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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006629
Ensembl Protein ID AT3G62770.1
UniProt Accession Q93VB2; Q3EAF7; Q9LZI8; AT18A_ARATH
Genbank Protein ID CAB83127.1; AEE80389.1; AAK62600.1; AAL15394.1
Protein Name Autophagy-related protein 18a; Protein PEROXISOME UNUSUAL POSITIONING 2
Genbank Nucleotide ID AL162651; CP002686; AY039545; AY059169
Gene Name ATG18A; PEUP2; At3g62770; F26K9_200
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G62770 AT3G62770.1 AT3G62770.1
AT3G62770 AT3G62770.3 AT3G62770.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.10e-10 40.4 247 283
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtgvl 35
           H +++ c+a+ +d +ll+++s  gt ++++++ +g+l
   Q: 247  HDSRIACFALtQDgHLLATASSKGTlVRIFNTVDGTL 283
           99*********88899***************999976 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy by autophagosome formation during nutrient deprivation, senescence and under abiotic stresses, including oxidative, high salt and osmotic stress conditions. Cooperates with jasmonate- and WRKY33-mediated signaling pathways in the regulation of plant defense responses to necrotrophic pathogens.
 The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy by autophagosome formation during nutrient deprivation, senescence and under abiotic stresses, including oxidative, high salt and osmotic stress conditions. Cooperates with jasmonate- and WRKY33-mediated signaling pathways in the regulation of plant defense responses to necrotrophic pathogens.
Protein Sequence
(Fasta)
MATVSSSSWP NPNPNPDSTS ASDSDSTFPS HRDRVDEPDS LDSFSSMSLN SDEPNQTSNQ 60
SPLSPPTPNL PVMPPPSVLH LSFNQDHACF AVGTDRGFRI LNCDPFREIF RRDFDRGGGV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006629|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTGAAAGATA TATGACGGCA GGCAACAAGC AAAGCACGAA GTCATCTTCT TCCTATTTCT 60
TCTATTCCTC CTTCTCCACG CTTCTTCTTC TTCTTCCTCA ATCTCTCTTA CGATTCCTTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006629|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0472--Membrane
KW-0539--Nucleus
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0926--Vacuole
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0034045--C:pre-autophagosomal structure membrane
GO:0005774--C:vacuolar membrane
GO:0006914--P:autophagy
GO:0050832--P:defense response to fungus
GO:0010150--P:leaf senescence
GO:0010508--P:positive regulation of autophagy
GO:0015031--P:protein transport
GO:0006970--P:response to osmotic stress
GO:0006979--P:response to oxidative stress
GO:0009651--P:response to salt stress
GO:0042594--P:response to starvation
GO:0009414--P:response to water deprivation
KEGG ath:AT3G62770
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001504 Ailuropoda melanoleuca 43.57 6.00e-62 230.00
IUUC-Aca-004629 Anolis carolinensis 43.11 3.00e-60 224.00
IUUC-Aly-006357 Arabidopsis lyrata 96.03 0.00e+00 657.00
IUUC-Ame-011233 Astyanax mexicanus 43.02 7.00e-61 226.00
IUUC-Bta-012842 Bos taurus 42.98 7.00e-62 229.00
IUUC-Bdi-014719 Brachypodium distachyon 72.93 5.00e-141 493.00
IUUC-Bol-015119 Brassica oleracea 90.36 0.00e+00 670.00
IUUC-Bra-017319 Brassica rapa 86.01 0.00e+00 635.00
IUUC-Cja-018855 Callithrix jacchus 43.04 5.00e-55 207.00
IUUC-Cpo-021981 Cavia porcellus 43.57 5.00e-62 230.00
IUUC-Cre-022613 Chlamydomonas reinhardtii 34.39 1.00e-33 136.00
IUUC-Csa-023140 Chlorocebus sabaeus 43.57 5.00e-62 230.00
IUUC-Cin-025655 Ciona intestinalis 42.77 8.00e-58 216.00
IUUC-Csv-025977 Ciona savignyi 40.73 3.00e-62 231.00
IUUC-Dre-028091 Danio rerio 42.73 7.00e-61 226.00
IUUC-Dno-029987 Dasypus novemcinctus 43.86 3.00e-62 231.00
IUUC-Dor-030931 Dipodomys ordii 34.44 1.00e-53 202.00
IUUC-Dse-031215 Dothistroma septosporum 30.48 2.00e-34 139.00
IUUC-Dme-031881 Drosophila melanogaster 42.90 5.00e-62 230.00
IUUC-Eca-033323 Equus caballus 43.34 1.00e-57 216.00
IUUC-Eeu-034479 Erinaceus europaeus 37.34 2.00e-30 125.00
IUUC-Fal-037218 Ficedula albicollis 43.14 1.00e-60 225.00
IUUC-Fox-037797 Fusarium oxysporum 35.04 2.00e-40 159.00
IUUC-Fso-038174 Fusarium solani 34.31 1.00e-38 153.00
IUUC-Gmo-038583 Gadus morhua 36.52 1.00e-56 213.00
IUUC-Ggr-039909 Gaeumannomyces graminis 41.77 1.00e-48 186.00
IUUC-Gga-040977 Gallus gallus 43.06 2.00e-61 228.00
IUUC-Gac-042096 Gasterosteus aculeatus 42.47 1.00e-65 242.00
IUUC-Gma-043639 Glycine max 73.30 7.00e-155 539.00
IUUC-Ggo-045610 Gorilla gorilla 34.81 8.00e-56 210.00
IUUC-Hsa-046532 Homo sapiens 43.57 5.00e-62 230.00
IUUC-Hvu-047374 Hordeum vulgare 69.13 6.00e-139 486.00
IUUC-Itr-048277 Ictidomys tridecemlineatus 43.57 5.00e-62 230.00
IUUC-Lch-049800 Latimeria chalumnae 43.02 1.00e-62 232.00
IUUC-Lpe-051251 Leersia perrieri 71.16 7.00e-141 493.00
IUUC-Lma-053076 Leptosphaeria maculans 33.24 7.00e-45 173.00
IUUC-Mcc-055304 Macaca mulatta 43.04 5.00e-55 207.00
IUUC-Meu-056020 Macropus eugenii 38.36 5.00e-39 154.00
IUUC-Mpo-057416 Magnaporthe poae 41.70 2.00e-49 189.00
IUUC-Mtr-057850 Medicago truncatula 77.43 2.00e-151 528.00
IUUC-Mla-058885 Melampsora laricipopulina 36.21 1.00e-37 148.00
IUUC-Mga-060051 Meleagris gallopavo 41.79 2.00e-57 215.00
IUUC-Mvi-060462 Microbotryum violaceum 38.89 3.00e-48 185.00
IUUC-Mmr-061076 Microcebus murinus 41.04 3.00e-55 207.00
IUUC-Mdo-062465 Monodelphis domestica 43.06 7.00e-61 226.00
IUUC-Mmu-063289 Mus musculus 43.57 8.00e-62 229.00
IUUC-Mac-065043 Musa acuminata 68.41 3.00e-128 451.00
IUUC-Mpu-066052 Mustela putorius furo 43.16 5.00e-58 217.00
IUUC-Mlu-067972 Myotis lucifugus 43.57 3.00e-62 231.00
IUUC-Nle-069047 Nomascus leucogenys 43.62 4.00e-61 227.00
IUUC-Ont-071875 Oreochromis niloticus 42.73 4.00e-67 247.00
IUUC-Ocu-074736 Oryctolagus cuniculus 39.21 1.00e-48 186.00
IUUC-Oba-075529 Oryza barthii 71.35 2.00e-135 476.00
IUUC-Obr-076316 Oryza brachyantha 75.92 2.00e-123 434.00
IUUC-Ogl-077403 Oryza glaberrima 72.68 3.00e-139 488.00
IUUC-Ogu-078223 Oryza glumaepatula 72.68 3.00e-139 487.00
IUUC-Oin-079580 Oryza indica 72.68 3.00e-139 488.00
IUUC-Olo-080794 Oryza longistaminata 68.07 1.00e-135 476.00
IUUC-Ome-081736 Oryza meridionalis 72.29 2.00e-136 478.00
IUUC-Oni-082413 Oryza nivara 72.68 3.00e-139 487.00
IUUC-Opu-083356 Oryza punctata 72.14 2.00e-140 491.00
IUUC-Oru-084972 Oryza rufipogon 72.68 3.00e-139 488.00
IUUC-Osa-085644 Oryza sativa 72.68 3.00e-139 488.00
IUUC-Ola-086628 Oryzias latipes 42.44 1.00e-67 248.00
IUUC-Olu-087808 Ostreococcus lucimarinus 52.01 6.00e-96 343.00
IUUC-Oga-088642 Otolemur garnettii 43.57 5.00e-62 230.00
IUUC-Oar-089538 Ovis aries 42.51 2.00e-57 215.00
IUUC-Ptr-091326 Pan troglodytes 43.57 5.00e-62 230.00
IUUC-Pan-091795 Papio anubis 43.57 5.00e-62 230.00
IUUC-Pma-094403 Petromyzon marinus 37.39 6.00e-57 213.00
IUUC-Pno-094851 Phaeosphaeria nodorum 30.50 7.00e-41 160.00
IUUC-Ppa-095480 Physcomitrella patens 59.53 9.00e-117 412.00
IUUC-Pfo-096099 Poecilia formosa 42.73 4.00e-67 247.00
IUUC-Pab-098681 Pongo abelii 43.57 5.00e-62 230.00
IUUC-Pop-099760 Populus trichocarpa 81.92 2.00e-171 594.00
IUUC-Ppe-101963 Prunus persica 79.95 1.00e-164 571.00
IUUC-Pva-103006 Pteropus vampyrus 43.48 1.00e-57 216.00
IUUC-Pte-104115 Pyrenophora teres 30.88 2.00e-40 159.00
IUUC-Pyt-104738 Pyrenophora triticirepentis 29.71 2.00e-38 152.00
IUUC-Rno-106112 Rattus norvegicus 43.57 8.00e-62 229.00
IUUC-Sce-106327 Saccharomyces cerevisiae 29.50 1.00e-32 133.00
IUUC-Sha-107573 Sarcophilus harrisii 43.06 7.00e-61 226.00
IUUC-Sit-110655 Setaria italica 74.29 5.00e-142 496.00
IUUC-Sly-110866 Solanum lycopersicum 64.56 6.00e-136 476.00
IUUC-Stu-111954 Solanum tuberosum 71.25 1.00e-152 531.00
IUUC-Sar-113276 Sorex araneus 37.64 3.00e-28 117.00
IUUC-Sbi-114057 Sorghum bicolor 71.03 5.00e-139 486.00
IUUC-Sre-115219 Sporisorium reilianum 34.12 2.00e-38 152.00
IUUC-Ssc-116163 Sus scrofa 43.27 2.00e-61 228.00
IUUC-Tgu-116488 Taeniopygia guttata 42.22 5.00e-56 210.00
IUUC-Tru-118329 Takifugu rubripes 43.02 3.00e-75 274.00
IUUC-Tni-119729 Tetraodon nigroviridis 41.11 3.00e-69 254.00
IUUC-Tca-121459 Theobroma cacao 79.21 2.00e-148 518.00
IUUC-Tae-124634 Triticum aestivum 69.02 6.00e-139 486.00
IUUC-Ttr-128940 Tursiops truncatus 43.00 7.00e-50 189.00
IUUC-Uma-129438 Ustilago maydis 35.13 2.00e-33 136.00
IUUC-Vvi-131053 Vitis vinifera 78.72 9.00e-163 565.00
IUUC-Xtr-131806 Xenopus tropicalis 44.14 2.00e-63 235.00
IUUC-Xma-134275 Xiphophorus maculatus 42.73 4.00e-67 247.00
IUUC-Yli-134566 Yarrowia lipolytica 36.03 2.00e-51 195.00
IUUC-Zma-135090 Zea mays 70.94 3.00e-136 477.00
Created Date 25-Jun-2017

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