iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114386

Ensembl Protein ID

Sb03g047370.1

UniProt Accession

A0A1B6PMY8; A0A1B6PMY8_SORBI

Genbank Protein ID

KXG27036.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G202100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g047370	Sb03g047370.1	Sb03g047370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-22	79.2	297	332
E3 adaptor/Cullin RING/APC_C/CDC20	1.40e-140	468.6	163	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v++l++ +d + l+sG++D+++ vW+ r++ 
   Q: 297  GHRSEVCGLKWsHDdRELASGGNDNQLLVWNQRSQQ 332
           8***********55599**************88775 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghs 96
           p+kvldap+l+ddfylnL+dWss+nvlav+Lg++vylwsa++++v+kl+dl ++d+v++v+w++eg++l++Gt  g v+i+D +++k++r++ gh+
   Q: 163  PHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPRDSVCAVHWSREGSYLSIGTGLGDVQIWDSSRCKRIRNMGGHQ 258
           689********************************************************************************************* PP
   S: 97   arvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqk 192
           +r g L+W +++lssGsrd++il++d+rv+   +s++ +h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ + +eh+aavkaiawsP+q+
   Q: 259  TRTGVLAWSSCILSSGSRDKNILQHDIRVPSDYISKFCGHRSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLQLTEHTAAVKAIAWSPHQQ 354
           ************************************************************************************************ PP
   S: 193  slLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagD 288
           +lLasGGGtaDrci+fwnt++g++l++idtgsqvc+l+w k+ +elvsthG+++n+i++wkyps+skva+l+gh++Rvl+la spdg++ivt+agD
   Q: 355  GLLASGGGTADRCIRFWNTANGNVLNSIDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVATLTGHTMRVLYLASSPDGQTIVTGAGD 450
           ************************************************************************************************ PP
   S: 289  etlrfwklfdkkk 301
           etlrfw++f + k
   Q: 451  ETLRFWNIFPSVK 463
           *********8765 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTLAAPASDA KPRLNVPPSM AAALRLDPVG LGAGPSTPSP SRRLAEPPKT PSPSKTTYSD 60
RFIPCRSSSR LQNFALLDSP LSPAKDDTPY SRLLRAELFG PDSPKPATAA SASPNTNLFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGCTCG CGGCGCCGGC CTCGGACGCC AAGCCGCGCC TCAACGTGCC GCCGTCCATG 60
GCGGCCGCGC TCCGCCTCGA CCCCGTGGGG CTGGGGGCGG GGCCCTCGAC GCCGTCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	74.16	0.00e+00	671.00
IUUC-Aly-006009	Arabidopsis lyrata	74.02	0.00e+00	626.00
IUUC-Ath-007167	Arabidopsis thaliana	73.79	0.00e+00	626.00
IUUC-Acl-008269	Aspergillus clavatus	45.52	4.00e-128	451.00
IUUC-Afl-008432	Aspergillus flavus	46.46	2.00e-127	448.00
IUUC-Afu-008829	Aspergillus fumigatus	47.25	4.00e-127	447.00
IUUC-Ani-009471	Aspergillus nidulans	47.09	3.00e-129	454.00
IUUC-Aor-010118	Aspergillus oryzae	46.46	2.00e-127	448.00
IUUC-Ate-010534	Aspergillus terreus	45.25	4.00e-128	451.00
IUUC-Bgr-012013	Blumeria graminis	47.51	1.00e-123	436.00
IUUC-Bci-013807	Botrytis cinerea	49.09	2.00e-119	422.00
IUUC-Bdi-015033	Brachypodium distachyon	82.12	0.00e+00	756.00
IUUC-Bol-016159	Brassica oleracea	72.44	1.00e-178	618.00
IUUC-Bra-017745	Brassica rapa	72.27	6.00e-178	616.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	45.36	1.00e-102	365.00
IUUC-Cin-025327	Ciona intestinalis	53.81	7.00e-125	439.00
IUUC-Cgl-026631	Colletotrichum gloeosporioides	46.45	4.00e-124	437.00
IUUC-Cne-026933	Cryptococcus neoformans	62.69	1.00e-120	426.00
IUUC-Dor-030187	Dipodomys ordii	56.14	4.00e-123	434.00
IUUC-Dme-031858	Drosophila melanogaster	54.20	3.00e-128	451.00
IUUC-Ete-032562	Echinops telfairi	69.12	6.00e-84	303.00
IUUC-Fox-037814	Fusarium oxysporum	64.40	1.00e-121	428.00
IUUC-Fso-038420	Fusarium solani	49.79	7.00e-124	436.00
IUUC-Ggr-039774	Gaeumannomyces graminis	64.40	1.00e-122	432.00
IUUC-Gma-043563	Glycine max	68.38	0.00e+00	630.00
IUUC-Hvu-047486	Hordeum vulgare	91.19	1.00e-165	574.00
IUUC-Kpa-049239	Komagataella pastoris	44.09	2.00e-117	415.00
IUUC-Lpe-051568	Leersia perrieri	81.13	0.00e+00	694.00
IUUC-Meu-056276	Macropus eugenii	52.61	2.00e-117	414.00
IUUC-Mor-057113	Magnaporthe oryzae	50.32	3.00e-124	437.00
IUUC-Mpo-057599	Magnaporthe poae	64.40	9.00e-123	433.00
IUUC-Mtr-057760	Medicago truncatula	66.60	0.00e+00	635.00
IUUC-Mla-059048	Melampsora laricipopulina	46.19	9.00e-103	366.00
IUUC-Mga-060097	Meleagris gallopavo	50.84	1.00e-121	428.00
IUUC-Mmr-061151	Microcebus murinus	49.45	4.00e-106	377.00
IUUC-Mmu-063731	Mus musculus	53.28	6.00e-131	459.00
IUUC-Mac-064942	Musa acuminata	74.84	0.00e+00	717.00
IUUC-Mpu-066173	Mustela putorius furo	53.40	4.00e-131	460.00
IUUC-Mlu-068030	Myotis lucifugus	54.15	6.00e-131	459.00
IUUC-Nfi-068536	Neosartorya fischeri	45.32	2.00e-127	448.00
IUUC-Ont-071725	Oreochromis niloticus	52.74	2.00e-128	451.00
IUUC-Oba-075417	Oryza barthii	85.86	0.00e+00	626.00
IUUC-Obr-076033	Oryza brachyantha	88.15	0.00e+00	744.00
IUUC-Ogl-077441	Oryza glaberrima	83.84	0.00e+00	761.00
IUUC-Ogu-078877	Oryza glumaepatula	81.72	0.00e+00	740.00
IUUC-Oin-079461	Oryza indica	82.34	0.00e+00	713.00
IUUC-Olo-080716	Oryza longistaminata	81.90	0.00e+00	689.00
IUUC-Ome-081663	Oryza meridionalis	82.98	0.00e+00	729.00
IUUC-Oni-083097	Oryza nivara	81.60	0.00e+00	727.00
IUUC-Opu-083464	Oryza punctata	81.72	0.00e+00	730.00
IUUC-Oru-084848	Oryza rufipogon	81.60	0.00e+00	727.00
IUUC-Osa-085451	Oryza sativa	83.84	0.00e+00	761.00
IUUC-Ola-086983	Oryzias latipes	53.23	4.00e-129	453.00
IUUC-Ppa-095366	Physcomitrella patens	62.60	4.00e-178	616.00
IUUC-Pop-099953	Populus trichocarpa	74.65	0.00e+00	646.00
IUUC-Pca-100565	Procavia capensis	53.80	1.00e-129	455.00
IUUC-Ppe-101285	Prunus persica	70.33	0.00e+00	629.00
IUUC-Pva-102602	Pteropus vampyrus	53.91	4.00e-126	444.00
IUUC-Pgr-103466	Puccinia graminis	48.50	9.00e-108	383.00
IUUC-Ptt-103888	Puccinia triticina	55.59	7.00e-97	347.00
IUUC-Pte-104097	Pyrenophora teres	45.61	8.00e-125	439.00
IUUC-Pyt-104445	Pyrenophora triticirepentis	42.83	7.00e-106	377.00
IUUC-Rno-105028	Rattus norvegicus	53.28	2.00e-131	461.00
IUUC-Sha-106538	Sarcophilus harrisii	50.23	7.00e-117	413.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	47.82	3.00e-112	397.00
IUUC-Spo-108056	Schizosaccharomyces pombe	46.36	3.00e-108	384.00
IUUC-Ssl-108391	Sclerotinia sclerotiorum	50.41	2.00e-121	428.00
IUUC-Smo-109041	Selaginella moellendorffii	63.68	7.00e-176	609.00
IUUC-Sit-110550	Setaria italica	91.46	0.00e+00	863.00
IUUC-Sly-111395	Solanum lycopersicum	67.53	0.00e+00	637.00
IUUC-Stu-112356	Solanum tuberosum	67.73	0.00e+00	650.00
IUUC-Sre-115222	Sporisorium reilianum	62.77	9.00e-122	429.00
IUUC-Tsy-118931	Tarsius syrichta	38.41	3.00e-58	218.00
IUUC-Tca-121682	Theobroma cacao	77.57	0.00e+00	652.00
IUUC-Tre-122249	Trichoderma reesei	49.50	4.00e-126	444.00
IUUC-Tvi-122675	Trichoderma virens	48.61	2.00e-125	441.00
IUUC-Tae-123028	Triticum aestivum	79.54	0.00e+00	738.00
IUUC-Tur-126545	Triticum urartu	81.70	2.00e-150	524.00
IUUC-Tbe-128056	Tupaia belangeri	61.32	4.00e-96	343.00
IUUC-Ttr-129055	Tursiops truncatus	54.53	5.00e-131	460.00
IUUC-Uma-129555	Ustilago maydis	62.46	1.00e-121	429.00
IUUC-Vda-130027	Verticillium dahliae	49.39	4.00e-124	437.00
IUUC-Vvi-131748	Vitis vinifera	71.49	0.00e+00	646.00
IUUC-Xtr-132808	Xenopus tropicalis	53.80	3.00e-133	467.00
IUUC-Yli-134584	Yarrowia lipolytica	62.85	4.00e-122	431.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence