iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098424

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01223122

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000025865.2	ENSPPYT00000029344.2	ENSPPYP00000023494.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.90e-09	35.8	132	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 132  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 177
           ********55553322255788*********9......4559*********8 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MSTRKRRGGA INSRQAQKRT REATSTPEIS LEAEPIELVE TAGDEIVDLT CESLEPVVVD 60
LTHNDSVVIV DERRRPRRNA RRLPQDHADS CVVSSDDEEL SRDRDVYVTT HTPRNARDEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGCCAAT GGGGACATGA CGGGGGGCGG AGCCGAGGCC TCCGAAGCGG AAGTGGGTTG 60
CTGTTGAGGC GGCGGCGTCT TTCTCGAGGG GCTCTCCTGG GCTTCTGAAG AAGGAGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

KEGG

pon:100438954

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	39.34	1.00e-10	59.70
IUUC-Aml-002206	Ailuropoda melanoleuca	93.05	2.00e-84	304.00
IUUC-Atr-002771	Amborella trichopoda	33.33	2.00e-09	55.80
IUUC-Apl-004120	Anas platyrhynchos	70.92	9.00e-71	259.00
IUUC-Aca-004236	Anolis carolinensis	63.16	8.00e-61	226.00
IUUC-Ame-011555	Astyanax mexicanus	50.93	1.00e-36	145.00
IUUC-Bta-012913	Bos taurus	86.32	5.00e-86	309.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	1.00e-10	60.10
IUUC-Bol-016418	Brassica oleracea	37.70	4.00e-09	55.10
IUUC-Bra-016890	Brassica rapa	36.84	8.00e-08	50.10
IUUC-Cel-018585	Caenorhabditis elegans	33.33	2.00e-08	52.40
IUUC-Cja-019151	Callithrix jacchus	95.29	7.00e-87	312.00
IUUC-Cfa-020868	Canis familiaris	90.00	5.00e-81	293.00
IUUC-Cpo-022249	Cavia porcellus	86.63	2.00e-73	267.00
IUUC-Csa-024125	Chlorocebus sabaeus	97.89	3.00e-91	327.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.30
IUUC-Csv-026318	Ciona savignyi	40.98	6.00e-13	67.40
IUUC-Dre-028145	Danio rerio	43.75	1.00e-32	132.00
IUUC-Dno-029605	Dasypus novemcinctus	92.63	2.00e-94	337.00
IUUC-Dor-030898	Dipodomys ordii	86.84	6.00e-89	319.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	1.00e-10	60.50
IUUC-Ete-032694	Echinops telfairi	83.42	4.00e-71	259.00
IUUC-Eca-033443	Equus caballus	94.21	6.00e-87	312.00
IUUC-Eeu-034603	Erinaceus europaeus	94.17	2.00e-55	207.00
IUUC-Fca-035507	Felis catus	91.98	2.00e-81	294.00
IUUC-Fal-037382	Ficedula albicollis	67.86	5.00e-64	236.00
IUUC-Gmo-038960	Gadus morhua	71.43	6.00e-19	85.90
IUUC-Gga-040493	Gallus gallus	68.21	3.00e-67	247.00
IUUC-Gac-042194	Gasterosteus aculeatus	49.01	8.00e-36	142.00
IUUC-Ggo-044726	Gorilla gorilla	99.47	3.00e-92	330.00
IUUC-Hsa-046212	Homo sapiens	99.47	3.00e-92	330.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	95.72	2.00e-85	307.00
IUUC-Lpe-050920	Leersia perrieri	34.57	4.00e-11	61.20
IUUC-Loc-051907	Lepisosteus oculatus	46.39	2.00e-35	141.00
IUUC-Laf-054145	Loxodonta africana	90.37	1.00e-80	291.00
IUUC-Mcc-055689	Macaca mulatta	98.42	4.00e-91	326.00
IUUC-Meu-056654	Macropus eugenii	46.52	1.00e-39	155.00
IUUC-Mla-058874	Melampsora laricipopulina	35.85	1.00e-04	41.20
IUUC-Mga-059303	Meleagris gallopavo	69.90	7.00e-70	256.00
IUUC-Mmr-061355	Microcebus murinus	96.32	1.00e-88	318.00
IUUC-Mdo-062968	Monodelphis domestica	65.61	9.00e-66	242.00
IUUC-Mmu-064421	Mus musculus	90.91	4.00e-92	330.00
IUUC-Mac-064573	Musa acuminata	31.68	6.00e-12	64.70
IUUC-Mpu-066522	Mustela putorius furo	93.05	2.00e-84	304.00
IUUC-Mlu-067065	Myotis lucifugus	89.30	7.00e-81	292.00
IUUC-Nle-069198	Nomascus leucogenys	97.89	7.00e-91	325.00
IUUC-Opr-071141	Ochotona princeps	88.77	3.00e-87	313.00
IUUC-Oan-073341	Ornithorhynchus anatinus	65.99	7.00e-36	142.00
IUUC-Ocu-073787	Oryctolagus cuniculus	95.72	3.00e-95	340.00
IUUC-Oba-075460	Oryza barthii	40.32	4.00e-11	61.60
IUUC-Obr-076349	Oryza brachyantha	37.70	8.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	37.97	1.00e-12	66.20
IUUC-Ogu-078677	Oryza glumaepatula	40.32	3.00e-11	61.60
IUUC-Oin-079992	Oryza indica	37.97	1.00e-12	66.20
IUUC-Olo-080257	Oryza longistaminata	41.94	3.00e-11	62.00
IUUC-Ome-081943	Oryza meridionalis	37.97	1.00e-12	66.60
IUUC-Oni-082671	Oryza nivara	40.32	4.00e-11	61.60
IUUC-Opu-083644	Oryza punctata	40.32	6.00e-11	60.80
IUUC-Oru-084650	Oryza rufipogon	40.32	4.00e-11	61.60
IUUC-Osa-086110	Oryza sativa	37.97	1.00e-12	66.20
IUUC-Ola-086970	Oryzias latipes	42.35	2.00e-33	135.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	2.00e-10	58.20
IUUC-Oga-088242	Otolemur garnettii	96.26	3.00e-96	343.00
IUUC-Oar-089469	Ovis aries	88.24	1.00e-90	324.00
IUUC-Pan-092776	Papio anubis	98.42	4.00e-91	326.00
IUUC-Psi-093929	Pelodiscus sinensis	70.05	1.00e-67	248.00
IUUC-Pma-094118	Petromyzon marinus	48.28	4.00e-21	92.00
IUUC-Ppa-095567	Physcomitrella patens	44.26	2.00e-11	62.40
IUUC-Pfo-097412	Poecilia formosa	47.83	5.00e-34	136.00
IUUC-Pca-100463	Procavia capensis	84.40	2.00e-50	191.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-09	54.70
IUUC-Rno-105460	Rattus norvegicus	90.48	5.00e-82	296.00
IUUC-Sha-107487	Sarcophilus harrisii	70.37	3.00e-67	247.00
IUUC-Sit-109959	Setaria italica	36.07	3.00e-05	42.40
IUUC-Sar-113601	Sorex araneus	88.24	2.00e-78	284.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	8.00e-05	40.40
IUUC-Ssc-115911	Sus scrofa	93.68	4.00e-86	310.00
IUUC-Tgu-117264	Taeniopygia guttata	68.78	4.00e-62	230.00
IUUC-Tru-117663	Takifugu rubripes	47.90	2.00e-36	144.00
IUUC-Tsy-118883	Tarsius syrichta	88.51	1.00e-67	248.00
IUUC-Tae-124035	Triticum aestivum	39.34	1.00e-10	60.10
IUUC-Tur-126408	Triticum urartu	39.34	1.00e-10	59.70
IUUC-Ttr-128950	Tursiops truncatus	65.26	1.00e-65	242.00
IUUC-Vvi-130833	Vitis vinifera	40.32	3.00e-10	58.50
IUUC-Xtr-132879	Xenopus tropicalis	60.39	1.00e-39	154.00
IUUC-Xma-133319	Xiphophorus maculatus	46.94	1.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence