125511 Triticum aestivum 77.06 0.00e+00 1265.00
IUUC-Tur-126181 Triticum urartu 71.91 0.00e+00 1175.00
Created Date 25-Jun-2017

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