iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017888

Ensembl Protein ID

Bra039168.1-P

UniProt Accession

M4FDJ7; M4FDJ7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039168	Bra039168.1	Bra039168.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.3	176	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  +++ +v+ C H+fh+ C++ w        ++ +CP+C
   Q: 176  CPTCLEEYtsENPKIVTKCSHHFHLGCIYEW------MERSENCPVC 216
           ********8777556799*************......999999**** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGCVTSCFRV QDIDEYMNPN SSVYRNCPCI RCLARNFLNL YVSVFGRGET RALPSSVQAT 60
TPSITSSSSH DNFLSEAFRS TPRPLPYDAD PRHFRSLVSR REKGSSHSHE EAEPLRSDSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATGTG TTACTTCTTG CTTTCGAGTC CAAGACATTG ATGAGTACAT GAATCCAAAT 60
AGCTCTGTAT ATAGGAACTG TCCCTGCATA AGATGCCTTG CTCGTAACTT CCTTAACCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000479	Aegilops tauschii	47.83	8.00e-31	126.00
IUUC-Atr-003101	Amborella trichopoda	50.44	2.00e-45	175.00
IUUC-Aly-005552	Arabidopsis lyrata	83.26	3.00e-91	327.00
IUUC-Ath-006602	Arabidopsis thaliana	82.89	5.00e-92	330.00
IUUC-Bci-013799	Botrytis cinerea	38.30	1.00e-06	47.40
IUUC-Bdi-014798	Brachypodium distachyon	45.98	1.00e-39	155.00
IUUC-Bol-016572	Brassica oleracea	98.63	1.00e-127	448.00
IUUC-Gma-043590	Glycine max	61.33	2.00e-73	268.00
IUUC-Hvu-047238	Hordeum vulgare	43.86	2.00e-42	164.00
IUUC-Lpe-051120	Leersia perrieri	47.98	1.00e-36	147.00
IUUC-Mtr-058095	Medicago truncatula	58.22	3.00e-69	254.00
IUUC-Mac-064735	Musa acuminata	45.95	2.00e-49	188.00
IUUC-Oba-075895	Oryza barthii	43.95	5.00e-40	157.00
IUUC-Ogl-077082	Oryza glaberrima	43.95	5.00e-40	157.00
IUUC-Ogu-078357	Oryza glumaepatula	46.91	3.00e-37	147.00
IUUC-Olo-080533	Oryza longistaminata	43.43	1.00e-33	137.00
IUUC-Ome-081642	Oryza meridionalis	43.36	1.00e-40	159.00
IUUC-Pop-099578	Populus trichocarpa	57.78	2.00e-59	221.00
IUUC-Ppe-101573	Prunus persica	58.67	6.00e-67	246.00
IUUC-Sit-109989	Setaria italica	43.30	2.00e-41	162.00
IUUC-Sly-111198	Solanum lycopersicum	60.27	1.00e-60	225.00
IUUC-Sbi-113909	Sorghum bicolor	40.62	1.00e-38	152.00
IUUC-Tca-121439	Theobroma cacao	56.44	3.00e-59	221.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence